Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 ZNF680P1-201ENST00000436625 1469 ntBASIC3.04□□□□□ -1.92
YIPF1Q9Y548 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
YIPF1Q9Y548 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
YIPF1Q9Y548 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.04□□□□□ -1.92
YIPF1Q9Y548 RNA5SP383-201ENST00000362934 120 ntBASIC3.04□□□□□ -1.92
YIPF1Q9Y548 MIR325-201ENST00000385260 98 ntBASIC3.04□□□□□ -1.92
YIPF1Q9Y548 RPS4XP8-201ENST00000402039 771 ntBASIC3.04□□□□□ -1.92
YIPF1Q9Y548 MIR548F1-201ENST00000408667 84 ntBASIC3.04□□□□□ -1.92
YIPF1Q9Y548 FCF1P9-201ENST00000412546 282 ntBASIC3.04□□□□□ -1.92
YIPF1Q9Y548 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
YIPF1Q9Y548 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC3.04□□□□□ -1.92
YIPF1Q9Y548 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
YIPF1Q9Y548 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.04□□□□□ -1.92
YIPF1Q9Y548 AC087499.2-201ENST00000432861 149 ntBASIC3.04□□□□□ -1.92
YIPF1Q9Y548 MTND3P21-201ENST00000433774 331 ntBASIC3.04□□□□□ -1.92
YIPF1Q9Y548 AC092473.1-201ENST00000441098 221 ntBASIC3.04□□□□□ -1.92
YIPF1Q9Y548 AC022364.2-201ENST00000457963 554 ntBASIC3.04□□□□□ -1.92
YIPF1Q9Y548 RNA5SP310-201ENST00000459084 116 ntBASIC3.04□□□□□ -1.92
YIPF1Q9Y548 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.04□□□□□ -1.92
YIPF1Q9Y548 RN7SL442P-201ENST00000473804 320 ntBASIC3.04□□□□□ -1.92
YIPF1Q9Y548 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC3.04□□□□□ -1.92
YIPF1Q9Y548 RN7SL633P-201ENST00000488974 297 ntBASIC3.04□□□□□ -1.92
YIPF1Q9Y548 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.04□□□□□ -1.92
YIPF1Q9Y548 ARL4AP2-201ENST00000507378 601 ntBASIC3.04□□□□□ -1.92
YIPF1Q9Y548 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.04□□□□□ -1.92
YIPF1Q9Y548 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC3.04□□□□□ -1.92
YIPF1Q9Y548 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.04□□□□□ -1.92
YIPF1Q9Y548 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
YIPF1Q9Y548 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.04□□□□□ -1.92
YIPF1Q9Y548 AL359212.1-201ENST00000556608 614 ntBASIC3.04□□□□□ -1.92
YIPF1Q9Y548 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC3.04□□□□□ -1.92
YIPF1Q9Y548 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.04□□□□□ -1.92
YIPF1Q9Y548 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.04□□□□□ -1.92
YIPF1Q9Y548 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.04□□□□□ -1.92
YIPF1Q9Y548 AC008536.2-201ENST00000607284 349 ntBASIC3.04□□□□□ -1.92
YIPF1Q9Y548 AL365204.3-201ENST00000612448 685 ntBASIC3.04□□□□□ -1.92
YIPF1Q9Y548 AC005858.4-201ENST00000623191 700 ntBASIC3.04□□□□□ -1.92
YIPF1Q9Y548 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.04□□□□□ -1.92
YIPF1Q9Y548 SNORA50A-202ENST00000629536 136 ntBASIC3.04□□□□□ -1.92
YIPF1Q9Y548 AL137003.2-201ENST00000606924 2538 ntBASIC3.04□□□□□ -1.92
YIPF1Q9Y548 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.04□□□□□ -1.92
YIPF1Q9Y548 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
YIPF1Q9Y548 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
YIPF1Q9Y548 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.03□□□□□ -1.92
YIPF1Q9Y548 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
YIPF1Q9Y548 OR4G2P-201ENST00000328113 903 ntBASIC3.03□□□□□ -1.92
YIPF1Q9Y548 SNORA62.1-201ENST00000364287 154 ntBASIC3.03□□□□□ -1.92
YIPF1Q9Y548 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC3.03□□□□□ -1.92
YIPF1Q9Y548 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.03□□□□□ -1.92
YIPF1Q9Y548 AC092809.3-201ENST00000415453 231 ntBASIC3.03□□□□□ -1.92
YIPF1Q9Y548 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.03□□□□□ -1.92
YIPF1Q9Y548 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC3.03□□□□□ -1.92
YIPF1Q9Y548 AL590383.1-201ENST00000428602 75 ntBASIC3.03□□□□□ -1.92
YIPF1Q9Y548 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.03□□□□□ -1.92
YIPF1Q9Y548 MTND4P25-201ENST00000441039 533 ntBASIC3.03□□□□□ -1.92
YIPF1Q9Y548 RPL23AP20-201ENST00000447965 421 ntBASIC3.03□□□□□ -1.92
YIPF1Q9Y548 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.03□□□□□ -1.92
YIPF1Q9Y548 FABP5P13-201ENST00000452144 328 ntBASIC3.03□□□□□ -1.92
YIPF1Q9Y548 MRPS17P3-201ENST00000465453 385 ntBASIC3.03□□□□□ -1.92
YIPF1Q9Y548 AC019235.1-201ENST00000503847 207 ntBASIC3.03□□□□□ -1.92
YIPF1Q9Y548 AC108078.2-201ENST00000510750 236 ntBASIC3.03□□□□□ -1.92
YIPF1Q9Y548 SNORD27.1-201ENST00000516319 72 ntBASIC3.03□□□□□ -1.92
YIPF1Q9Y548 Y_RNA.689-201ENST00000516589 107 ntBASIC3.03□□□□□ -1.92
YIPF1Q9Y548 RNA5SP471-201ENST00000516971 106 ntBASIC3.03□□□□□ -1.92
YIPF1Q9Y548 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.03□□□□□ -1.92
YIPF1Q9Y548 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC3.03□□□□□ -1.92
YIPF1Q9Y548 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
YIPF1Q9Y548 OR5AL2P-201ENST00000532185 920 ntBASIC3.03□□□□□ -1.92
YIPF1Q9Y548 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.03□□□□□ -1.92
YIPF1Q9Y548 AC079600.2-201ENST00000550076 130 ntBASIC3.03□□□□□ -1.92
YIPF1Q9Y548 AC138761.3-201ENST00000579993 334 ntBASIC3.03□□□□□ -1.92
YIPF1Q9Y548 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.03□□□□□ -1.92
YIPF1Q9Y548 AC126118.1-201ENST00000607744 628 ntBASIC3.03□□□□□ -1.92
YIPF1Q9Y548 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.03□□□□□ -1.92
YIPF1Q9Y548 AC034102.8-201ENST00000615146 484 ntBASIC3.03□□□□□ -1.92
YIPF1Q9Y548 MTND1P37-201ENST00000636562 264 ntBASIC3.03□□□□□ -1.92
YIPF1Q9Y548 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
YIPF1Q9Y548 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
YIPF1Q9Y548 FAM35BP-202ENST00000497389 3337 ntBASIC3.03□□□□□ -1.92
YIPF1Q9Y548 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.03□□□□□ -1.92
YIPF1Q9Y548 SRP72P2-201ENST00000344851 1979 ntBASIC3.03□□□□□ -1.92
YIPF1Q9Y548 AC090740.1-201ENST00000623193 2262 ntBASIC3.03□□□□□ -1.92
YIPF1Q9Y548 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
YIPF1Q9Y548 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
YIPF1Q9Y548 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
YIPF1Q9Y548 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
YIPF1Q9Y548 AC007785.2-201ENST00000598627 1916 ntBASIC3.02□□□□□ -1.93
YIPF1Q9Y548 UBE2L2-201ENST00000254302 429 ntBASIC3.02□□□□□ -1.93
YIPF1Q9Y548 RNU6-179P-201ENST00000363350 107 ntBASIC3.02□□□□□ -1.93
YIPF1Q9Y548 U3.6-201ENST00000363622 211 ntBASIC3.02□□□□□ -1.93
YIPF1Q9Y548 RNU6-512P-201ENST00000364438 103 ntBASIC3.02□□□□□ -1.93
YIPF1Q9Y548 RNU6-61P-201ENST00000365528 109 ntBASIC3.02□□□□□ -1.93
YIPF1Q9Y548 RNU4-48P-201ENST00000365559 182 ntBASIC3.02□□□□□ -1.93
YIPF1Q9Y548 MIR454-201ENST00000390180 115 ntBASIC3.02□□□□□ -1.93
YIPF1Q9Y548 AL591416.1-201ENST00000404015 867 ntBASIC3.02□□□□□ -1.93
YIPF1Q9Y548 AL590002.1-201ENST00000406554 418 ntBASIC3.02□□□□□ -1.93
YIPF1Q9Y548 RNU6-648P-201ENST00000410190 107 ntBASIC3.02□□□□□ -1.93
YIPF1Q9Y548 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.02□□□□□ -1.93
YIPF1Q9Y548 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
YIPF1Q9Y548 AL592148.1-201ENST00000413568 445 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 129 ms