Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4□□□□□ -1.77
GFRA1P56159 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC4□□□□□ -1.77
GFRA1P56159 AL161670.1-201ENST00000554348 137 ntBASIC4□□□□□ -1.77
GFRA1P56159 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4□□□□□ -1.77
GFRA1P56159 AC079587.1-201ENST00000603846 277 ntBASIC4□□□□□ -1.77
GFRA1P56159 AC005046.1-201ENST00000608515 625 ntBASIC4□□□□□ -1.77
GFRA1P56159 AC083809.1-201ENST00000615051 472 ntBASIC4□□□□□ -1.77
GFRA1P56159 U4.1-201ENST00000620349 87 ntBASIC4□□□□□ -1.77
GFRA1P56159 MIR6758-201ENST00000620653 63 ntBASIC4□□□□□ -1.77
GFRA1P56159 AC007792.1-201ENST00000623023 402 ntBASIC4□□□□□ -1.77
GFRA1P56159 AC091905.2-201ENST00000623143 306 ntBASIC4□□□□□ -1.77
GFRA1P56159 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
GFRA1P56159 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4□□□□□ -1.77
GFRA1P56159 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4□□□□□ -1.77
GFRA1P56159 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4□□□□□ -1.77
GFRA1P56159 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
GFRA1P56159 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4□□□□□ -1.77
GFRA1P56159 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
GFRA1P56159 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.99□□□□□ -1.77
GFRA1P56159 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
GFRA1P56159 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
GFRA1P56159 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC3.99□□□□□ -1.77
GFRA1P56159 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
GFRA1P56159 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
GFRA1P56159 AC087190.4-201ENST00000574616 8334 ntBASIC3.99□□□□□ -1.77
GFRA1P56159 RNU4-42P-201ENST00000364738 142 ntBASIC3.99□□□□□ -1.77
GFRA1P56159 Y_RNA.380-201ENST00000365663 111 ntBASIC3.99□□□□□ -1.77
GFRA1P56159 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
GFRA1P56159 YPEL5P1-201ENST00000419731 367 ntBASIC3.99□□□□□ -1.77
GFRA1P56159 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.99□□□□□ -1.77
GFRA1P56159 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.99□□□□□ -1.77
GFRA1P56159 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC3.99□□□□□ -1.77
GFRA1P56159 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC3.99□□□□□ -1.77
GFRA1P56159 PHBP16-201ENST00000446318 950 ntBASIC3.99□□□□□ -1.77
GFRA1P56159 AL451050.1-201ENST00000450126 415 ntBASIC3.99□□□□□ -1.77
GFRA1P56159 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.99□□□□□ -1.77
GFRA1P56159 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
GFRA1P56159 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
GFRA1P56159 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC3.99□□□□□ -1.77
GFRA1P56159 SNORA40.14-201ENST00000516543 86 ntBASIC3.99□□□□□ -1.77
GFRA1P56159 AP004607.1-201ENST00000524456 203 ntBASIC3.99□□□□□ -1.77
GFRA1P56159 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.99□□□□□ -1.77
GFRA1P56159 LINC00933-203ENST00000559812 219 ntBASIC3.99□□□□□ -1.77
GFRA1P56159 H3F3AP1-201ENST00000559984 334 ntBASIC3.99□□□□□ -1.77
GFRA1P56159 CYCSP39-201ENST00000565821 309 ntBASIC3.99□□□□□ -1.77
GFRA1P56159 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC3.99□□□□□ -1.77
GFRA1P56159 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.99□□□□□ -1.77
GFRA1P56159 RPL7P50-201ENST00000600588 727 ntBASIC3.99□□□□□ -1.77
GFRA1P56159 Z98751.3-201ENST00000604447 521 ntBASIC3.99□□□□□ -1.77
GFRA1P56159 AC124312.5-201ENST00000604451 268 ntBASIC3.99□□□□□ -1.77
GFRA1P56159 MIR6798-201ENST00000612887 67 ntBASIC3.99□□□□□ -1.77
GFRA1P56159 uc_338.13-201ENST00000618243 179 ntBASIC3.99□□□□□ -1.77
GFRA1P56159 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.99□□□□□ -1.77
GFRA1P56159 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.99□□□□□ -1.77
GFRA1P56159 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
GFRA1P56159 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
GFRA1P56159 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.99□□□□□ -1.77
GFRA1P56159 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.99□□□□□ -1.77
GFRA1P56159 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC3.99□□□□□ -1.77
GFRA1P56159 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
GFRA1P56159 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
GFRA1P56159 MTND5P27-201ENST00000428871 1720 ntBASIC3.98□□□□□ -1.77
GFRA1P56159 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC3.98□□□□□ -1.77
GFRA1P56159 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
GFRA1P56159 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
GFRA1P56159 RNU6-227P-201ENST00000362865 103 ntBASIC3.98□□□□□ -1.77
GFRA1P56159 SNORD14.1-201ENST00000365609 90 ntBASIC3.98□□□□□ -1.77
GFRA1P56159 AC068538.1-201ENST00000376856 336 ntBASIC3.98□□□□□ -1.77
GFRA1P56159 Y_RNA.574-201ENST00000384766 95 ntBASIC3.98□□□□□ -1.77
GFRA1P56159 RNA5SP31-201ENST00000411144 127 ntBASIC3.98□□□□□ -1.77
GFRA1P56159 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.98□□□□□ -1.77
GFRA1P56159 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.98□□□□□ -1.77
GFRA1P56159 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.98□□□□□ -1.77
GFRA1P56159 RPL23AP25-201ENST00000430973 463 ntBASIC3.98□□□□□ -1.77
GFRA1P56159 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.98□□□□□ -1.77
GFRA1P56159 TPT1P12-201ENST00000448968 492 ntBASIC3.98□□□□□ -1.77
GFRA1P56159 HMGB3P8-201ENST00000449709 577 ntBASIC3.98□□□□□ -1.77
GFRA1P56159 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.98□□□□□ -1.77
GFRA1P56159 U8.20-201ENST00000459445 131 ntBASIC3.98□□□□□ -1.77
GFRA1P56159 RN7SL303P-201ENST00000469773 251 ntBASIC3.98□□□□□ -1.77
GFRA1P56159 AC084357.1-201ENST00000473404 255 ntBASIC3.98□□□□□ -1.77
GFRA1P56159 RPS4XP13-201ENST00000483219 789 ntBASIC3.98□□□□□ -1.77
GFRA1P56159 UBE2CP3-201ENST00000502715 450 ntBASIC3.98□□□□□ -1.77
GFRA1P56159 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC3.98□□□□□ -1.77
GFRA1P56159 AC022882.1-201ENST00000532142 501 ntBASIC3.98□□□□□ -1.77
GFRA1P56159 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.98□□□□□ -1.77
GFRA1P56159 MIR5696-201ENST00000578474 85 ntBASIC3.98□□□□□ -1.77
GFRA1P56159 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.98□□□□□ -1.77
GFRA1P56159 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.98□□□□□ -1.77
GFRA1P56159 AL355297.3-201ENST00000604082 446 ntBASIC3.98□□□□□ -1.77
GFRA1P56159 AC113403.1-201ENST00000604910 193 ntBASIC3.98□□□□□ -1.77
GFRA1P56159 AC008962.1-201ENST00000605729 304 ntBASIC3.98□□□□□ -1.77
GFRA1P56159 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC3.98□□□□□ -1.77
GFRA1P56159 AC011944.2-201ENST00000624440 683 ntBASIC3.98□□□□□ -1.77
GFRA1P56159 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC3.98□□□□□ -1.77
GFRA1P56159 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
GFRA1P56159 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
GFRA1P56159 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
GFRA1P56159 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.98□□□□□ -1.77
GFRA1P56159 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms