Protein–RNA interactions for Protein: Q9UKV0

HDAC9, Histone deacetylase 9, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9Q9UKV0 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
HDAC9Q9UKV0 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
HDAC9Q9UKV0 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
HDAC9Q9UKV0 AL513302.2-201ENST00000562313 1842 ntBASIC3.93□□□□□ -1.78
HDAC9Q9UKV0 AC017071.1-201ENST00000564407 2204 ntBASIC3.93□□□□□ -1.78
HDAC9Q9UKV0 Y_RNA.89-201ENST00000363031 102 ntBASIC3.93□□□□□ -1.78
HDAC9Q9UKV0 RNU6-188P-201ENST00000364207 107 ntBASIC3.93□□□□□ -1.78
HDAC9Q9UKV0 MIR493-201ENST00000385254 89 ntBASIC3.93□□□□□ -1.78
HDAC9Q9UKV0 RPS4XP3-201ENST00000398541 413 ntBASIC3.93□□□□□ -1.78
HDAC9Q9UKV0 RNU6-908P-201ENST00000410160 94 ntBASIC3.93□□□□□ -1.78
HDAC9Q9UKV0 RNU2-39P-201ENST00000410604 198 ntBASIC3.93□□□□□ -1.78
HDAC9Q9UKV0 AC126124.2-201ENST00000413542 321 ntBASIC3.93□□□□□ -1.78
HDAC9Q9UKV0 MRPL50P2-201ENST00000416821 482 ntBASIC3.93□□□□□ -1.78
HDAC9Q9UKV0 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.93□□□□□ -1.78
HDAC9Q9UKV0 AL590664.1-201ENST00000448065 339 ntBASIC3.93□□□□□ -1.78
HDAC9Q9UKV0 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.93□□□□□ -1.78
HDAC9Q9UKV0 AL356010.1-201ENST00000456364 102 ntBASIC3.93□□□□□ -1.78
HDAC9Q9UKV0 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.93□□□□□ -1.78
HDAC9Q9UKV0 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.93□□□□□ -1.78
HDAC9Q9UKV0 RPS29P25-201ENST00000481709 171 ntBASIC3.93□□□□□ -1.78
HDAC9Q9UKV0 AC116353.2-201ENST00000505332 712 ntBASIC3.93□□□□□ -1.78
HDAC9Q9UKV0 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
HDAC9Q9UKV0 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC3.93□□□□□ -1.78
HDAC9Q9UKV0 AL359273.1-201ENST00000510918 627 ntBASIC3.93□□□□□ -1.78
HDAC9Q9UKV0 RNU6-1281P-201ENST00000516223 105 ntBASIC3.93□□□□□ -1.78
HDAC9Q9UKV0 RNU6-835P-201ENST00000516974 104 ntBASIC3.93□□□□□ -1.78
HDAC9Q9UKV0 RNU6-711P-201ENST00000517255 106 ntBASIC3.93□□□□□ -1.78
HDAC9Q9UKV0 AC093012.1-202ENST00000549403 582 ntBASIC3.93□□□□□ -1.78
HDAC9Q9UKV0 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.93□□□□□ -1.78
HDAC9Q9UKV0 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.93□□□□□ -1.78
HDAC9Q9UKV0 AC068135.2-201ENST00000569293 1028 ntBASIC3.93□□□□□ -1.78
HDAC9Q9UKV0 AC024619.4-201ENST00000580924 316 ntBASIC3.93□□□□□ -1.78
HDAC9Q9UKV0 RNVU1-4-201ENST00000612985 164 ntBASIC3.93□□□□□ -1.78
HDAC9Q9UKV0 AL138880.2-201ENST00000616214 239 ntBASIC3.93□□□□□ -1.78
HDAC9Q9UKV0 AC002553.4-201ENST00000616896 331 ntBASIC3.93□□□□□ -1.78
HDAC9Q9UKV0 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.93□□□□□ -1.78
HDAC9Q9UKV0 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.93□□□□□ -1.78
HDAC9Q9UKV0 AC110774.1-201ENST00000623567 2018 ntBASIC3.93□□□□□ -1.78
HDAC9Q9UKV0 AC004520.1-201ENST00000608362 1413 ntBASIC3.93□□□□□ -1.78
HDAC9Q9UKV0 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.93□□□□□ -1.78
HDAC9Q9UKV0 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
HDAC9Q9UKV0 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.93□□□□□ -1.78
HDAC9Q9UKV0 AC092326.2-201ENST00000624772 1561 ntBASIC3.93□□□□□ -1.78
HDAC9Q9UKV0 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
HDAC9Q9UKV0 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.92□□□□□ -1.78
HDAC9Q9UKV0 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.92□□□□□ -1.78
HDAC9Q9UKV0 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.92□□□□□ -1.78
HDAC9Q9UKV0 AC073343.1-201ENST00000328239 651 ntBASIC3.92□□□□□ -1.78
HDAC9Q9UKV0 RNU4-48P-201ENST00000365559 182 ntBASIC3.92□□□□□ -1.78
HDAC9Q9UKV0 MIR454-201ENST00000390180 115 ntBASIC3.92□□□□□ -1.78
HDAC9Q9UKV0 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
HDAC9Q9UKV0 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC3.92□□□□□ -1.78
HDAC9Q9UKV0 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC3.92□□□□□ -1.78
HDAC9Q9UKV0 RAC1P6-201ENST00000423911 575 ntBASIC3.92□□□□□ -1.78
HDAC9Q9UKV0 AC093106.2-201ENST00000428212 385 ntBASIC3.92□□□□□ -1.78
HDAC9Q9UKV0 AL353705.1-201ENST00000433468 480 ntBASIC3.92□□□□□ -1.78
HDAC9Q9UKV0 RPL36AP6-201ENST00000435770 321 ntBASIC3.92□□□□□ -1.78
HDAC9Q9UKV0 MTATP6P23-201ENST00000440153 476 ntBASIC3.92□□□□□ -1.78
HDAC9Q9UKV0 AC016691.1-201ENST00000441321 413 ntBASIC3.92□□□□□ -1.78
HDAC9Q9UKV0 DDX3P2-201ENST00000446138 111 ntBASIC3.92□□□□□ -1.78
HDAC9Q9UKV0 NFU1P2-201ENST00000448700 469 ntBASIC3.92□□□□□ -1.78
HDAC9Q9UKV0 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.92□□□□□ -1.78
HDAC9Q9UKV0 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.92□□□□□ -1.78
HDAC9Q9UKV0 HSPE1P6-201ENST00000479457 291 ntBASIC3.92□□□□□ -1.78
HDAC9Q9UKV0 AC069439.1-201ENST00000494739 167 ntBASIC3.92□□□□□ -1.78
HDAC9Q9UKV0 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.92□□□□□ -1.78
HDAC9Q9UKV0 AC116562.3-201ENST00000506136 177 ntBASIC3.92□□□□□ -1.78
HDAC9Q9UKV0 AC068587.5-201ENST00000528506 175 ntBASIC3.92□□□□□ -1.78
HDAC9Q9UKV0 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.92□□□□□ -1.78
HDAC9Q9UKV0 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.92□□□□□ -1.78
HDAC9Q9UKV0 MIR4435-1-201ENST00000582552 80 ntBASIC3.92□□□□□ -1.78
HDAC9Q9UKV0 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.92□□□□□ -1.78
HDAC9Q9UKV0 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.92□□□□□ -1.78
HDAC9Q9UKV0 AL162413.1-201ENST00000603198 110 ntBASIC3.92□□□□□ -1.78
HDAC9Q9UKV0 AC008536.2-201ENST00000607284 349 ntBASIC3.92□□□□□ -1.78
HDAC9Q9UKV0 FRG1KP-201ENST00000623592 341 ntBASIC3.92□□□□□ -1.78
HDAC9Q9UKV0 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
HDAC9Q9UKV0 MAPK10-322ENST00000641485 4530 ntBASIC3.92□□□□□ -1.78
HDAC9Q9UKV0 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
HDAC9Q9UKV0 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
HDAC9Q9UKV0 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
HDAC9Q9UKV0 AC009487.2-201ENST00000420969 6821 ntBASIC3.92□□□□□ -1.78
HDAC9Q9UKV0 AC008568.2-201ENST00000623862 2313 ntBASIC3.92□□□□□ -1.78
HDAC9Q9UKV0 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
HDAC9Q9UKV0 Y_RNA.38-201ENST00000362617 102 ntBASIC3.91□□□□□ -1.78
HDAC9Q9UKV0 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
HDAC9Q9UKV0 SMIM11P1-201ENST00000369586 178 ntBASIC3.91□□□□□ -1.78
HDAC9Q9UKV0 Y_RNA.390-201ENST00000383932 102 ntBASIC3.91□□□□□ -1.78
HDAC9Q9UKV0 RNU6-641P-201ENST00000384006 107 ntBASIC3.91□□□□□ -1.78
HDAC9Q9UKV0 OR51A5P-201ENST00000415429 942 ntBASIC3.91□□□□□ -1.78
HDAC9Q9UKV0 MTND4LP11-201ENST00000422184 280 ntBASIC3.91□□□□□ -1.78
HDAC9Q9UKV0 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
HDAC9Q9UKV0 TMEM167AP1-201ENST00000423409 219 ntBASIC3.91□□□□□ -1.78
HDAC9Q9UKV0 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.91□□□□□ -1.78
HDAC9Q9UKV0 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.91□□□□□ -1.78
HDAC9Q9UKV0 NDUFB4P6-201ENST00000436819 366 ntBASIC3.91□□□□□ -1.78
HDAC9Q9UKV0 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.91□□□□□ -1.78
HDAC9Q9UKV0 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.91□□□□□ -1.78
HDAC9Q9UKV0 BNIP3P2-201ENST00000441221 577 ntBASIC3.91□□□□□ -1.78
HDAC9Q9UKV0 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 9.9 ms