Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.5□□□□□ -1.53
TRIM47Q96LD4 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TRIM47Q96LD4 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
TRIM47Q96LD4 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
TRIM47Q96LD4 AL590704.1-201ENST00000402856 794 ntBASIC5.49□□□□□ -1.53
TRIM47Q96LD4 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC5.49□□□□□ -1.53
TRIM47Q96LD4 RPL21P90-201ENST00000415692 466 ntBASIC5.49□□□□□ -1.53
TRIM47Q96LD4 FHP1-201ENST00000442741 703 ntBASIC5.49□□□□□ -1.53
TRIM47Q96LD4 RPL23AP24-201ENST00000458203 385 ntBASIC5.49□□□□□ -1.53
TRIM47Q96LD4 RPL37P6-201ENST00000460682 294 ntBASIC5.49□□□□□ -1.53
TRIM47Q96LD4 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TRIM47Q96LD4 AC091167.1-201ENST00000492017 396 ntBASIC5.49□□□□□ -1.53
TRIM47Q96LD4 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.49□□□□□ -1.53
TRIM47Q96LD4 RAC1P5-201ENST00000512182 576 ntBASIC5.49□□□□□ -1.53
TRIM47Q96LD4 AC015795.1-201ENST00000513669 327 ntBASIC5.49□□□□□ -1.53
TRIM47Q96LD4 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC5.49□□□□□ -1.53
TRIM47Q96LD4 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC5.49□□□□□ -1.53
TRIM47Q96LD4 RPL21P9-201ENST00000556149 474 ntBASIC5.49□□□□□ -1.53
TRIM47Q96LD4 AC034105.4-201ENST00000568304 277 ntBASIC5.49□□□□□ -1.53
TRIM47Q96LD4 CYCSP40-201ENST00000575927 294 ntBASIC5.49□□□□□ -1.53
TRIM47Q96LD4 AL133393.1-201ENST00000603277 287 ntBASIC5.49□□□□□ -1.53
TRIM47Q96LD4 ZYXP1-201ENST00000617638 118 ntBASIC5.49□□□□□ -1.53
TRIM47Q96LD4 AC107068.1-201ENST00000563286 4218 ntBASIC5.49□□□□□ -1.53
TRIM47Q96LD4 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
TRIM47Q96LD4 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
TRIM47Q96LD4 ZNF826P-207ENST00000622273 1910 ntBASIC5.48□□□□□ -1.53
TRIM47Q96LD4 STX3-208ENST00000641815 3236 ntBASIC5.48□□□□□ -1.53
TRIM47Q96LD4 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.48□□□□□ -1.53
TRIM47Q96LD4 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
TRIM47Q96LD4 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC5.48□□□□□ -1.53
TRIM47Q96LD4 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
TRIM47Q96LD4 RPL9P7-201ENST00000330965 580 ntBASIC5.48□□□□□ -1.53
TRIM47Q96LD4 RNU4-56P-201ENST00000364700 142 ntBASIC5.48□□□□□ -1.53
TRIM47Q96LD4 RPL23AP26-201ENST00000412728 464 ntBASIC5.48□□□□□ -1.53
TRIM47Q96LD4 AC004938.1-201ENST00000438468 308 ntBASIC5.48□□□□□ -1.53
TRIM47Q96LD4 AL513043.1-201ENST00000439124 535 ntBASIC5.48□□□□□ -1.53
TRIM47Q96LD4 RPS26P56-201ENST00000444468 240 ntBASIC5.48□□□□□ -1.53
TRIM47Q96LD4 TDGF1P1-201ENST00000445734 527 ntBASIC5.48□□□□□ -1.53
TRIM47Q96LD4 GAPDHP27-201ENST00000447427 1020 ntBASIC5.48□□□□□ -1.53
TRIM47Q96LD4 RPL21P41-201ENST00000459863 264 ntBASIC5.48□□□□□ -1.53
TRIM47Q96LD4 AC034236.1-201ENST00000469891 373 ntBASIC5.48□□□□□ -1.53
TRIM47Q96LD4 AC022795.1-201ENST00000473808 480 ntBASIC5.48□□□□□ -1.53
TRIM47Q96LD4 RPS27AP9-201ENST00000477681 438 ntBASIC5.48□□□□□ -1.53
TRIM47Q96LD4 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC5.48□□□□□ -1.53
TRIM47Q96LD4 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC5.48□□□□□ -1.53
TRIM47Q96LD4 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC5.48□□□□□ -1.53
TRIM47Q96LD4 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.48□□□□□ -1.53
TRIM47Q96LD4 MIR5699-201ENST00000578903 90 ntBASIC5.48□□□□□ -1.53
TRIM47Q96LD4 AC110801.1-201ENST00000623590 212 ntBASIC5.48□□□□□ -1.53
TRIM47Q96LD4 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC5.48□□□□□ -1.53
TRIM47Q96LD4 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.48□□□□□ -1.53
TRIM47Q96LD4 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.48□□□□□ -1.53
TRIM47Q96LD4 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.48□□□□□ -1.53
TRIM47Q96LD4 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
TRIM47Q96LD4 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.48□□□□□ -1.53
TRIM47Q96LD4 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
TRIM47Q96LD4 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
TRIM47Q96LD4 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
TRIM47Q96LD4 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
TRIM47Q96LD4 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
TRIM47Q96LD4 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
TRIM47Q96LD4 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC5.47□□□□□ -1.53
TRIM47Q96LD4 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
TRIM47Q96LD4 AC008758.3-201ENST00000507003 1829 ntBASIC5.47□□□□□ -1.53
TRIM47Q96LD4 RNU6-653P-201ENST00000363074 106 ntBASIC5.47□□□□□ -1.53
TRIM47Q96LD4 RNU6-371P-201ENST00000364283 108 ntBASIC5.47□□□□□ -1.53
TRIM47Q96LD4 RNU4-11P-201ENST00000365287 132 ntBASIC5.47□□□□□ -1.53
TRIM47Q96LD4 SNORD82-201ENST00000365530 70 ntBASIC5.47□□□□□ -1.53
TRIM47Q96LD4 Y_RNA.369-201ENST00000365568 117 ntBASIC5.47□□□□□ -1.53
TRIM47Q96LD4 Y_RNA.405-201ENST00000383979 100 ntBASIC5.47□□□□□ -1.53
TRIM47Q96LD4 Y_RNA.451-201ENST00000384200 100 ntBASIC5.47□□□□□ -1.53
TRIM47Q96LD4 RNU6-1144P-201ENST00000384247 104 ntBASIC5.47□□□□□ -1.53
TRIM47Q96LD4 Y_RNA.524-201ENST00000384564 100 ntBASIC5.47□□□□□ -1.53
TRIM47Q96LD4 Y_RNA.542-201ENST00000384641 111 ntBASIC5.47□□□□□ -1.53
TRIM47Q96LD4 Y_RNA.561-201ENST00000384694 100 ntBASIC5.47□□□□□ -1.53
TRIM47Q96LD4 RNU6-21P-201ENST00000384710 107 ntBASIC5.47□□□□□ -1.53
TRIM47Q96LD4 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
TRIM47Q96LD4 SNORA12.2-201ENST00000391040 156 ntBASIC5.47□□□□□ -1.53
TRIM47Q96LD4 MIR513C-201ENST00000401352 84 ntBASIC5.47□□□□□ -1.53
TRIM47Q96LD4 HSPE1P8-201ENST00000406997 288 ntBASIC5.47□□□□□ -1.53
TRIM47Q96LD4 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC5.47□□□□□ -1.53
TRIM47Q96LD4 AL390729.2-201ENST00000416137 156 ntBASIC5.47□□□□□ -1.53
TRIM47Q96LD4 RN7SKP210-201ENST00000459176 261 ntBASIC5.47□□□□□ -1.53
TRIM47Q96LD4 SNORA84-201ENST00000459229 133 ntBASIC5.47□□□□□ -1.53
TRIM47Q96LD4 AC006511.1-201ENST00000470614 315 ntBASIC5.47□□□□□ -1.53
TRIM47Q96LD4 HMGB3P3-201ENST00000510526 400 ntBASIC5.47□□□□□ -1.53
TRIM47Q96LD4 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC5.47□□□□□ -1.53
TRIM47Q96LD4 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.47□□□□□ -1.53
TRIM47Q96LD4 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.47□□□□□ -1.53
TRIM47Q96LD4 RN7SL435P-201ENST00000584418 282 ntBASIC5.47□□□□□ -1.53
TRIM47Q96LD4 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC5.47□□□□□ -1.53
TRIM47Q96LD4 AC009318.2-201ENST00000610917 651 ntBASIC5.47□□□□□ -1.53
TRIM47Q96LD4 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
TRIM47Q96LD4 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
TRIM47Q96LD4 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
TRIM47Q96LD4 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
TRIM47Q96LD4 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
TRIM47Q96LD4 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
TRIM47Q96LD4 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
TRIM47Q96LD4 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.46□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms