Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 RNU6-1025P-201ENST00000410629 104 ntBASIC3.24□□□□□ -1.89
SOX2P48431 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.24□□□□□ -1.89
SOX2P48431 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC3.24□□□□□ -1.89
SOX2P48431 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC3.24□□□□□ -1.89
SOX2P48431 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.24□□□□□ -1.89
SOX2P48431 Z82210.1-201ENST00000440037 231 ntBASIC3.24□□□□□ -1.89
SOX2P48431 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC3.24□□□□□ -1.89
SOX2P48431 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC3.24□□□□□ -1.89
SOX2P48431 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.24□□□□□ -1.89
SOX2P48431 Y_RNA.635-201ENST00000459041 101 ntBASIC3.24□□□□□ -1.89
SOX2P48431 Y_RNA.632-201ENST00000459189 102 ntBASIC3.24□□□□□ -1.89
SOX2P48431 AC087884.1-201ENST00000469738 328 ntBASIC3.24□□□□□ -1.89
SOX2P48431 AC117503.1-201ENST00000472241 394 ntBASIC3.24□□□□□ -1.89
SOX2P48431 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.24□□□□□ -1.89
SOX2P48431 RNA5SP454-201ENST00000517231 127 ntBASIC3.24□□□□□ -1.89
SOX2P48431 AC069113.1-201ENST00000517763 267 ntBASIC3.24□□□□□ -1.89
SOX2P48431 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.24□□□□□ -1.89
SOX2P48431 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.24□□□□□ -1.89
SOX2P48431 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.24□□□□□ -1.89
SOX2P48431 AC138761.3-201ENST00000579993 334 ntBASIC3.24□□□□□ -1.89
SOX2P48431 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.24□□□□□ -1.89
SOX2P48431 MIR3939-201ENST00000582614 106 ntBASIC3.24□□□□□ -1.89
SOX2P48431 AC002044.1-201ENST00000606707 158 ntBASIC3.24□□□□□ -1.89
SOX2P48431 MIR6867-201ENST00000610636 67 ntBASIC3.24□□□□□ -1.89
SOX2P48431 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.24□□□□□ -1.89
SOX2P48431 FAM157A-202ENST00000615155 405 ntBASIC3.24□□□□□ -1.89
SOX2P48431 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.24□□□□□ -1.89
SOX2P48431 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SOX2P48431 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SOX2P48431 PWAR6-201ENST00000552334 4618 ntBASIC3.24□□□□□ -1.89
SOX2P48431 AL672296.1-201ENST00000427780 2158 ntBASIC3.24□□□□□ -1.89
SOX2P48431 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
SOX2P48431 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SOX2P48431 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.23□□□□□ -1.89
SOX2P48431 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.23□□□□□ -1.89
SOX2P48431 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.23□□□□□ -1.89
SOX2P48431 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SOX2P48431 RNU1-32P-201ENST00000363937 159 ntBASIC3.23□□□□□ -1.89
SOX2P48431 Y_RNA.339-201ENST00000365325 102 ntBASIC3.23□□□□□ -1.89
SOX2P48431 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SOX2P48431 SNORD116-11-201ENST00000383882 92 ntBASIC3.23□□□□□ -1.89
SOX2P48431 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SOX2P48431 AC007256.1-201ENST00000392253 2765 ntBASIC3.23□□□□□ -1.89
SOX2P48431 AP000567.1-201ENST00000406413 156 ntBASIC3.23□□□□□ -1.89
SOX2P48431 AL353621.1-201ENST00000418219 243 ntBASIC3.23□□□□□ -1.89
SOX2P48431 NDUFB4P6-201ENST00000436819 366 ntBASIC3.23□□□□□ -1.89
SOX2P48431 HMGB1P12-201ENST00000438594 598 ntBASIC3.23□□□□□ -1.89
SOX2P48431 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3.23□□□□□ -1.89
SOX2P48431 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.23□□□□□ -1.89
SOX2P48431 CECR9-201ENST00000453421 199 ntBASIC3.23□□□□□ -1.89
SOX2P48431 RPS4XP13-201ENST00000483219 789 ntBASIC3.23□□□□□ -1.89
SOX2P48431 AC068587.1-201ENST00000483613 781 ntBASIC3.23□□□□□ -1.89
SOX2P48431 AC022493.1-201ENST00000492984 337 ntBASIC3.23□□□□□ -1.89
SOX2P48431 RPL30P5-201ENST00000494923 336 ntBASIC3.23□□□□□ -1.89
SOX2P48431 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.23□□□□□ -1.89
SOX2P48431 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.23□□□□□ -1.89
SOX2P48431 SNORA25.17-201ENST00000517184 124 ntBASIC3.23□□□□□ -1.89
SOX2P48431 AC087854.1-201ENST00000519706 414 ntBASIC3.23□□□□□ -1.89
SOX2P48431 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.23□□□□□ -1.89
SOX2P48431 COPS8P3-201ENST00000526024 482 ntBASIC3.23□□□□□ -1.89
SOX2P48431 HPRT1P3-201ENST00000539521 576 ntBASIC3.23□□□□□ -1.89
SOX2P48431 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.23□□□□□ -1.89
SOX2P48431 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.23□□□□□ -1.89
SOX2P48431 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.23□□□□□ -1.89
SOX2P48431 AC007151.1-201ENST00000572774 483 ntBASIC3.23□□□□□ -1.89
SOX2P48431 LRRC37A5P-203ENST00000580181 585 ntBASIC3.23□□□□□ -1.89
SOX2P48431 POLR3GP2-201ENST00000588366 668 ntBASIC3.23□□□□□ -1.89
SOX2P48431 APOOP1-201ENST00000604695 592 ntBASIC3.23□□□□□ -1.89
SOX2P48431 AC245389.1-201ENST00000605141 529 ntBASIC3.23□□□□□ -1.89
SOX2P48431 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.23□□□□□ -1.89
SOX2P48431 AL138726.1-201ENST00000614873 333 ntBASIC3.23□□□□□ -1.89
SOX2P48431 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC3.23□□□□□ -1.89
SOX2P48431 AL160413.1-201ENST00000622780 310 ntBASIC3.23□□□□□ -1.89
SOX2P48431 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.23□□□□□ -1.89
SOX2P48431 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SOX2P48431 AL359693.1-201ENST00000614959 2407 ntBASIC3.23□□□□□ -1.89
SOX2P48431 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.23□□□□□ -1.89
SOX2P48431 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
SOX2P48431 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.22□□□□□ -1.89
SOX2P48431 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.22□□□□□ -1.89
SOX2P48431 AC091152.2-201ENST00000591628 2569 ntBASIC3.22□□□□□ -1.89
SOX2P48431 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SOX2P48431 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.22□□□□□ -1.89
SOX2P48431 TNPO1P3-201ENST00000436471 2662 ntBASIC3.22□□□□□ -1.89
SOX2P48431 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
SOX2P48431 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SOX2P48431 Y_RNA.135-201ENST00000363439 95 ntBASIC3.22□□□□□ -1.89
SOX2P48431 MIR184-201ENST00000384962 84 ntBASIC3.22□□□□□ -1.89
SOX2P48431 U3.42-201ENST00000408746 214 ntBASIC3.22□□□□□ -1.89
SOX2P48431 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SOX2P48431 RNU6-607P-201ENST00000411283 108 ntBASIC3.22□□□□□ -1.89
SOX2P48431 RPL37P10-201ENST00000412884 288 ntBASIC3.22□□□□□ -1.89
SOX2P48431 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.22□□□□□ -1.89
SOX2P48431 AL356095.1-201ENST00000417217 199 ntBASIC3.22□□□□□ -1.89
SOX2P48431 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.22□□□□□ -1.89
SOX2P48431 RPL18P10-201ENST00000425606 538 ntBASIC3.22□□□□□ -1.89
SOX2P48431 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.22□□□□□ -1.89
SOX2P48431 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC3.22□□□□□ -1.89
SOX2P48431 SNAP23P1-201ENST00000433229 246 ntBASIC3.22□□□□□ -1.89
SOX2P48431 RPL32P28-201ENST00000443577 397 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms