Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CNTN3Q9P232 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
CNTN3Q9P232 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CNTN3Q9P232 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
CNTN3Q9P232 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CNTN3Q9P232 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.87□□□□□ -1.63
CNTN3Q9P232 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CNTN3Q9P232 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
CNTN3Q9P232 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CNTN3Q9P232 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CNTN3Q9P232 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CNTN3Q9P232 RNA5SP509-201ENST00000364577 119 ntBASIC4.86□□□□□ -1.63
CNTN3Q9P232 RNU6-384P-201ENST00000364900 104 ntBASIC4.86□□□□□ -1.63
CNTN3Q9P232 SNORA62-201ENST00000365493 153 ntBASIC4.86□□□□□ -1.63
CNTN3Q9P232 Y_RNA.416-201ENST00000384014 113 ntBASIC4.86□□□□□ -1.63
CNTN3Q9P232 MIR921-201ENST00000401133 56 ntBASIC4.86□□□□□ -1.63
CNTN3Q9P232 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.86□□□□□ -1.63
CNTN3Q9P232 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC4.86□□□□□ -1.63
CNTN3Q9P232 RPEP5-201ENST00000441137 268 ntBASIC4.86□□□□□ -1.63
CNTN3Q9P232 AC011276.1-201ENST00000469688 323 ntBASIC4.86□□□□□ -1.63
CNTN3Q9P232 RRN3P3-201ENST00000549207 578 ntBASIC4.86□□□□□ -1.63
CNTN3Q9P232 FAM60BP-201ENST00000578364 658 ntBASIC4.86□□□□□ -1.63
CNTN3Q9P232 AC012433.1-201ENST00000588916 398 ntBASIC4.86□□□□□ -1.63
CNTN3Q9P232 AC091979.2-201ENST00000607514 214 ntBASIC4.86□□□□□ -1.63
CNTN3Q9P232 AC083809.1-201ENST00000615051 472 ntBASIC4.86□□□□□ -1.63
CNTN3Q9P232 MIR6891-201ENST00000618788 93 ntBASIC4.86□□□□□ -1.63
CNTN3Q9P232 MIR6758-201ENST00000620653 63 ntBASIC4.86□□□□□ -1.63
CNTN3Q9P232 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
CNTN3Q9P232 AC116096.1-201ENST00000566804 2314 ntBASIC4.86□□□□□ -1.63
CNTN3Q9P232 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
CNTN3Q9P232 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CNTN3Q9P232 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CNTN3Q9P232 AL672167.1-203ENST00000641299 2975 ntBASIC4.86□□□□□ -1.63
CNTN3Q9P232 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
CNTN3Q9P232 Z75746.1-201ENST00000440243 2080 ntBASIC4.85□□□□□ -1.63
CNTN3Q9P232 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.85□□□□□ -1.63
CNTN3Q9P232 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CNTN3Q9P232 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.85□□□□□ -1.63
CNTN3Q9P232 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
CNTN3Q9P232 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CNTN3Q9P232 Y_RNA.27-201ENST00000362540 103 ntBASIC4.85□□□□□ -1.63
CNTN3Q9P232 SNORA7.2-201ENST00000364446 145 ntBASIC4.85□□□□□ -1.63
CNTN3Q9P232 RNA5SP167-201ENST00000365461 116 ntBASIC4.85□□□□□ -1.63
CNTN3Q9P232 RNU6-827P-201ENST00000365553 106 ntBASIC4.85□□□□□ -1.63
CNTN3Q9P232 AL592148.1-201ENST00000413568 445 ntBASIC4.85□□□□□ -1.63
CNTN3Q9P232 RAC1P3-201ENST00000416129 580 ntBASIC4.85□□□□□ -1.63
CNTN3Q9P232 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC4.85□□□□□ -1.63
CNTN3Q9P232 AC096920.1-201ENST00000423991 241 ntBASIC4.85□□□□□ -1.63
CNTN3Q9P232 AC087650.1-201ENST00000431445 468 ntBASIC4.85□□□□□ -1.63
CNTN3Q9P232 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC4.85□□□□□ -1.63
CNTN3Q9P232 AC004383.1-201ENST00000438135 289 ntBASIC4.85□□□□□ -1.63
CNTN3Q9P232 HMGN2P21-201ENST00000447764 270 ntBASIC4.85□□□□□ -1.63
CNTN3Q9P232 RPS20P22-201ENST00000473700 357 ntBASIC4.85□□□□□ -1.63
CNTN3Q9P232 AL049874.1-201ENST00000489560 388 ntBASIC4.85□□□□□ -1.63
CNTN3Q9P232 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC4.85□□□□□ -1.63
CNTN3Q9P232 RNU6-138P-201ENST00000515952 107 ntBASIC4.85□□□□□ -1.63
CNTN3Q9P232 Y_RNA.713-201ENST00000517013 96 ntBASIC4.85□□□□□ -1.63
CNTN3Q9P232 SNORA31.20-201ENST00000517111 133 ntBASIC4.85□□□□□ -1.63
CNTN3Q9P232 RNU6-111P-201ENST00000517179 105 ntBASIC4.85□□□□□ -1.63
CNTN3Q9P232 IGLVIV-65-201ENST00000517313 360 ntBASIC4.85□□□□□ -1.63
CNTN3Q9P232 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.85□□□□□ -1.63
CNTN3Q9P232 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CNTN3Q9P232 AC006077.1-201ENST00000604746 343 ntBASIC4.85□□□□□ -1.63
CNTN3Q9P232 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC4.85□□□□□ -1.63
CNTN3Q9P232 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CNTN3Q9P232 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
CNTN3Q9P232 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
CNTN3Q9P232 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CNTN3Q9P232 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.85□□□□□ -1.63
CNTN3Q9P232 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CNTN3Q9P232 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
CNTN3Q9P232 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.84□□□□□ -1.63
CNTN3Q9P232 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.84□□□□□ -1.63
CNTN3Q9P232 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
CNTN3Q9P232 OR4G2P-202ENST00000641004 1759 ntBASIC4.84□□□□□ -1.63
CNTN3Q9P232 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CNTN3Q9P232 MIR335-201ENST00000362173 94 ntBASIC4.84□□□□□ -1.63
CNTN3Q9P232 U3.13-201ENST00000364804 214 ntBASIC4.84□□□□□ -1.63
CNTN3Q9P232 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC4.84□□□□□ -1.63
CNTN3Q9P232 AL022722.2-201ENST00000402519 180 ntBASIC4.84□□□□□ -1.63
CNTN3Q9P232 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC4.84□□□□□ -1.63
CNTN3Q9P232 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.84□□□□□ -1.63
CNTN3Q9P232 AL627311.1-201ENST00000431514 115 ntBASIC4.84□□□□□ -1.63
CNTN3Q9P232 MYL8P-204ENST00000431574 518 ntBASIC4.84□□□□□ -1.63
CNTN3Q9P232 MTND5P15-201ENST00000434246 349 ntBASIC4.84□□□□□ -1.63
CNTN3Q9P232 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.84□□□□□ -1.63
CNTN3Q9P232 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CNTN3Q9P232 AC012671.1-201ENST00000451912 203 ntBASIC4.84□□□□□ -1.63
CNTN3Q9P232 RN7SKP210-201ENST00000459176 261 ntBASIC4.84□□□□□ -1.63
CNTN3Q9P232 RPS23P7-201ENST00000466210 444 ntBASIC4.84□□□□□ -1.63
CNTN3Q9P232 RN7SL817P-201ENST00000480777 288 ntBASIC4.84□□□□□ -1.63
CNTN3Q9P232 RN7SL810P-201ENST00000493031 276 ntBASIC4.84□□□□□ -1.63
CNTN3Q9P232 GZMAP1-201ENST00000503054 631 ntBASIC4.84□□□□□ -1.63
CNTN3Q9P232 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.84□□□□□ -1.63
CNTN3Q9P232 HMGB3P17-201ENST00000504195 649 ntBASIC4.84□□□□□ -1.63
CNTN3Q9P232 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC4.84□□□□□ -1.63
CNTN3Q9P232 SNORA31.6-201ENST00000516241 130 ntBASIC4.84□□□□□ -1.63
CNTN3Q9P232 SCARNA15.2-201ENST00000516409 127 ntBASIC4.84□□□□□ -1.63
CNTN3Q9P232 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CNTN3Q9P232 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 163.7 ms