Protein–RNA interactions for Protein: P14651

HOXB3, Homeobox protein Hox-B3, humanhuman

Predicted RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3P14651 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.64□□□□□ -1.51
HOXB3P14651 SNORD84-203ENST00000584275 78 ntBASIC5.64□□□□□ -1.51
HOXB3P14651 SNRPGP20-201ENST00000604477 205 ntBASIC5.64□□□□□ -1.51
HOXB3P14651 RNA5SP439-201ENST00000617595 124 ntBASIC5.64□□□□□ -1.51
HOXB3P14651 MIR548AY-201ENST00000617669 107 ntBASIC5.64□□□□□ -1.51
HOXB3P14651 CU639417.4-201ENST00000623928 207 ntBASIC5.64□□□□□ -1.51
HOXB3P14651 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC5.64□□□□□ -1.51
HOXB3P14651 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HOXB3P14651 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HOXB3P14651 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HOXB3P14651 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HOXB3P14651 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HOXB3P14651 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.64□□□□□ -1.51
HOXB3P14651 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
HOXB3P14651 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HOXB3P14651 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
HOXB3P14651 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
HOXB3P14651 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
HOXB3P14651 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HOXB3P14651 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.64□□□□□ -1.51
HOXB3P14651 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
HOXB3P14651 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
HOXB3P14651 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.63□□□□□ -1.51
HOXB3P14651 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HOXB3P14651 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.63□□□□□ -1.51
HOXB3P14651 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HOXB3P14651 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
HOXB3P14651 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
HOXB3P14651 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HOXB3P14651 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.63□□□□□ -1.51
HOXB3P14651 Y_RNA.342-201ENST00000365352 113 ntBASIC5.63□□□□□ -1.51
HOXB3P14651 RNU6-1276P-201ENST00000365372 104 ntBASIC5.63□□□□□ -1.51
HOXB3P14651 MIR544A-201ENST00000384855 91 ntBASIC5.63□□□□□ -1.51
HOXB3P14651 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
HOXB3P14651 RNA5SP496-201ENST00000391240 109 ntBASIC5.63□□□□□ -1.51
HOXB3P14651 AL078599.1-201ENST00000402075 293 ntBASIC5.63□□□□□ -1.51
HOXB3P14651 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC5.63□□□□□ -1.51
HOXB3P14651 snoU13.3-201ENST00000459441 104 ntBASIC5.63□□□□□ -1.51
HOXB3P14651 COX6CP6-201ENST00000490840 228 ntBASIC5.63□□□□□ -1.51
HOXB3P14651 RNA5SP154-201ENST00000516193 111 ntBASIC5.63□□□□□ -1.51
HOXB3P14651 SCARNA15.2-201ENST00000516409 127 ntBASIC5.63□□□□□ -1.51
HOXB3P14651 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.63□□□□□ -1.51
HOXB3P14651 U73479.1-201ENST00000618062 168 ntBASIC5.63□□□□□ -1.51
HOXB3P14651 AL035470.1-201ENST00000622571 220 ntBASIC5.63□□□□□ -1.51
HOXB3P14651 MIR4662A-201ENST00000637499 67 ntBASIC5.63□□□□□ -1.51
HOXB3P14651 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HOXB3P14651 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HOXB3P14651 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
HOXB3P14651 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
HOXB3P14651 DMD-228ENST00000541735 7080 ntTSL 5 BASIC5.63□□□□□ -1.51
HOXB3P14651 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HOXB3P14651 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HOXB3P14651 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HOXB3P14651 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
HOXB3P14651 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
HOXB3P14651 AL022323.4-201ENST00000623980 13120 ntBASIC5.62□□□□□ -1.51
HOXB3P14651 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
HOXB3P14651 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.62□□□□□ -1.51
HOXB3P14651 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HOXB3P14651 AC009962.1-201ENST00000567327 3813 ntBASIC5.62□□□□□ -1.51
HOXB3P14651 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HOXB3P14651 AC007842.1-201ENST00000597336 2039 ntBASIC5.62□□□□□ -1.51
HOXB3P14651 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HOXB3P14651 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HOXB3P14651 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HOXB3P14651 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.62□□□□□ -1.51
HOXB3P14651 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
HOXB3P14651 Y_RNA.93-201ENST00000363066 109 ntBASIC5.62□□□□□ -1.51
HOXB3P14651 RNY1P1-201ENST00000364372 112 ntBASIC5.62□□□□□ -1.51
HOXB3P14651 Y_RNA.415-201ENST00000384012 112 ntBASIC5.62□□□□□ -1.51
HOXB3P14651 RNU6-837P-201ENST00000391056 108 ntBASIC5.62□□□□□ -1.51
HOXB3P14651 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC5.62□□□□□ -1.51
HOXB3P14651 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.62□□□□□ -1.51
HOXB3P14651 AC008134.1-201ENST00000420943 193 ntBASIC5.62□□□□□ -1.51
HOXB3P14651 AC099670.2-201ENST00000435130 321 ntBASIC5.62□□□□□ -1.51
HOXB3P14651 AC007969.2-201ENST00000441891 191 ntBASIC5.62□□□□□ -1.51
HOXB3P14651 IGLV2-34-201ENST00000490007 283 ntBASIC5.62□□□□□ -1.51
HOXB3P14651 AC008897.1-201ENST00000494006 347 ntBASIC5.62□□□□□ -1.51
HOXB3P14651 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC5.62□□□□□ -1.51
HOXB3P14651 RNU6-1299P-201ENST00000516316 100 ntBASIC5.62□□□□□ -1.51
HOXB3P14651 MIR2117-201ENST00000516780 80 ntBASIC5.62□□□□□ -1.51
HOXB3P14651 AC099778.2-201ENST00000610904 211 ntBASIC5.62□□□□□ -1.51
HOXB3P14651 AC116447.1-201ENST00000613153 453 ntBASIC5.62□□□□□ -1.51
HOXB3P14651 IGLL4P-201ENST00000614590 133 ntBASIC5.62□□□□□ -1.51
HOXB3P14651 MIR6837-201ENST00000620884 64 ntBASIC5.62□□□□□ -1.51
HOXB3P14651 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.62□□□□□ -1.51
HOXB3P14651 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC5.62□□□□□ -1.51
HOXB3P14651 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC5.62□□□□□ -1.51
HOXB3P14651 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
HOXB3P14651 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HOXB3P14651 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.62□□□□□ -1.51
HOXB3P14651 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.62□□□□□ -1.51
HOXB3P14651 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC5.62□□□□□ -1.51
HOXB3P14651 AL450326.2-201ENST00000421913 1962 ntBASIC5.62□□□□□ -1.51
HOXB3P14651 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.62□□□□□ -1.51
HOXB3P14651 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HOXB3P14651 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HOXB3P14651 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.62□□□□□ -1.51
HOXB3P14651 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
HOXB3P14651 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms