Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 IGBP1P1-201ENST00000554337 1009 ntBASIC4.12□□□□□ -1.75
SSBP4Q9BWG4 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC4.12□□□□□ -1.75
SSBP4Q9BWG4 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.12□□□□□ -1.75
SSBP4Q9BWG4 AL356157.2-201ENST00000605122 111 ntBASIC4.12□□□□□ -1.75
SSBP4Q9BWG4 MIR6809-201ENST00000612189 116 ntBASIC4.12□□□□□ -1.75
SSBP4Q9BWG4 MIR6885-201ENST00000612241 66 ntBASIC4.12□□□□□ -1.75
SSBP4Q9BWG4 AL078604.3-201ENST00000615580 211 ntBASIC4.12□□□□□ -1.75
SSBP4Q9BWG4 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.12□□□□□ -1.75
SSBP4Q9BWG4 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
SSBP4Q9BWG4 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SSBP4Q9BWG4 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SSBP4Q9BWG4 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.12□□□□□ -1.75
SSBP4Q9BWG4 LINC01963-201ENST00000562038 3148 ntBASIC4.12□□□□□ -1.75
SSBP4Q9BWG4 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SSBP4Q9BWG4 AP001273.1-201ENST00000624493 3152 ntBASIC4.12□□□□□ -1.75
SSBP4Q9BWG4 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.12□□□□□ -1.75
SSBP4Q9BWG4 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SSBP4Q9BWG4 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
SSBP4Q9BWG4 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.11□□□□□ -1.75
SSBP4Q9BWG4 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.11□□□□□ -1.75
SSBP4Q9BWG4 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
SSBP4Q9BWG4 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SSBP4Q9BWG4 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SSBP4Q9BWG4 Y_RNA.179-201ENST00000363844 90 ntBASIC4.11□□□□□ -1.75
SSBP4Q9BWG4 Y_RNA.329-201ENST00000365209 107 ntBASIC4.11□□□□□ -1.75
SSBP4Q9BWG4 RNU6-407P-201ENST00000365280 104 ntBASIC4.11□□□□□ -1.75
SSBP4Q9BWG4 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SSBP4Q9BWG4 MIR626-201ENST00000385032 94 ntBASIC4.11□□□□□ -1.75
SSBP4Q9BWG4 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
SSBP4Q9BWG4 U3.37-201ENST00000408528 213 ntBASIC4.11□□□□□ -1.75
SSBP4Q9BWG4 RNU2-68P-201ENST00000410878 191 ntBASIC4.11□□□□□ -1.75
SSBP4Q9BWG4 Z85995.1-201ENST00000415547 335 ntBASIC4.11□□□□□ -1.75
SSBP4Q9BWG4 AL355433.1-201ENST00000422804 300 ntBASIC4.11□□□□□ -1.75
SSBP4Q9BWG4 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC4.11□□□□□ -1.75
SSBP4Q9BWG4 RPL21P66-201ENST00000426566 466 ntBASIC4.11□□□□□ -1.75
SSBP4Q9BWG4 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC4.11□□□□□ -1.75
SSBP4Q9BWG4 CKS1BP5-201ENST00000434172 273 ntBASIC4.11□□□□□ -1.75
SSBP4Q9BWG4 AC112220.1-201ENST00000434628 355 ntBASIC4.11□□□□□ -1.75
SSBP4Q9BWG4 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.11□□□□□ -1.75
SSBP4Q9BWG4 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.11□□□□□ -1.75
SSBP4Q9BWG4 SCARNA15.2-201ENST00000516409 127 ntBASIC4.11□□□□□ -1.75
SSBP4Q9BWG4 AP004607.1-201ENST00000524456 203 ntBASIC4.11□□□□□ -1.75
SSBP4Q9BWG4 AC040958.1-201ENST00000561102 201 ntBASIC4.11□□□□□ -1.75
SSBP4Q9BWG4 ZNF192P1-203ENST00000565888 810 ntBASIC4.11□□□□□ -1.75
SSBP4Q9BWG4 MIR4311-201ENST00000580794 100 ntBASIC4.11□□□□□ -1.75
SSBP4Q9BWG4 FKBP1AP1-201ENST00000594588 318 ntBASIC4.11□□□□□ -1.75
SSBP4Q9BWG4 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC4.11□□□□□ -1.75
SSBP4Q9BWG4 AC006380.1-201ENST00000603598 186 ntBASIC4.11□□□□□ -1.75
SSBP4Q9BWG4 AL589674.2-201ENST00000604304 337 ntBASIC4.11□□□□□ -1.75
SSBP4Q9BWG4 AP002826.1-201ENST00000608835 315 ntBASIC4.11□□□□□ -1.75
SSBP4Q9BWG4 AC090607.5-201ENST00000615692 224 ntBASIC4.11□□□□□ -1.75
SSBP4Q9BWG4 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC4.11□□□□□ -1.75
SSBP4Q9BWG4 AC127024.6-201ENST00000621598 424 ntBASIC4.11□□□□□ -1.75
SSBP4Q9BWG4 U6.95-201ENST00000636931 70 ntBASIC4.11□□□□□ -1.75
SSBP4Q9BWG4 U6.99-201ENST00000637524 83 ntBASIC4.11□□□□□ -1.75
SSBP4Q9BWG4 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.11□□□□□ -1.75
SSBP4Q9BWG4 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.11□□□□□ -1.75
SSBP4Q9BWG4 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SSBP4Q9BWG4 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SSBP4Q9BWG4 AC100757.1-201ENST00000616872 1835 ntBASIC4.11□□□□□ -1.75
SSBP4Q9BWG4 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
SSBP4Q9BWG4 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
SSBP4Q9BWG4 TLK1P1-201ENST00000456760 2440 ntBASIC4.11□□□□□ -1.75
SSBP4Q9BWG4 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
SSBP4Q9BWG4 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SSBP4Q9BWG4 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC4.11□□□□□ -1.75
SSBP4Q9BWG4 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
SSBP4Q9BWG4 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
SSBP4Q9BWG4 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
SSBP4Q9BWG4 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.1□□□□□ -1.75
SSBP4Q9BWG4 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
SSBP4Q9BWG4 AL672167.1-204ENST00000641875 3017 ntBASIC4.1□□□□□ -1.75
SSBP4Q9BWG4 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC4.1□□□□□ -1.75
SSBP4Q9BWG4 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
SSBP4Q9BWG4 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SSBP4Q9BWG4 DEFB108F-201ENST00000344638 222 ntBASIC4.1□□□□□ -1.75
SSBP4Q9BWG4 SNORD32A-201ENST00000364805 84 ntBASIC4.1□□□□□ -1.75
SSBP4Q9BWG4 Y_RNA.369-201ENST00000365568 117 ntBASIC4.1□□□□□ -1.75
SSBP4Q9BWG4 HIST1H3PS1-201ENST00000404612 417 ntBASIC4.1□□□□□ -1.75
SSBP4Q9BWG4 RNA5SP475-201ENST00000410568 110 ntBASIC4.1□□□□□ -1.75
SSBP4Q9BWG4 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.1□□□□□ -1.75
SSBP4Q9BWG4 AC063976.4-201ENST00000421971 163 ntBASIC4.1□□□□□ -1.75
SSBP4Q9BWG4 DDX39BP1-205ENST00000422507 192 ntBASIC4.1□□□□□ -1.75
SSBP4Q9BWG4 AL138785.1-201ENST00000425821 331 ntBASIC4.1□□□□□ -1.75
SSBP4Q9BWG4 RPL12P46-201ENST00000436610 195 ntBASIC4.1□□□□□ -1.75
SSBP4Q9BWG4 GPM6BP3-201ENST00000442797 145 ntBASIC4.1□□□□□ -1.75
SSBP4Q9BWG4 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC4.1□□□□□ -1.75
SSBP4Q9BWG4 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC4.1□□□□□ -1.75
SSBP4Q9BWG4 RPS17P15-201ENST00000475609 349 ntBASIC4.1□□□□□ -1.75
SSBP4Q9BWG4 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.1□□□□□ -1.75
SSBP4Q9BWG4 RNU6-1256P-201ENST00000516539 103 ntBASIC4.1□□□□□ -1.75
SSBP4Q9BWG4 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC4.1□□□□□ -1.75
SSBP4Q9BWG4 AP006245.2-201ENST00000522004 300 ntBASIC4.1□□□□□ -1.75
SSBP4Q9BWG4 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.1□□□□□ -1.75
SSBP4Q9BWG4 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC4.1□□□□□ -1.75
SSBP4Q9BWG4 RN7SL52P-201ENST00000584271 284 ntBASIC4.1□□□□□ -1.75
SSBP4Q9BWG4 RN7SL435P-201ENST00000584418 282 ntBASIC4.1□□□□□ -1.75
SSBP4Q9BWG4 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.1□□□□□ -1.75
SSBP4Q9BWG4 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.1□□□□□ -1.75
SSBP4Q9BWG4 GMFG-212ENST00000602185 423 ntTSL 3 BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms