Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 RN7SL601P-201ENST00000471221 293 ntBASIC4.81□□□□□ -1.64
CNTNAP4Q9C0A0 RPL22P13-201ENST00000493291 347 ntBASIC4.81□□□□□ -1.64
CNTNAP4Q9C0A0 MTCO3P44-201ENST00000510977 541 ntBASIC4.81□□□□□ -1.64
CNTNAP4Q9C0A0 RNU6-1332P-201ENST00000516666 104 ntBASIC4.81□□□□□ -1.64
CNTNAP4Q9C0A0 RNU6-323P-201ENST00000521915 107 ntBASIC4.81□□□□□ -1.64
CNTNAP4Q9C0A0 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC4.81□□□□□ -1.64
CNTNAP4Q9C0A0 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.81□□□□□ -1.64
CNTNAP4Q9C0A0 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.81□□□□□ -1.64
CNTNAP4Q9C0A0 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC4.81□□□□□ -1.64
CNTNAP4Q9C0A0 AC018889.1-201ENST00000605372 397 ntBASIC4.81□□□□□ -1.64
CNTNAP4Q9C0A0 SNORA62.6-201ENST00000606322 83 ntBASIC4.81□□□□□ -1.64
CNTNAP4Q9C0A0 AC006329.2-201ENST00000611491 394 ntBASIC4.81□□□□□ -1.64
CNTNAP4Q9C0A0 AL021879.1-201ENST00000611756 288 ntBASIC4.81□□□□□ -1.64
CNTNAP4Q9C0A0 AL732372.2-225ENST00000642124 456 ntBASIC4.81□□□□□ -1.64
CNTNAP4Q9C0A0 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CNTNAP4Q9C0A0 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CNTNAP4Q9C0A0 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
CNTNAP4Q9C0A0 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CNTNAP4Q9C0A0 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CNTNAP4Q9C0A0 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.81□□□□□ -1.64
CNTNAP4Q9C0A0 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.81□□□□□ -1.64
CNTNAP4Q9C0A0 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.81□□□□□ -1.64
CNTNAP4Q9C0A0 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.81□□□□□ -1.64
CNTNAP4Q9C0A0 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC4.81□□□□□ -1.64
CNTNAP4Q9C0A0 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CNTNAP4Q9C0A0 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
CNTNAP4Q9C0A0 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CNTNAP4Q9C0A0 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
CNTNAP4Q9C0A0 RNU6-339P-201ENST00000384310 107 ntBASIC4.8□□□□□ -1.64
CNTNAP4Q9C0A0 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC4.8□□□□□ -1.64
CNTNAP4Q9C0A0 AL356968.1-201ENST00000416622 474 ntBASIC4.8□□□□□ -1.64
CNTNAP4Q9C0A0 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.8□□□□□ -1.64
CNTNAP4Q9C0A0 CEP57L1P1-201ENST00000430943 1201 ntBASIC4.8□□□□□ -1.64
CNTNAP4Q9C0A0 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.8□□□□□ -1.64
CNTNAP4Q9C0A0 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC4.8□□□□□ -1.64
CNTNAP4Q9C0A0 RN7SL585P-201ENST00000470538 280 ntBASIC4.8□□□□□ -1.64
CNTNAP4Q9C0A0 AC022493.2-201ENST00000506122 481 ntBASIC4.8□□□□□ -1.64
CNTNAP4Q9C0A0 IGKV2-38-201ENST00000517443 247 ntBASIC4.8□□□□□ -1.64
CNTNAP4Q9C0A0 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC4.8□□□□□ -1.64
CNTNAP4Q9C0A0 AC092447.9-201ENST00000603395 144 ntBASIC4.8□□□□□ -1.64
CNTNAP4Q9C0A0 AL138825.1-201ENST00000618587 192 ntBASIC4.8□□□□□ -1.64
CNTNAP4Q9C0A0 U2.1-201ENST00000618978 145 ntBASIC4.8□□□□□ -1.64
CNTNAP4Q9C0A0 AL589994.2-201ENST00000621124 579 ntBASIC4.8□□□□□ -1.64
CNTNAP4Q9C0A0 AC138627.2-201ENST00000624202 601 ntBASIC4.8□□□□□ -1.64
CNTNAP4Q9C0A0 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.8□□□□□ -1.64
CNTNAP4Q9C0A0 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.8□□□□□ -1.64
CNTNAP4Q9C0A0 AL773545.4-201ENST00000637262 310 ntBASIC4.8□□□□□ -1.64
CNTNAP4Q9C0A0 AL513478.4-201ENST00000641636 310 ntBASIC4.8□□□□□ -1.64
CNTNAP4Q9C0A0 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CNTNAP4Q9C0A0 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CNTNAP4Q9C0A0 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CNTNAP4Q9C0A0 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.8□□□□□ -1.64
CNTNAP4Q9C0A0 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.8□□□□□ -1.64
CNTNAP4Q9C0A0 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.8□□□□□ -1.64
CNTNAP4Q9C0A0 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
CNTNAP4Q9C0A0 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.8□□□□□ -1.64
CNTNAP4Q9C0A0 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CNTNAP4Q9C0A0 AL079305.1-201ENST00000623159 3008 ntBASIC4.79□□□□□ -1.64
CNTNAP4Q9C0A0 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
CNTNAP4Q9C0A0 Y_RNA.39-201ENST00000362620 98 ntBASIC4.79□□□□□ -1.64
CNTNAP4Q9C0A0 RNU6-715P-201ENST00000365204 103 ntBASIC4.79□□□□□ -1.64
CNTNAP4Q9C0A0 Y_RNA.424-201ENST00000384063 103 ntBASIC4.79□□□□□ -1.64
CNTNAP4Q9C0A0 Y_RNA.552-201ENST00000384665 112 ntBASIC4.79□□□□□ -1.64
CNTNAP4Q9C0A0 RNU6-95P-201ENST00000384697 107 ntBASIC4.79□□□□□ -1.64
CNTNAP4Q9C0A0 RNA5SP111-201ENST00000411386 101 ntBASIC4.79□□□□□ -1.64
CNTNAP4Q9C0A0 RPL7P37-201ENST00000425095 738 ntBASIC4.79□□□□□ -1.64
CNTNAP4Q9C0A0 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.79□□□□□ -1.64
CNTNAP4Q9C0A0 FTLP19-201ENST00000433300 394 ntBASIC4.79□□□□□ -1.64
CNTNAP4Q9C0A0 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC4.79□□□□□ -1.64
CNTNAP4Q9C0A0 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC4.79□□□□□ -1.64
CNTNAP4Q9C0A0 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.79□□□□□ -1.64
CNTNAP4Q9C0A0 AC115115.1-201ENST00000449927 248 ntBASIC4.79□□□□□ -1.64
CNTNAP4Q9C0A0 FABP5P13-201ENST00000452144 328 ntBASIC4.79□□□□□ -1.64
CNTNAP4Q9C0A0 BX510359.1-201ENST00000456973 237 ntBASIC4.79□□□□□ -1.64
CNTNAP4Q9C0A0 HMGB3P30-201ENST00000457863 606 ntBASIC4.79□□□□□ -1.64
CNTNAP4Q9C0A0 RAC1P2-201ENST00000511164 579 ntBASIC4.79□□□□□ -1.64
CNTNAP4Q9C0A0 TBCAP3-201ENST00000512475 312 ntBASIC4.79□□□□□ -1.64
CNTNAP4Q9C0A0 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CNTNAP4Q9C0A0 IGLV3-26-201ENST00000520756 302 ntBASIC4.79□□□□□ -1.64
CNTNAP4Q9C0A0 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.79□□□□□ -1.64
CNTNAP4Q9C0A0 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.79□□□□□ -1.64
CNTNAP4Q9C0A0 AC069240.1-201ENST00000548774 375 ntBASIC4.79□□□□□ -1.64
CNTNAP4Q9C0A0 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.79□□□□□ -1.64
CNTNAP4Q9C0A0 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.79□□□□□ -1.64
CNTNAP4Q9C0A0 SUB1P3-201ENST00000564581 315 ntBASIC4.79□□□□□ -1.64
CNTNAP4Q9C0A0 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CNTNAP4Q9C0A0 AC011494.1-201ENST00000596454 237 ntBASIC4.79□□□□□ -1.64
CNTNAP4Q9C0A0 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC4.79□□□□□ -1.64
CNTNAP4Q9C0A0 AC104763.2-201ENST00000604179 382 ntBASIC4.79□□□□□ -1.64
CNTNAP4Q9C0A0 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.79□□□□□ -1.64
CNTNAP4Q9C0A0 AL606534.2-204ENST00000635008 178 ntBASIC4.79□□□□□ -1.64
CNTNAP4Q9C0A0 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CNTNAP4Q9C0A0 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CNTNAP4Q9C0A0 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CNTNAP4Q9C0A0 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CNTNAP4Q9C0A0 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CNTNAP4Q9C0A0 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.79□□□□□ -1.64
CNTNAP4Q9C0A0 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.79□□□□□ -1.64
CNTNAP4Q9C0A0 AC005332.5-201ENST00000591222 2919 ntBASIC4.79□□□□□ -1.64
CNTNAP4Q9C0A0 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms