Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CLDN1O95832 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC2.8□□□□□ -1.96
CLDN1O95832 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.8□□□□□ -1.96
CLDN1O95832 FAM35BP-202ENST00000497389 3337 ntBASIC2.8□□□□□ -1.96
CLDN1O95832 MTND5P17-201ENST00000418405 1603 ntBASIC2.79□□□□□ -1.96
CLDN1O95832 AC000403.1-201ENST00000613696 3585 ntBASIC2.79□□□□□ -1.96
CLDN1O95832 ZNF680P1-201ENST00000436625 1469 ntBASIC2.79□□□□□ -1.96
CLDN1O95832 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
CLDN1O95832 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CLDN1O95832 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
CLDN1O95832 AC062016.1-201ENST00000355719 319 ntBASIC2.79□□□□□ -1.96
CLDN1O95832 RNU1-70P-201ENST00000362618 164 ntBASIC2.79□□□□□ -1.96
CLDN1O95832 RNA5SP383-201ENST00000362934 120 ntBASIC2.79□□□□□ -1.96
CLDN1O95832 RNU6-1085P-201ENST00000363576 107 ntBASIC2.79□□□□□ -1.96
CLDN1O95832 RNU6-1322P-201ENST00000364309 107 ntBASIC2.79□□□□□ -1.96
CLDN1O95832 Y_RNA.248-201ENST00000364501 109 ntBASIC2.79□□□□□ -1.96
CLDN1O95832 Y_RNA.256-201ENST00000364594 104 ntBASIC2.79□□□□□ -1.96
CLDN1O95832 RNU6-1283P-201ENST00000365314 105 ntBASIC2.79□□□□□ -1.96
CLDN1O95832 RNU6-805P-201ENST00000365643 106 ntBASIC2.79□□□□□ -1.96
CLDN1O95832 SMIM11P1-201ENST00000369586 178 ntBASIC2.79□□□□□ -1.96
CLDN1O95832 MIR514A1-201ENST00000385133 98 ntBASIC2.79□□□□□ -1.96
CLDN1O95832 MIR454-201ENST00000390180 115 ntBASIC2.79□□□□□ -1.96
CLDN1O95832 AL590002.1-201ENST00000406554 418 ntBASIC2.79□□□□□ -1.96
CLDN1O95832 RNU2-39P-201ENST00000410604 198 ntBASIC2.79□□□□□ -1.96
CLDN1O95832 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CLDN1O95832 AL451054.2-201ENST00000420896 202 ntBASIC2.79□□□□□ -1.96
CLDN1O95832 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.79□□□□□ -1.96
CLDN1O95832 NUP35P1-201ENST00000422734 947 ntBASIC2.79□□□□□ -1.96
CLDN1O95832 NDUFB4P7-201ENST00000423198 363 ntBASIC2.79□□□□□ -1.96
CLDN1O95832 MTATP6P16-201ENST00000434543 526 ntBASIC2.79□□□□□ -1.96
CLDN1O95832 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC2.79□□□□□ -1.96
CLDN1O95832 DDX3P2-201ENST00000446138 111 ntBASIC2.79□□□□□ -1.96
CLDN1O95832 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.79□□□□□ -1.96
CLDN1O95832 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.79□□□□□ -1.96
CLDN1O95832 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2.79□□□□□ -1.96
CLDN1O95832 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.79□□□□□ -1.96
CLDN1O95832 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.79□□□□□ -1.96
CLDN1O95832 AC109927.2-201ENST00000506416 303 ntBASIC2.79□□□□□ -1.96
CLDN1O95832 AC105914.1-201ENST00000511798 226 ntBASIC2.79□□□□□ -1.96
CLDN1O95832 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.79□□□□□ -1.96
CLDN1O95832 SNORA40.12-201ENST00000516329 111 ntBASIC2.79□□□□□ -1.96
CLDN1O95832 SCARNA15.2-201ENST00000516409 127 ntBASIC2.79□□□□□ -1.96
CLDN1O95832 RNU6-1178P-201ENST00000516674 107 ntBASIC2.79□□□□□ -1.96
CLDN1O95832 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.79□□□□□ -1.96
CLDN1O95832 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC2.79□□□□□ -1.96
CLDN1O95832 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.79□□□□□ -1.96
CLDN1O95832 AC015917.1-201ENST00000579654 510 ntBASIC2.79□□□□□ -1.96
CLDN1O95832 MIR2682-201ENST00000580305 110 ntBASIC2.79□□□□□ -1.96
CLDN1O95832 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC2.79□□□□□ -1.96
CLDN1O95832 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC2.79□□□□□ -1.96
CLDN1O95832 AP001029.3-201ENST00000588063 596 ntBASIC2.79□□□□□ -1.96
CLDN1O95832 AC007621.1-201ENST00000604544 437 ntBASIC2.79□□□□□ -1.96
CLDN1O95832 RBM11P1-201ENST00000604951 799 ntBASIC2.79□□□□□ -1.96
CLDN1O95832 AL390240.1-201ENST00000612950 384 ntBASIC2.79□□□□□ -1.96
CLDN1O95832 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.79□□□□□ -1.96
CLDN1O95832 MIR7843-201ENST00000622274 79 ntBASIC2.79□□□□□ -1.96
CLDN1O95832 AC093648.1-201ENST00000623546 606 ntBASIC2.79□□□□□ -1.96
CLDN1O95832 MIR1321-201ENST00000637766 79 ntBASIC2.79□□□□□ -1.96
CLDN1O95832 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.78□□□□□ -1.96
CLDN1O95832 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC2.78□□□□□ -1.96
CLDN1O95832 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.78□□□□□ -1.96
CLDN1O95832 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CLDN1O95832 AL139276.1-201ENST00000311910 1001 ntBASIC2.78□□□□□ -1.96
CLDN1O95832 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
CLDN1O95832 RNU4-48P-201ENST00000365559 182 ntBASIC2.78□□□□□ -1.96
CLDN1O95832 Y_RNA.409-201ENST00000383990 98 ntBASIC2.78□□□□□ -1.96
CLDN1O95832 RNU6-1158P-201ENST00000391167 107 ntBASIC2.78□□□□□ -1.96
CLDN1O95832 AC068050.1-201ENST00000394891 380 ntBASIC2.78□□□□□ -1.96
CLDN1O95832 NDUFS5P1-201ENST00000405668 289 ntBASIC2.78□□□□□ -1.96
CLDN1O95832 RN7SKP220-201ENST00000410611 288 ntBASIC2.78□□□□□ -1.96
CLDN1O95832 SDCBPP3-201ENST00000419629 891 ntBASIC2.78□□□□□ -1.96
CLDN1O95832 AC018630.2-202ENST00000422992 927 ntBASIC2.78□□□□□ -1.96
CLDN1O95832 AC008850.1-201ENST00000427546 362 ntBASIC2.78□□□□□ -1.96
CLDN1O95832 AC022018.1-201ENST00000430685 241 ntBASIC2.78□□□□□ -1.96
CLDN1O95832 AC105272.1-201ENST00000438604 198 ntBASIC2.78□□□□□ -1.96
CLDN1O95832 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.78□□□□□ -1.96
CLDN1O95832 EEF1B2P7-201ENST00000451177 676 ntBASIC2.78□□□□□ -1.96
CLDN1O95832 AL109933.2-201ENST00000452651 260 ntBASIC2.78□□□□□ -1.96
CLDN1O95832 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.78□□□□□ -1.96
CLDN1O95832 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.78□□□□□ -1.96
CLDN1O95832 RNU6-420P-201ENST00000458780 107 ntBASIC2.78□□□□□ -1.96
CLDN1O95832 MRPS17P3-201ENST00000465453 385 ntBASIC2.78□□□□□ -1.96
CLDN1O95832 RPL36AP51-201ENST00000487216 318 ntBASIC2.78□□□□□ -1.96
CLDN1O95832 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.78□□□□□ -1.96
CLDN1O95832 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC2.78□□□□□ -1.96
CLDN1O95832 SNORA70.16-201ENST00000516390 95 ntBASIC2.78□□□□□ -1.96
CLDN1O95832 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.78□□□□□ -1.96
CLDN1O95832 AP006587.4-201ENST00000526053 529 ntBASIC2.78□□□□□ -1.96
CLDN1O95832 AC109635.3-201ENST00000529536 185 ntBASIC2.78□□□□□ -1.96
CLDN1O95832 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.78□□□□□ -1.96
CLDN1O95832 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC2.78□□□□□ -1.96
CLDN1O95832 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC2.78□□□□□ -1.96
CLDN1O95832 AC025678.1-201ENST00000567861 338 ntBASIC2.78□□□□□ -1.96
CLDN1O95832 MIR4769-201ENST00000584126 77 ntBASIC2.78□□□□□ -1.96
CLDN1O95832 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.78□□□□□ -1.96
CLDN1O95832 SRP54-214ENST00000630962 162 ntTSL 5 BASIC2.78□□□□□ -1.96
CLDN1O95832 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.78□□□□□ -1.96
CLDN1O95832 AC093908.1-201ENST00000623125 8092 ntBASIC2.78□□□□□ -1.96
CLDN1O95832 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.97
CLDN1O95832 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.78□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms