Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.36□□□□□ -1.55
CTC1Q2NKJ3 AC107027.2-201ENST00000512197 115 ntBASIC5.36□□□□□ -1.55
CTC1Q2NKJ3 RNU6-537P-201ENST00000517277 103 ntBASIC5.36□□□□□ -1.55
CTC1Q2NKJ3 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.36□□□□□ -1.55
CTC1Q2NKJ3 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.36□□□□□ -1.55
CTC1Q2NKJ3 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CTC1Q2NKJ3 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.36□□□□□ -1.55
CTC1Q2NKJ3 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.36□□□□□ -1.55
CTC1Q2NKJ3 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
CTC1Q2NKJ3 SMG1P6-201ENST00000532337 2930 ntBASIC5.35□□□□□ -1.55
CTC1Q2NKJ3 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CTC1Q2NKJ3 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC5.35□□□□□ -1.55
CTC1Q2NKJ3 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CTC1Q2NKJ3 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
CTC1Q2NKJ3 FTLP6-201ENST00000355274 422 ntBASIC5.35□□□□□ -1.55
CTC1Q2NKJ3 RNU6-512P-201ENST00000364438 103 ntBASIC5.35□□□□□ -1.55
CTC1Q2NKJ3 RN7SKP16-201ENST00000410180 299 ntBASIC5.35□□□□□ -1.55
CTC1Q2NKJ3 RNA5SP296-201ENST00000410523 111 ntBASIC5.35□□□□□ -1.55
CTC1Q2NKJ3 SNORD56-201ENST00000413522 71 ntBASIC5.35□□□□□ -1.55
CTC1Q2NKJ3 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC5.35□□□□□ -1.55
CTC1Q2NKJ3 BTF3P11-201ENST00000426582 477 ntBASIC5.35□□□□□ -1.55
CTC1Q2NKJ3 RNU7-197P-201ENST00000458836 62 ntBASIC5.35□□□□□ -1.55
CTC1Q2NKJ3 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC5.35□□□□□ -1.55
CTC1Q2NKJ3 RPS29P27-201ENST00000463711 170 ntBASIC5.35□□□□□ -1.55
CTC1Q2NKJ3 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC5.35□□□□□ -1.55
CTC1Q2NKJ3 SNORA40.9-201ENST00000515895 93 ntBASIC5.35□□□□□ -1.55
CTC1Q2NKJ3 MIR892C-201ENST00000516410 77 ntBASIC5.35□□□□□ -1.55
CTC1Q2NKJ3 RNU6-567P-201ENST00000516746 107 ntBASIC5.35□□□□□ -1.55
CTC1Q2NKJ3 IGKV2D-36-201ENST00000518643 226 ntBASIC5.35□□□□□ -1.55
CTC1Q2NKJ3 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC5.35□□□□□ -1.55
CTC1Q2NKJ3 AC090049.2-201ENST00000550377 109 ntBASIC5.35□□□□□ -1.55
CTC1Q2NKJ3 AC090877.1-201ENST00000561418 344 ntBASIC5.35□□□□□ -1.55
CTC1Q2NKJ3 MIR4472-2-201ENST00000582069 67 ntBASIC5.35□□□□□ -1.55
CTC1Q2NKJ3 AL020997.2-201ENST00000602607 184 ntBASIC5.35□□□□□ -1.55
CTC1Q2NKJ3 AP005432.2-201ENST00000608162 586 ntBASIC5.35□□□□□ -1.55
CTC1Q2NKJ3 AC068831.7-201ENST00000616954 363 ntBASIC5.35□□□□□ -1.55
CTC1Q2NKJ3 FTO-223ENST00000640179 210 ntTSL 5 BASIC5.35□□□□□ -1.55
CTC1Q2NKJ3 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
CTC1Q2NKJ3 STK31-205ENST00000433467 3085 ntTSL 2 BASIC5.35□□□□□ -1.55
CTC1Q2NKJ3 AL672167.1-204ENST00000641875 3017 ntBASIC5.35□□□□□ -1.55
CTC1Q2NKJ3 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.35□□□□□ -1.55
CTC1Q2NKJ3 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.35□□□□□ -1.55
CTC1Q2NKJ3 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
CTC1Q2NKJ3 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.35□□□□□ -1.55
CTC1Q2NKJ3 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CTC1Q2NKJ3 ZNF204P-201ENST00000416749 2397 ntBASIC5.35□□□□□ -1.55
CTC1Q2NKJ3 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC5.35□□□□□ -1.55
CTC1Q2NKJ3 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CTC1Q2NKJ3 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC5.34□□□□□ -1.55
CTC1Q2NKJ3 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CTC1Q2NKJ3 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CTC1Q2NKJ3 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CTC1Q2NKJ3 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.34□□□□□ -1.55
CTC1Q2NKJ3 RPS15AP5-201ENST00000436276 388 ntBASIC5.34□□□□□ -1.55
CTC1Q2NKJ3 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC5.34□□□□□ -1.55
CTC1Q2NKJ3 AL354714.3-201ENST00000447284 493 ntBASIC5.34□□□□□ -1.55
CTC1Q2NKJ3 RPS20P10-201ENST00000451209 253 ntBASIC5.34□□□□□ -1.55
CTC1Q2NKJ3 snoU13.30-201ENST00000458951 104 ntBASIC5.34□□□□□ -1.55
CTC1Q2NKJ3 RNU2-56P-201ENST00000516826 190 ntBASIC5.34□□□□□ -1.55
CTC1Q2NKJ3 AP003327.1-201ENST00000529684 127 ntBASIC5.34□□□□□ -1.55
CTC1Q2NKJ3 MIR1254-2-201ENST00000579553 63 ntBASIC5.34□□□□□ -1.55
CTC1Q2NKJ3 MIR4715-201ENST00000584117 79 ntBASIC5.34□□□□□ -1.55
CTC1Q2NKJ3 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CTC1Q2NKJ3 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CTC1Q2NKJ3 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.34□□□□□ -1.55
CTC1Q2NKJ3 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC5.34□□□□□ -1.55
CTC1Q2NKJ3 AC092593.1-201ENST00000515413 1815 ntBASIC5.34□□□□□ -1.55
CTC1Q2NKJ3 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
CTC1Q2NKJ3 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
CTC1Q2NKJ3 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
CTC1Q2NKJ3 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CTC1Q2NKJ3 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CTC1Q2NKJ3 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.33□□□□□ -1.56
CTC1Q2NKJ3 UBBP2-201ENST00000376781 231 ntBASIC5.33□□□□□ -1.56
CTC1Q2NKJ3 SNORD37.2-201ENST00000391075 66 ntBASIC5.33□□□□□ -1.56
CTC1Q2NKJ3 LAP3P1-201ENST00000403648 294 ntBASIC5.33□□□□□ -1.56
CTC1Q2NKJ3 CYCSP10-201ENST00000417973 294 ntBASIC5.33□□□□□ -1.56
CTC1Q2NKJ3 RPL17P36-201ENST00000420302 549 ntBASIC5.33□□□□□ -1.56
CTC1Q2NKJ3 AC004975.1-201ENST00000428733 208 ntBASIC5.33□□□□□ -1.56
CTC1Q2NKJ3 IGHV5-78-201ENST00000450948 295 ntBASIC5.33□□□□□ -1.56
CTC1Q2NKJ3 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC5.33□□□□□ -1.56
CTC1Q2NKJ3 RPS5P7-201ENST00000456664 608 ntBASIC5.33□□□□□ -1.56
CTC1Q2NKJ3 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.33□□□□□ -1.56
CTC1Q2NKJ3 AK3P2-201ENST00000507976 429 ntBASIC5.33□□□□□ -1.56
CTC1Q2NKJ3 Y_RNA.712-201ENST00000517011 92 ntBASIC5.33□□□□□ -1.56
CTC1Q2NKJ3 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.33□□□□□ -1.56
CTC1Q2NKJ3 NACAP3-201ENST00000552100 481 ntBASIC5.33□□□□□ -1.56
CTC1Q2NKJ3 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC5.33□□□□□ -1.56
CTC1Q2NKJ3 HMGB1P14-201ENST00000557424 591 ntBASIC5.33□□□□□ -1.56
CTC1Q2NKJ3 MIR4277-201ENST00000578298 84 ntBASIC5.33□□□□□ -1.56
CTC1Q2NKJ3 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC5.33□□□□□ -1.56
CTC1Q2NKJ3 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.33□□□□□ -1.56
CTC1Q2NKJ3 AC108081.1-201ENST00000604358 221 ntBASIC5.33□□□□□ -1.56
CTC1Q2NKJ3 RMST_4.1-201ENST00000616886 107 ntBASIC5.33□□□□□ -1.56
CTC1Q2NKJ3 MIR6830-201ENST00000636015 70 ntBASIC5.33□□□□□ -1.56
CTC1Q2NKJ3 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CTC1Q2NKJ3 AC104623.2-202ENST00000623477 4002 ntBASIC5.33□□□□□ -1.56
CTC1Q2NKJ3 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CTC1Q2NKJ3 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
CTC1Q2NKJ3 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms