Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 AC092185.1-201ENST00000491371 97 ntBASIC3.75□□□□□ -1.81
DKK3Q9UBP4 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.75□□□□□ -1.81
DKK3Q9UBP4 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC3.75□□□□□ -1.81
DKK3Q9UBP4 CCDC34P1-201ENST00000507441 517 ntBASIC3.75□□□□□ -1.81
DKK3Q9UBP4 HMGN1P11-201ENST00000508668 303 ntBASIC3.75□□□□□ -1.81
DKK3Q9UBP4 RNU1-61P-201ENST00000516107 151 ntBASIC3.75□□□□□ -1.81
DKK3Q9UBP4 RNA5SP208-201ENST00000516156 78 ntBASIC3.75□□□□□ -1.81
DKK3Q9UBP4 RNU6-864P-201ENST00000516256 108 ntBASIC3.75□□□□□ -1.81
DKK3Q9UBP4 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.75□□□□□ -1.81
DKK3Q9UBP4 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.75□□□□□ -1.81
DKK3Q9UBP4 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC3.75□□□□□ -1.81
DKK3Q9UBP4 MIR5195-201ENST00000583555 115 ntBASIC3.75□□□□□ -1.81
DKK3Q9UBP4 BNIP3P25-201ENST00000596023 559 ntBASIC3.75□□□□□ -1.81
DKK3Q9UBP4 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.75□□□□□ -1.81
DKK3Q9UBP4 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.75□□□□□ -1.81
DKK3Q9UBP4 AC009093.8-201ENST00000641769 292 ntBASIC3.75□□□□□ -1.81
DKK3Q9UBP4 MTND5P1-201ENST00000445440 1375 ntBASIC3.75□□□□□ -1.81
DKK3Q9UBP4 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
DKK3Q9UBP4 AC118273.1-201ENST00000525324 3006 ntBASIC3.74□□□□□ -1.81
DKK3Q9UBP4 ZNF285B-201ENST00000561698 1767 ntBASIC3.74□□□□□ -1.81
DKK3Q9UBP4 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
DKK3Q9UBP4 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
DKK3Q9UBP4 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
DKK3Q9UBP4 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
DKK3Q9UBP4 Y_RNA.378-201ENST00000365652 113 ntBASIC3.74□□□□□ -1.81
DKK3Q9UBP4 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
DKK3Q9UBP4 Y_RNA.384-201ENST00000383909 102 ntBASIC3.74□□□□□ -1.81
DKK3Q9UBP4 Y_RNA.387-201ENST00000383918 102 ntBASIC3.74□□□□□ -1.81
DKK3Q9UBP4 SNORA5A-201ENST00000384111 134 ntBASIC3.74□□□□□ -1.81
DKK3Q9UBP4 RNU6-882P-201ENST00000391025 103 ntBASIC3.74□□□□□ -1.81
DKK3Q9UBP4 RNU1-101P-201ENST00000391171 127 ntBASIC3.74□□□□□ -1.81
DKK3Q9UBP4 AC017079.2-201ENST00000416102 485 ntBASIC3.74□□□□□ -1.81
DKK3Q9UBP4 AL035423.1-201ENST00000420331 213 ntBASIC3.74□□□□□ -1.81
DKK3Q9UBP4 AC093106.2-201ENST00000428212 385 ntBASIC3.74□□□□□ -1.81
DKK3Q9UBP4 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.74□□□□□ -1.81
DKK3Q9UBP4 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.74□□□□□ -1.81
DKK3Q9UBP4 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.74□□□□□ -1.81
DKK3Q9UBP4 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC3.74□□□□□ -1.81
DKK3Q9UBP4 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.74□□□□□ -1.81
DKK3Q9UBP4 RPL21P8-201ENST00000465083 535 ntBASIC3.74□□□□□ -1.81
DKK3Q9UBP4 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
DKK3Q9UBP4 BTF3L4P4-201ENST00000506381 449 ntBASIC3.74□□□□□ -1.81
DKK3Q9UBP4 KLHL2P1-201ENST00000508691 521 ntBASIC3.74□□□□□ -1.81
DKK3Q9UBP4 AC010265.1-201ENST00000513509 211 ntBASIC3.74□□□□□ -1.81
DKK3Q9UBP4 SCARNA15.1-201ENST00000516384 125 ntBASIC3.74□□□□□ -1.81
DKK3Q9UBP4 AC026403.1-201ENST00000518938 295 ntBASIC3.74□□□□□ -1.81
DKK3Q9UBP4 RANP3-201ENST00000530970 276 ntBASIC3.74□□□□□ -1.81
DKK3Q9UBP4 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.74□□□□□ -1.81
DKK3Q9UBP4 AL121603.1-201ENST00000553815 142 ntBASIC3.74□□□□□ -1.81
DKK3Q9UBP4 TRAV37-201ENST00000553906 342 ntBASIC3.74□□□□□ -1.81
DKK3Q9UBP4 OR11H5P-201ENST00000554039 926 ntBASIC3.74□□□□□ -1.81
DKK3Q9UBP4 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.74□□□□□ -1.81
DKK3Q9UBP4 AC078795.3-201ENST00000602913 472 ntBASIC3.74□□□□□ -1.81
DKK3Q9UBP4 AL133255.1-201ENST00000606374 441 ntBASIC3.74□□□□□ -1.81
DKK3Q9UBP4 AL365204.3-201ENST00000612448 685 ntBASIC3.74□□□□□ -1.81
DKK3Q9UBP4 RNVU1-4-201ENST00000612985 164 ntBASIC3.74□□□□□ -1.81
DKK3Q9UBP4 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
DKK3Q9UBP4 AL353748.2-201ENST00000622148 471 ntBASIC3.74□□□□□ -1.81
DKK3Q9UBP4 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
DKK3Q9UBP4 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
DKK3Q9UBP4 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
DKK3Q9UBP4 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.73□□□□□ -1.81
DKK3Q9UBP4 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.73□□□□□ -1.81
DKK3Q9UBP4 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
DKK3Q9UBP4 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
DKK3Q9UBP4 UBE2V1P2-201ENST00000397758 440 ntBASIC3.73□□□□□ -1.81
DKK3Q9UBP4 NDUFS5P1-201ENST00000405668 289 ntBASIC3.73□□□□□ -1.81
DKK3Q9UBP4 ATP5A1P2-201ENST00000412323 255 ntBASIC3.73□□□□□ -1.81
DKK3Q9UBP4 BX323014.1-201ENST00000412876 237 ntBASIC3.73□□□□□ -1.81
DKK3Q9UBP4 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.73□□□□□ -1.81
DKK3Q9UBP4 SSXP9-201ENST00000417503 292 ntBASIC3.73□□□□□ -1.81
DKK3Q9UBP4 AC236972.2-201ENST00000434979 310 ntBASIC3.73□□□□□ -1.81
DKK3Q9UBP4 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC3.73□□□□□ -1.81
DKK3Q9UBP4 PRPS1P1-201ENST00000445305 876 ntBASIC3.73□□□□□ -1.81
DKK3Q9UBP4 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.73□□□□□ -1.81
DKK3Q9UBP4 TRBV12-2-201ENST00000489763 344 ntBASIC3.73□□□□□ -1.81
DKK3Q9UBP4 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.73□□□□□ -1.81
DKK3Q9UBP4 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.73□□□□□ -1.81
DKK3Q9UBP4 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.73□□□□□ -1.81
DKK3Q9UBP4 AP001804.3-201ENST00000525146 880 ntBASIC3.73□□□□□ -1.81
DKK3Q9UBP4 AP006587.4-201ENST00000526053 529 ntBASIC3.73□□□□□ -1.81
DKK3Q9UBP4 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.73□□□□□ -1.81
DKK3Q9UBP4 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.73□□□□□ -1.81
DKK3Q9UBP4 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.73□□□□□ -1.81
DKK3Q9UBP4 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.73□□□□□ -1.81
DKK3Q9UBP4 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.73□□□□□ -1.81
DKK3Q9UBP4 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.73□□□□□ -1.81
DKK3Q9UBP4 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.73□□□□□ -1.81
DKK3Q9UBP4 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
DKK3Q9UBP4 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.73□□□□□ -1.81
DKK3Q9UBP4 AC012409.4-201ENST00000612923 249 ntBASIC3.73□□□□□ -1.81
DKK3Q9UBP4 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC3.73□□□□□ -1.81
DKK3Q9UBP4 AL589994.2-201ENST00000621124 579 ntBASIC3.73□□□□□ -1.81
DKK3Q9UBP4 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.73□□□□□ -1.81
DKK3Q9UBP4 AP000553.6-201ENST00000641242 118 ntBASIC3.73□□□□□ -1.81
DKK3Q9UBP4 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
DKK3Q9UBP4 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.73□□□□□ -1.81
DKK3Q9UBP4 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
DKK3Q9UBP4 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
DKK3Q9UBP4 SRP72P2-201ENST00000344851 1979 ntBASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms