Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.6□□□□□ -1.99
ATG4BQ9Y4P1 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.6□□□□□ -1.99
ATG4BQ9Y4P1 MTND4LP5-201ENST00000605152 292 ntBASIC2.6□□□□□ -1.99
ATG4BQ9Y4P1 AC004805.2-201ENST00000605382 482 ntBASIC2.6□□□□□ -1.99
ATG4BQ9Y4P1 DUSP12P1-201ENST00000612874 516 ntBASIC2.6□□□□□ -1.99
ATG4BQ9Y4P1 MIR6733-201ENST00000635723 61 ntBASIC2.6□□□□□ -1.99
ATG4BQ9Y4P1 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.6□□□□□ -1.99
ATG4BQ9Y4P1 ASNSP3-201ENST00000451989 1306 ntBASIC2.6□□□□□ -1.99
ATG4BQ9Y4P1 AC026241.1-201ENST00000517873 2142 ntBASIC2.6□□□□□ -1.99
ATG4BQ9Y4P1 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.6□□□□□ -1.99
ATG4BQ9Y4P1 ELF2P3-201ENST00000445099 1506 ntBASIC2.59□□□□□ -1.99
ATG4BQ9Y4P1 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
ATG4BQ9Y4P1 RNU5E-1-201ENST00000362477 120 ntBASIC2.59□□□□□ -1.99
ATG4BQ9Y4P1 RNU6-511P-201ENST00000363496 107 ntBASIC2.59□□□□□ -1.99
ATG4BQ9Y4P1 RNU6-288P-201ENST00000363690 104 ntBASIC2.59□□□□□ -1.99
ATG4BQ9Y4P1 RNU1-112P-201ENST00000364401 164 ntBASIC2.59□□□□□ -1.99
ATG4BQ9Y4P1 SNORA68.1-201ENST00000364537 132 ntBASIC2.59□□□□□ -1.99
ATG4BQ9Y4P1 RN7SKP226-201ENST00000364912 300 ntBASIC2.59□□□□□ -1.99
ATG4BQ9Y4P1 Y_RNA.510-201ENST00000384511 114 ntBASIC2.59□□□□□ -1.99
ATG4BQ9Y4P1 SNORA40.3-201ENST00000390964 122 ntBASIC2.59□□□□□ -1.99
ATG4BQ9Y4P1 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
ATG4BQ9Y4P1 AL513475.1-201ENST00000406602 315 ntBASIC2.59□□□□□ -1.99
ATG4BQ9Y4P1 RNU2-68P-201ENST00000410878 191 ntBASIC2.59□□□□□ -1.99
ATG4BQ9Y4P1 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.59□□□□□ -1.99
ATG4BQ9Y4P1 HMGN1P14-201ENST00000412459 517 ntBASIC2.59□□□□□ -1.99
ATG4BQ9Y4P1 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.59□□□□□ -1.99
ATG4BQ9Y4P1 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.59□□□□□ -1.99
ATG4BQ9Y4P1 SLC44A3-AS1-205ENST00000424505 612 ntBASIC2.59□□□□□ -1.99
ATG4BQ9Y4P1 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC2.59□□□□□ -1.99
ATG4BQ9Y4P1 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.59□□□□□ -1.99
ATG4BQ9Y4P1 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC2.59□□□□□ -1.99
ATG4BQ9Y4P1 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC2.59□□□□□ -1.99
ATG4BQ9Y4P1 MTND4P25-201ENST00000441039 533 ntBASIC2.59□□□□□ -1.99
ATG4BQ9Y4P1 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.59□□□□□ -1.99
ATG4BQ9Y4P1 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.59□□□□□ -1.99
ATG4BQ9Y4P1 SNRPFP4-201ENST00000456366 242 ntBASIC2.59□□□□□ -1.99
ATG4BQ9Y4P1 AC103975.1-201ENST00000482506 483 ntBASIC2.59□□□□□ -1.99
ATG4BQ9Y4P1 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC2.59□□□□□ -1.99
ATG4BQ9Y4P1 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.59□□□□□ -1.99
ATG4BQ9Y4P1 AC091965.2-201ENST00000512324 613 ntBASIC2.59□□□□□ -1.99
ATG4BQ9Y4P1 RNA5SP356-201ENST00000515972 94 ntBASIC2.59□□□□□ -1.99
ATG4BQ9Y4P1 RNU2-10P-201ENST00000516375 211 ntBASIC2.59□□□□□ -1.99
ATG4BQ9Y4P1 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.59□□□□□ -1.99
ATG4BQ9Y4P1 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.59□□□□□ -1.99
ATG4BQ9Y4P1 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.59□□□□□ -1.99
ATG4BQ9Y4P1 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
ATG4BQ9Y4P1 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC2.59□□□□□ -1.99
ATG4BQ9Y4P1 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.59□□□□□ -1.99
ATG4BQ9Y4P1 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC2.59□□□□□ -1.99
ATG4BQ9Y4P1 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
ATG4BQ9Y4P1 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.59□□□□□ -1.99
ATG4BQ9Y4P1 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.59□□□□□ -1.99
ATG4BQ9Y4P1 AC174048.1-201ENST00000603389 144 ntBASIC2.59□□□□□ -1.99
ATG4BQ9Y4P1 AL359198.2-201ENST00000611836 194 ntBASIC2.59□□□□□ -1.99
ATG4BQ9Y4P1 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.59□□□□□ -1.99
ATG4BQ9Y4P1 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.59□□□□□ -2
ATG4BQ9Y4P1 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
ATG4BQ9Y4P1 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
ATG4BQ9Y4P1 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.58□□□□□ -2
ATG4BQ9Y4P1 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.58□□□□□ -2
ATG4BQ9Y4P1 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.58□□□□□ -2
ATG4BQ9Y4P1 RNU6-188P-201ENST00000364207 107 ntBASIC2.58□□□□□ -2
ATG4BQ9Y4P1 RNU1-73P-201ENST00000383971 164 ntBASIC2.58□□□□□ -2
ATG4BQ9Y4P1 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.58□□□□□ -2
ATG4BQ9Y4P1 SNORD88.1-201ENST00000408684 91 ntBASIC2.58□□□□□ -2
ATG4BQ9Y4P1 RNA5SP492-201ENST00000411330 114 ntBASIC2.58□□□□□ -2
ATG4BQ9Y4P1 RPL19P1-201ENST00000411635 428 ntBASIC2.58□□□□□ -2
ATG4BQ9Y4P1 RPS3AP3-201ENST00000411933 242 ntBASIC2.58□□□□□ -2
ATG4BQ9Y4P1 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.58□□□□□ -2
ATG4BQ9Y4P1 AL513477.1-202ENST00000417061 214 ntBASIC2.58□□□□□ -2
ATG4BQ9Y4P1 ELOCP4-201ENST00000420090 333 ntBASIC2.58□□□□□ -2
ATG4BQ9Y4P1 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.58□□□□□ -2
ATG4BQ9Y4P1 GPM6BP2-201ENST00000432046 144 ntBASIC2.58□□□□□ -2
ATG4BQ9Y4P1 AC112220.1-201ENST00000434628 355 ntBASIC2.58□□□□□ -2
ATG4BQ9Y4P1 RPS15AP5-201ENST00000436276 388 ntBASIC2.58□□□□□ -2
ATG4BQ9Y4P1 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.58□□□□□ -2
ATG4BQ9Y4P1 GPM6BP1-201ENST00000446387 144 ntBASIC2.58□□□□□ -2
ATG4BQ9Y4P1 RPL23AP20-201ENST00000447965 421 ntBASIC2.58□□□□□ -2
ATG4BQ9Y4P1 ST13P20-201ENST00000447996 1065 ntBASIC2.58□□□□□ -2
ATG4BQ9Y4P1 MTATP6P7-201ENST00000453315 681 ntBASIC2.58□□□□□ -2
ATG4BQ9Y4P1 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.58□□□□□ -2
ATG4BQ9Y4P1 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.58□□□□□ -2
ATG4BQ9Y4P1 AC090525.1-201ENST00000479116 478 ntBASIC2.58□□□□□ -2
ATG4BQ9Y4P1 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.58□□□□□ -2
ATG4BQ9Y4P1 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC2.58□□□□□ -2
ATG4BQ9Y4P1 RN7SKP132-201ENST00000516001 208 ntBASIC2.58□□□□□ -2
ATG4BQ9Y4P1 AC090136.1-201ENST00000520009 240 ntBASIC2.58□□□□□ -2
ATG4BQ9Y4P1 AP002453.2-201ENST00000533503 320 ntBASIC2.58□□□□□ -2
ATG4BQ9Y4P1 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.58□□□□□ -2
ATG4BQ9Y4P1 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.58□□□□□ -2
ATG4BQ9Y4P1 AC137800.2-201ENST00000574375 120 ntBASIC2.58□□□□□ -2
ATG4BQ9Y4P1 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC2.58□□□□□ -2
ATG4BQ9Y4P1 Z94722.1-201ENST00000604328 474 ntBASIC2.58□□□□□ -2
ATG4BQ9Y4P1 AC007363.1-201ENST00000604736 620 ntBASIC2.58□□□□□ -2
ATG4BQ9Y4P1 AC108479.2-201ENST00000617314 601 ntBASIC2.58□□□□□ -2
ATG4BQ9Y4P1 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC2.58□□□□□ -2
ATG4BQ9Y4P1 AC110994.2-201ENST00000635481 492 ntBASIC2.58□□□□□ -2
ATG4BQ9Y4P1 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.58□□□□□ -2
ATG4BQ9Y4P1 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.58□□□□□ -2
ATG4BQ9Y4P1 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 121.9 ms