Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 AC093023.1-201ENST00000547375 507 ntBASIC5.16□□□□□ -1.58
TRIM50Q86XT4 AL442163.3-201ENST00000554110 156 ntBASIC5.16□□□□□ -1.58
TRIM50Q86XT4 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.16□□□□□ -1.58
TRIM50Q86XT4 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.16□□□□□ -1.58
TRIM50Q86XT4 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC5.16□□□□□ -1.58
TRIM50Q86XT4 B3GNTL1P2-201ENST00000603673 288 ntBASIC5.16□□□□□ -1.58
TRIM50Q86XT4 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
TRIM50Q86XT4 DLEU1_1.1-201ENST00000618107 190 ntBASIC5.16□□□□□ -1.58
TRIM50Q86XT4 U6.92-201ENST00000636464 89 ntBASIC5.16□□□□□ -1.58
TRIM50Q86XT4 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TRIM50Q86XT4 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.16□□□□□ -1.58
TRIM50Q86XT4 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
TRIM50Q86XT4 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
TRIM50Q86XT4 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
TRIM50Q86XT4 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
TRIM50Q86XT4 A2MP1-204ENST00000566278 4130 ntBASIC5.15□□□□□ -1.58
TRIM50Q86XT4 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
TRIM50Q86XT4 ZFRP1-201ENST00000457579 2970 ntBASIC5.15□□□□□ -1.58
TRIM50Q86XT4 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC5.15□□□□□ -1.58
TRIM50Q86XT4 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
TRIM50Q86XT4 AL356489.2-201ENST00000566968 3528 ntBASIC5.15□□□□□ -1.58
TRIM50Q86XT4 AC025031.4-201ENST00000621248 3271 ntBASIC5.15□□□□□ -1.58
TRIM50Q86XT4 Y_RNA.54-201ENST00000362766 105 ntBASIC5.15□□□□□ -1.59
TRIM50Q86XT4 Y_RNA.439-201ENST00000384119 94 ntBASIC5.15□□□□□ -1.59
TRIM50Q86XT4 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC5.15□□□□□ -1.59
TRIM50Q86XT4 snoU13.4-201ENST00000458916 104 ntBASIC5.15□□□□□ -1.59
TRIM50Q86XT4 SCARNA10-201ENST00000459255 330 ntBASIC5.15□□□□□ -1.59
TRIM50Q86XT4 NIP7P2-201ENST00000485801 544 ntBASIC5.15□□□□□ -1.59
TRIM50Q86XT4 RN7SKP122-201ENST00000515923 296 ntBASIC5.15□□□□□ -1.59
TRIM50Q86XT4 Y_RNA.706-201ENST00000516933 99 ntBASIC5.15□□□□□ -1.59
TRIM50Q86XT4 SYF2P1-201ENST00000550658 413 ntBASIC5.15□□□□□ -1.59
TRIM50Q86XT4 AL590392.1-201ENST00000604960 446 ntBASIC5.15□□□□□ -1.59
TRIM50Q86XT4 MIR376A1-201ENST00000616574 68 ntBASIC5.15□□□□□ -1.59
TRIM50Q86XT4 MIR6830-201ENST00000636015 70 ntBASIC5.15□□□□□ -1.59
TRIM50Q86XT4 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC5.15□□□□□ -1.59
TRIM50Q86XT4 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
TRIM50Q86XT4 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
TRIM50Q86XT4 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
TRIM50Q86XT4 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.15□□□□□ -1.59
TRIM50Q86XT4 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.15□□□□□ -1.59
TRIM50Q86XT4 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
TRIM50Q86XT4 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
TRIM50Q86XT4 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
TRIM50Q86XT4 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
TRIM50Q86XT4 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
TRIM50Q86XT4 AL445487.1-201ENST00000415694 1580 ntBASIC5.14□□□□□ -1.59
TRIM50Q86XT4 snoU2_19.2-201ENST00000363024 80 ntBASIC5.14□□□□□ -1.59
TRIM50Q86XT4 RNU6-336P-201ENST00000364891 107 ntBASIC5.14□□□□□ -1.59
TRIM50Q86XT4 RNU6-741P-201ENST00000383889 107 ntBASIC5.14□□□□□ -1.59
TRIM50Q86XT4 RNU6-1181P-201ENST00000384191 106 ntBASIC5.14□□□□□ -1.59
TRIM50Q86XT4 RNU2-68P-201ENST00000410878 191 ntBASIC5.14□□□□□ -1.59
TRIM50Q86XT4 RPL23AP93-201ENST00000440847 484 ntBASIC5.14□□□□□ -1.59
TRIM50Q86XT4 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC5.14□□□□□ -1.59
TRIM50Q86XT4 BTF3P6-201ENST00000448054 499 ntBASIC5.14□□□□□ -1.59
TRIM50Q86XT4 PRELID3BP1-201ENST00000457142 540 ntBASIC5.14□□□□□ -1.59
TRIM50Q86XT4 SNORD108-201ENST00000459332 71 ntBASIC5.14□□□□□ -1.59
TRIM50Q86XT4 RNU7-175P-201ENST00000515915 61 ntBASIC5.14□□□□□ -1.59
TRIM50Q86XT4 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC5.14□□□□□ -1.59
TRIM50Q86XT4 AC104581.2-201ENST00000572227 430 ntBASIC5.14□□□□□ -1.59
TRIM50Q86XT4 AC009779.6-201ENST00000603972 165 ntBASIC5.14□□□□□ -1.59
TRIM50Q86XT4 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC5.14□□□□□ -1.59
TRIM50Q86XT4 AC011944.2-201ENST00000624440 683 ntBASIC5.14□□□□□ -1.59
TRIM50Q86XT4 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC5.14□□□□□ -1.59
TRIM50Q86XT4 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC5.14□□□□□ -1.59
TRIM50Q86XT4 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC5.14□□□□□ -1.59
TRIM50Q86XT4 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
TRIM50Q86XT4 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC5.14□□□□□ -1.59
TRIM50Q86XT4 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5.14□□□□□ -1.59
TRIM50Q86XT4 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
TRIM50Q86XT4 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.13□□□□□ -1.59
TRIM50Q86XT4 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.13□□□□□ -1.59
TRIM50Q86XT4 AC126323.6-202ENST00000568092 3511 ntBASIC5.13□□□□□ -1.59
TRIM50Q86XT4 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
TRIM50Q86XT4 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
TRIM50Q86XT4 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
TRIM50Q86XT4 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.13□□□□□ -1.59
TRIM50Q86XT4 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.13□□□□□ -1.59
TRIM50Q86XT4 Y_RNA.65-201ENST00000362846 100 ntBASIC5.13□□□□□ -1.59
TRIM50Q86XT4 RNA5SP509-201ENST00000364577 119 ntBASIC5.13□□□□□ -1.59
TRIM50Q86XT4 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
TRIM50Q86XT4 Z98745.1-201ENST00000402553 494 ntBASIC5.13□□□□□ -1.59
TRIM50Q86XT4 RPL17P36-201ENST00000420302 549 ntBASIC5.13□□□□□ -1.59
TRIM50Q86XT4 AL591043.1-201ENST00000432461 424 ntBASIC5.13□□□□□ -1.59
TRIM50Q86XT4 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC5.13□□□□□ -1.59
TRIM50Q86XT4 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC5.13□□□□□ -1.59
TRIM50Q86XT4 AC093840.1-201ENST00000511599 336 ntBASIC5.13□□□□□ -1.59
TRIM50Q86XT4 SNORA81.3-201ENST00000517283 198 ntBASIC5.13□□□□□ -1.59
TRIM50Q86XT4 AC022080.3-201ENST00000544433 482 ntBASIC5.13□□□□□ -1.59
TRIM50Q86XT4 PARP1P2-201ENST00000556806 195 ntBASIC5.13□□□□□ -1.59
TRIM50Q86XT4 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC5.13□□□□□ -1.59
TRIM50Q86XT4 AC136932.1-201ENST00000574771 208 ntBASIC5.13□□□□□ -1.59
TRIM50Q86XT4 MIR4300-201ENST00000581016 96 ntBASIC5.13□□□□□ -1.59
TRIM50Q86XT4 AC053481.4-201ENST00000583164 216 ntBASIC5.13□□□□□ -1.59
TRIM50Q86XT4 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC5.13□□□□□ -1.59
TRIM50Q86XT4 RPL23AP78-201ENST00000599928 470 ntBASIC5.13□□□□□ -1.59
TRIM50Q86XT4 AC137590.2-201ENST00000619709 240 ntBASIC5.13□□□□□ -1.59
TRIM50Q86XT4 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
TRIM50Q86XT4 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.13□□□□□ -1.59
TRIM50Q86XT4 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
TRIM50Q86XT4 HSPA8P1-201ENST00000425843 1833 ntBASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms