Protein–RNA interactions for Protein: Q9Y5E7

PCDHB2, Protocadherin beta-2, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2Q9Y5E7 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.61□□□□□ -1.83
PCDHB2Q9Y5E7 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC3.61□□□□□ -1.83
PCDHB2Q9Y5E7 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.61□□□□□ -1.83
PCDHB2Q9Y5E7 AC012498.1-201ENST00000424037 437 ntBASIC3.61□□□□□ -1.83
PCDHB2Q9Y5E7 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.61□□□□□ -1.83
PCDHB2Q9Y5E7 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.61□□□□□ -1.83
PCDHB2Q9Y5E7 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.61□□□□□ -1.83
PCDHB2Q9Y5E7 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.61□□□□□ -1.83
PCDHB2Q9Y5E7 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.61□□□□□ -1.83
PCDHB2Q9Y5E7 AL671855.1-201ENST00000446875 1203 ntBASIC3.61□□□□□ -1.83
PCDHB2Q9Y5E7 AL162395.1-201ENST00000457882 422 ntBASIC3.61□□□□□ -1.83
PCDHB2Q9Y5E7 RNU7-180P-201ENST00000459240 63 ntBASIC3.61□□□□□ -1.83
PCDHB2Q9Y5E7 AC092185.1-201ENST00000491371 97 ntBASIC3.61□□□□□ -1.83
PCDHB2Q9Y5E7 AC117522.3-201ENST00000507974 584 ntBASIC3.61□□□□□ -1.83
PCDHB2Q9Y5E7 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.61□□□□□ -1.83
PCDHB2Q9Y5E7 NDUFB9P3-201ENST00000521269 501 ntBASIC3.61□□□□□ -1.83
PCDHB2Q9Y5E7 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.61□□□□□ -1.83
PCDHB2Q9Y5E7 CENPUP1-201ENST00000526649 1202 ntBASIC3.61□□□□□ -1.83
PCDHB2Q9Y5E7 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.61□□□□□ -1.83
PCDHB2Q9Y5E7 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
PCDHB2Q9Y5E7 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
PCDHB2Q9Y5E7 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.61□□□□□ -1.83
PCDHB2Q9Y5E7 MIR5004-201ENST00000579078 107 ntBASIC3.61□□□□□ -1.83
PCDHB2Q9Y5E7 AC008521.1-201ENST00000587471 187 ntBASIC3.61□□□□□ -1.83
PCDHB2Q9Y5E7 BNIP3P9-201ENST00000603714 553 ntBASIC3.61□□□□□ -1.83
PCDHB2Q9Y5E7 BNIP3P10-201ENST00000605360 577 ntBASIC3.61□□□□□ -1.83
PCDHB2Q9Y5E7 AC073657.2-201ENST00000605661 303 ntBASIC3.61□□□□□ -1.83
PCDHB2Q9Y5E7 AC008945.2-201ENST00000606056 604 ntBASIC3.61□□□□□ -1.83
PCDHB2Q9Y5E7 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.61□□□□□ -1.83
PCDHB2Q9Y5E7 PLCE1P1-201ENST00000622094 305 ntBASIC3.61□□□□□ -1.83
PCDHB2Q9Y5E7 AC009033.1-201ENST00000624279 431 ntBASIC3.61□□□□□ -1.83
PCDHB2Q9Y5E7 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.61□□□□□ -1.83
PCDHB2Q9Y5E7 AC007496.3-201ENST00000624987 3443 ntBASIC3.6□□□□□ -1.83
PCDHB2Q9Y5E7 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.6□□□□□ -1.83
PCDHB2Q9Y5E7 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PCDHB2Q9Y5E7 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.6□□□□□ -1.83
PCDHB2Q9Y5E7 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC3.6□□□□□ -1.83
PCDHB2Q9Y5E7 OR4G1P-203ENST00000641984 1631 ntBASIC3.6□□□□□ -1.83
PCDHB2Q9Y5E7 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PCDHB2Q9Y5E7 Y_RNA.72-201ENST00000362894 103 ntBASIC3.6□□□□□ -1.83
PCDHB2Q9Y5E7 RNA5SP374-201ENST00000362939 125 ntBASIC3.6□□□□□ -1.83
PCDHB2Q9Y5E7 AP002088.1-201ENST00000382740 395 ntBASIC3.6□□□□□ -1.83
PCDHB2Q9Y5E7 MIR514A1-201ENST00000385133 98 ntBASIC3.6□□□□□ -1.83
PCDHB2Q9Y5E7 RNU4-46P-201ENST00000410818 138 ntBASIC3.6□□□□□ -1.83
PCDHB2Q9Y5E7 RN7SKP140-201ENST00000411196 284 ntBASIC3.6□□□□□ -1.83
PCDHB2Q9Y5E7 AL513331.1-201ENST00000411908 397 ntBASIC3.6□□□□□ -1.83
PCDHB2Q9Y5E7 CALM2P2-201ENST00000428512 440 ntBASIC3.6□□□□□ -1.83
PCDHB2Q9Y5E7 NEFMP1-201ENST00000443423 1006 ntBASIC3.6□□□□□ -1.83
PCDHB2Q9Y5E7 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.6□□□□□ -1.83
PCDHB2Q9Y5E7 AP000852.1-201ENST00000472460 573 ntBASIC3.6□□□□□ -1.83
PCDHB2Q9Y5E7 AC091885.1-201ENST00000506658 268 ntBASIC3.6□□□□□ -1.83
PCDHB2Q9Y5E7 RNU4-29P-201ENST00000515943 174 ntBASIC3.6□□□□□ -1.83
PCDHB2Q9Y5E7 RNU6-927P-201ENST00000516199 100 ntBASIC3.6□□□□□ -1.83
PCDHB2Q9Y5E7 SCARNA15.2-201ENST00000516409 127 ntBASIC3.6□□□□□ -1.83
PCDHB2Q9Y5E7 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.6□□□□□ -1.83
PCDHB2Q9Y5E7 HIGD1AP1-201ENST00000550979 275 ntBASIC3.6□□□□□ -1.83
PCDHB2Q9Y5E7 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.6□□□□□ -1.83
PCDHB2Q9Y5E7 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.6□□□□□ -1.83
PCDHB2Q9Y5E7 AC005730.3-201ENST00000583067 366 ntBASIC3.6□□□□□ -1.83
PCDHB2Q9Y5E7 AC010525.2-201ENST00000590920 195 ntBASIC3.6□□□□□ -1.83
PCDHB2Q9Y5E7 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.6□□□□□ -1.83
PCDHB2Q9Y5E7 AC104763.2-201ENST00000604179 382 ntBASIC3.6□□□□□ -1.83
PCDHB2Q9Y5E7 AL357078.3-201ENST00000607528 618 ntBASIC3.6□□□□□ -1.83
PCDHB2Q9Y5E7 AC012409.4-201ENST00000612923 249 ntBASIC3.6□□□□□ -1.83
PCDHB2Q9Y5E7 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.6□□□□□ -1.83
PCDHB2Q9Y5E7 U6.114-201ENST00000636407 96 ntBASIC3.6□□□□□ -1.83
PCDHB2Q9Y5E7 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
PCDHB2Q9Y5E7 ASNSP3-201ENST00000451989 1306 ntBASIC3.6□□□□□ -1.83
PCDHB2Q9Y5E7 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
PCDHB2Q9Y5E7 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.6□□□□□ -1.83
PCDHB2Q9Y5E7 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PCDHB2Q9Y5E7 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.59□□□□□ -1.83
PCDHB2Q9Y5E7 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.59□□□□□ -1.83
PCDHB2Q9Y5E7 RNU1-75P-201ENST00000347264 129 ntBASIC3.59□□□□□ -1.83
PCDHB2Q9Y5E7 Y_RNA.160-201ENST00000363677 92 ntBASIC3.59□□□□□ -1.83
PCDHB2Q9Y5E7 RNU4-20P-201ENST00000365601 151 ntBASIC3.59□□□□□ -1.83
PCDHB2Q9Y5E7 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.59□□□□□ -1.83
PCDHB2Q9Y5E7 RNU4-47P-201ENST00000410876 114 ntBASIC3.59□□□□□ -1.83
PCDHB2Q9Y5E7 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC3.59□□□□□ -1.83
PCDHB2Q9Y5E7 NDUFB4P7-201ENST00000423198 363 ntBASIC3.59□□□□□ -1.83
PCDHB2Q9Y5E7 RPL7P46-201ENST00000425129 740 ntBASIC3.59□□□□□ -1.83
PCDHB2Q9Y5E7 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.59□□□□□ -1.83
PCDHB2Q9Y5E7 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.59□□□□□ -1.83
PCDHB2Q9Y5E7 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.59□□□□□ -1.83
PCDHB2Q9Y5E7 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC3.59□□□□□ -1.83
PCDHB2Q9Y5E7 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.59□□□□□ -1.83
PCDHB2Q9Y5E7 AC006539.3-201ENST00000454258 129 ntBASIC3.59□□□□□ -1.83
PCDHB2Q9Y5E7 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.59□□□□□ -1.83
PCDHB2Q9Y5E7 AC098799.2-201ENST00000509466 868 ntBASIC3.59□□□□□ -1.83
PCDHB2Q9Y5E7 RN7SKP289-201ENST00000517244 295 ntBASIC3.59□□□□□ -1.83
PCDHB2Q9Y5E7 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.59□□□□□ -1.83
PCDHB2Q9Y5E7 TRAV37-201ENST00000553906 342 ntBASIC3.59□□□□□ -1.83
PCDHB2Q9Y5E7 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.59□□□□□ -1.83
PCDHB2Q9Y5E7 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.59□□□□□ -1.83
PCDHB2Q9Y5E7 AC011471.1-201ENST00000585766 187 ntBASIC3.59□□□□□ -1.83
PCDHB2Q9Y5E7 MTND5P42-201ENST00000637720 498 ntBASIC3.59□□□□□ -1.83
PCDHB2Q9Y5E7 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.59□□□□□ -1.83
PCDHB2Q9Y5E7 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
PCDHB2Q9Y5E7 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
PCDHB2Q9Y5E7 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms