Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 GPM6BP1-201ENST00000446387 144 ntBASIC2.89□□□□□ -1.95
NUP54Q7Z3B4 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.89□□□□□ -1.95
NUP54Q7Z3B4 C1DP4-201ENST00000455429 424 ntBASIC2.89□□□□□ -1.95
NUP54Q7Z3B4 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.89□□□□□ -1.95
NUP54Q7Z3B4 AC126389.1-201ENST00000477436 290 ntBASIC2.89□□□□□ -1.95
NUP54Q7Z3B4 RN7SL504P-201ENST00000494496 287 ntBASIC2.89□□□□□ -1.95
NUP54Q7Z3B4 AC105252.1-201ENST00000503089 286 ntBASIC2.89□□□□□ -1.95
NUP54Q7Z3B4 AC026427.2-201ENST00000506228 536 ntBASIC2.89□□□□□ -1.95
NUP54Q7Z3B4 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
NUP54Q7Z3B4 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
NUP54Q7Z3B4 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.89□□□□□ -1.95
NUP54Q7Z3B4 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC2.89□□□□□ -1.95
NUP54Q7Z3B4 AC109329.2-201ENST00000519658 482 ntBASIC2.89□□□□□ -1.95
NUP54Q7Z3B4 AC245166.1-201ENST00000521012 253 ntBASIC2.89□□□□□ -1.95
NUP54Q7Z3B4 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC2.89□□□□□ -1.95
NUP54Q7Z3B4 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
NUP54Q7Z3B4 AC135279.1-201ENST00000543493 504 ntBASIC2.89□□□□□ -1.95
NUP54Q7Z3B4 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.89□□□□□ -1.95
NUP54Q7Z3B4 AL359212.1-201ENST00000556608 614 ntBASIC2.89□□□□□ -1.95
NUP54Q7Z3B4 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.89□□□□□ -1.95
NUP54Q7Z3B4 AC098848.2-201ENST00000588023 330 ntBASIC2.89□□□□□ -1.95
NUP54Q7Z3B4 AC104073.3-201ENST00000610942 955 ntBASIC2.89□□□□□ -1.95
NUP54Q7Z3B4 AL449363.1-201ENST00000617815 186 ntBASIC2.89□□□□□ -1.95
NUP54Q7Z3B4 AC136475.10-201ENST00000620253 385 ntBASIC2.89□□□□□ -1.95
NUP54Q7Z3B4 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.89□□□□□ -1.95
NUP54Q7Z3B4 AC138649.3-201ENST00000622154 254 ntBASIC2.89□□□□□ -1.95
NUP54Q7Z3B4 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.89□□□□□ -1.95
NUP54Q7Z3B4 AL161431.1-201ENST00000618966 4205 ntBASIC2.89□□□□□ -1.95
NUP54Q7Z3B4 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
NUP54Q7Z3B4 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC2.88□□□□□ -1.95
NUP54Q7Z3B4 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
NUP54Q7Z3B4 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.88□□□□□ -1.95
NUP54Q7Z3B4 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
NUP54Q7Z3B4 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.88□□□□□ -1.95
NUP54Q7Z3B4 RNU6-181P-201ENST00000363225 107 ntBASIC2.88□□□□□ -1.95
NUP54Q7Z3B4 RNU6-288P-201ENST00000363690 104 ntBASIC2.88□□□□□ -1.95
NUP54Q7Z3B4 RNU6-461P-201ENST00000364195 107 ntBASIC2.88□□□□□ -1.95
NUP54Q7Z3B4 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.88□□□□□ -1.95
NUP54Q7Z3B4 Y_RNA.333-201ENST00000365274 102 ntBASIC2.88□□□□□ -1.95
NUP54Q7Z3B4 RNU6-282P-201ENST00000365357 103 ntBASIC2.88□□□□□ -1.95
NUP54Q7Z3B4 RNU5A-6P-201ENST00000384136 116 ntBASIC2.88□□□□□ -1.95
NUP54Q7Z3B4 RNU6-190P-201ENST00000384154 102 ntBASIC2.88□□□□□ -1.95
NUP54Q7Z3B4 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
NUP54Q7Z3B4 USP9YP14-201ENST00000430663 563 ntBASIC2.88□□□□□ -1.95
NUP54Q7Z3B4 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.88□□□□□ -1.95
NUP54Q7Z3B4 AL358934.1-201ENST00000432346 324 ntBASIC2.88□□□□□ -1.95
NUP54Q7Z3B4 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC2.88□□□□□ -1.95
NUP54Q7Z3B4 RPS3AP12-201ENST00000443616 753 ntBASIC2.88□□□□□ -1.95
NUP54Q7Z3B4 AC132479.1-201ENST00000449160 144 ntBASIC2.88□□□□□ -1.95
NUP54Q7Z3B4 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.88□□□□□ -1.95
NUP54Q7Z3B4 MTCYBP1-201ENST00000454315 1119 ntBASIC2.88□□□□□ -1.95
NUP54Q7Z3B4 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.88□□□□□ -1.95
NUP54Q7Z3B4 RPL12P25-201ENST00000455592 494 ntBASIC2.88□□□□□ -1.95
NUP54Q7Z3B4 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC2.88□□□□□ -1.95
NUP54Q7Z3B4 AC026801.1-201ENST00000497178 464 ntBASIC2.88□□□□□ -1.95
NUP54Q7Z3B4 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC2.88□□□□□ -1.95
NUP54Q7Z3B4 RNU6-445P-201ENST00000516949 107 ntBASIC2.88□□□□□ -1.95
NUP54Q7Z3B4 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC2.88□□□□□ -1.95
NUP54Q7Z3B4 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC2.88□□□□□ -1.95
NUP54Q7Z3B4 OR5B19P-201ENST00000531766 928 ntBASIC2.88□□□□□ -1.95
NUP54Q7Z3B4 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.88□□□□□ -1.95
NUP54Q7Z3B4 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.88□□□□□ -1.95
NUP54Q7Z3B4 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.88□□□□□ -1.95
NUP54Q7Z3B4 MTND1P15-201ENST00000579262 949 ntBASIC2.88□□□□□ -1.95
NUP54Q7Z3B4 AC091805.2-201ENST00000603848 235 ntBASIC2.88□□□□□ -1.95
NUP54Q7Z3B4 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.88□□□□□ -1.95
NUP54Q7Z3B4 AC103591.3-201ENST00000608684 209 ntBASIC2.88□□□□□ -1.95
NUP54Q7Z3B4 AL442067.2-201ENST00000614033 363 ntBASIC2.88□□□□□ -1.95
NUP54Q7Z3B4 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
NUP54Q7Z3B4 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.88□□□□□ -1.95
NUP54Q7Z3B4 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
NUP54Q7Z3B4 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
NUP54Q7Z3B4 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
NUP54Q7Z3B4 RNA5SP387-201ENST00000364226 106 ntBASIC2.87□□□□□ -1.95
NUP54Q7Z3B4 AL356057.2-201ENST00000403318 432 ntBASIC2.87□□□□□ -1.95
NUP54Q7Z3B4 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
NUP54Q7Z3B4 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC2.87□□□□□ -1.95
NUP54Q7Z3B4 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.87□□□□□ -1.95
NUP54Q7Z3B4 SDCBPP3-201ENST00000419629 891 ntBASIC2.87□□□□□ -1.95
NUP54Q7Z3B4 AL109913.1-201ENST00000421173 514 ntBASIC2.87□□□□□ -1.95
NUP54Q7Z3B4 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.87□□□□□ -1.95
NUP54Q7Z3B4 RPL23AP30-201ENST00000432419 501 ntBASIC2.87□□□□□ -1.95
NUP54Q7Z3B4 AL591212.2-201ENST00000433923 257 ntBASIC2.87□□□□□ -1.95
NUP54Q7Z3B4 OSTCP8-201ENST00000445117 448 ntBASIC2.87□□□□□ -1.95
NUP54Q7Z3B4 RPL37P4-201ENST00000448908 268 ntBASIC2.87□□□□□ -1.95
NUP54Q7Z3B4 CECR9-201ENST00000453421 199 ntBASIC2.87□□□□□ -1.95
NUP54Q7Z3B4 AC093899.1-201ENST00000457984 376 ntBASIC2.87□□□□□ -1.95
NUP54Q7Z3B4 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC2.87□□□□□ -1.95
NUP54Q7Z3B4 AC091133.4-201ENST00000511142 308 ntBASIC2.87□□□□□ -1.95
NUP54Q7Z3B4 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC2.87□□□□□ -1.95
NUP54Q7Z3B4 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.87□□□□□ -1.95
NUP54Q7Z3B4 SNORA70.24-201ENST00000517233 118 ntBASIC2.87□□□□□ -1.95
NUP54Q7Z3B4 RN7SKP57-201ENST00000517248 293 ntBASIC2.87□□□□□ -1.95
NUP54Q7Z3B4 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
NUP54Q7Z3B4 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.87□□□□□ -1.95
NUP54Q7Z3B4 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.87□□□□□ -1.95
NUP54Q7Z3B4 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.87□□□□□ -1.95
NUP54Q7Z3B4 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.87□□□□□ -1.95
NUP54Q7Z3B4 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC2.87□□□□□ -1.95
NUP54Q7Z3B4 AC024619.4-201ENST00000580924 316 ntBASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms