Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 AC109454.4-201ENST00000623411 649 ntBASIC0.45□□□□□ -2.34
CFAP54Q96N23 AL136313.1-201ENST00000624804 202 ntBASIC0.45□□□□□ -2.34
CFAP54Q96N23 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC0.45□□□□□ -2.34
CFAP54Q96N23 RNU6-112P-201ENST00000363599 104 ntBASIC0.44□□□□□ -2.34
CFAP54Q96N23 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC0.44□□□□□ -2.34
CFAP54Q96N23 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC0.44□□□□□ -2.34
CFAP54Q96N23 SMARCE1P4-201ENST00000523647 241 ntBASIC0.44□□□□□ -2.34
CFAP54Q96N23 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
CFAP54Q96N23 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC0.44□□□□□ -2.34
CFAP54Q96N23 AK6-205ENST00000618980 483 ntTSL 2 BASIC0.44□□□□□ -2.34
CFAP54Q96N23 AL391516.1-201ENST00000554380 2449 ntBASIC0.44□□□□□ -2.34
CFAP54Q96N23 Y_RNA.185-201ENST00000363894 100 ntBASIC0.44□□□□□ -2.34
CFAP54Q96N23 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC0.44□□□□□ -2.34
CFAP54Q96N23 AL353689.1-201ENST00000438895 199 ntBASIC0.44□□□□□ -2.34
CFAP54Q96N23 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC0.44□□□□□ -2.34
CFAP54Q96N23 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC0.44□□□□□ -2.34
CFAP54Q96N23 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.44□□□□□ -2.34
CFAP54Q96N23 Y_RNA.25-201ENST00000362528 102 ntBASIC0.44□□□□□ -2.34
CFAP54Q96N23 MTCO1P56-201ENST00000401674 224 ntBASIC0.44□□□□□ -2.34
CFAP54Q96N23 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC0.44□□□□□ -2.34
CFAP54Q96N23 OFD1P13Y-201ENST00000431179 1232 ntBASIC0.44□□□□□ -2.34
CFAP54Q96N23 SNORD124-201ENST00000459577 104 ntBASIC0.44□□□□□ -2.34
CFAP54Q96N23 AP001485.1-201ENST00000604799 199 ntBASIC0.44□□□□□ -2.34
CFAP54Q96N23 AC103710.4-201ENST00000609301 899 ntBASIC0.44□□□□□ -2.34
CFAP54Q96N23 AL357075.2-201ENST00000614906 189 ntBASIC0.44□□□□□ -2.34
CFAP54Q96N23 AP000776.1-201ENST00000530032 1663 ntBASIC0.43□□□□□ -2.34
CFAP54Q96N23 RNU1-58P-201ENST00000362413 163 ntBASIC0.43□□□□□ -2.34
CFAP54Q96N23 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC0.43□□□□□ -2.34
CFAP54Q96N23 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.43□□□□□ -2.34
CFAP54Q96N23 SYF2P1-201ENST00000550658 413 ntBASIC0.43□□□□□ -2.34
CFAP54Q96N23 AL390240.1-201ENST00000612950 384 ntBASIC0.43□□□□□ -2.34
CFAP54Q96N23 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
CFAP54Q96N23 CBX3P3-201ENST00000508108 532 ntBASIC0.43□□□□□ -2.34
CFAP54Q96N23 RNA5SP67-201ENST00000516422 131 ntBASIC0.43□□□□□ -2.34
CFAP54Q96N23 EIF4EP5-201ENST00000528228 640 ntBASIC0.43□□□□□ -2.34
CFAP54Q96N23 Y_RNA.644-201ENST00000459006 113 ntBASIC0.42□□□□□ -2.34
CFAP54Q96N23 LINC00933-203ENST00000559812 219 ntBASIC0.42□□□□□ -2.34
CFAP54Q96N23 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC0.42□□□□□ -2.34
CFAP54Q96N23 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC0.42□□□□□ -2.34
CFAP54Q96N23 CCNB2P1-201ENST00000399411 1150 ntBASIC0.42□□□□□ -2.34
CFAP54Q96N23 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC0.42□□□□□ -2.34
CFAP54Q96N23 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.42□□□□□ -2.34
CFAP54Q96N23 HSBP1P2-201ENST00000299671 229 ntBASIC0.41□□□□□ -2.34
CFAP54Q96N23 SNORA38-201ENST00000363946 132 ntBASIC0.41□□□□□ -2.34
CFAP54Q96N23 PRELID3BP1-201ENST00000457142 540 ntBASIC0.41□□□□□ -2.34
CFAP54Q96N23 AC135999.1-201ENST00000478962 479 ntBASIC0.41□□□□□ -2.34
CFAP54Q96N23 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC0.41□□□□□ -2.34
CFAP54Q96N23 AC083865.1-201ENST00000636634 831 ntBASIC0.41□□□□□ -2.34
CFAP54Q96N23 MIR26B-201ENST00000362251 77 ntBASIC0.41□□□□□ -2.34
CFAP54Q96N23 HMGN2P21-201ENST00000447764 270 ntBASIC0.41□□□□□ -2.34
CFAP54Q96N23 RNU6-347P-201ENST00000516658 105 ntBASIC0.41□□□□□ -2.34
CFAP54Q96N23 ERHP1-201ENST00000523006 310 ntBASIC0.41□□□□□ -2.34
CFAP54Q96N23 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
CFAP54Q96N23 CLIC4P2-201ENST00000601934 717 ntBASIC0.41□□□□□ -2.34
CFAP54Q96N23 AC090953.1-201ENST00000604305 1092 ntBASIC0.41□□□□□ -2.34
CFAP54Q96N23 uc_338.9-201ENST00000617424 182 ntBASIC0.41□□□□□ -2.34
CFAP54Q96N23 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
CFAP54Q96N23 MIR92A1-201ENST00000385233 78 ntBASIC0.41□□□□□ -2.34
CFAP54Q96N23 AL133384.1-201ENST00000412744 351 ntBASIC0.41□□□□□ -2.34
CFAP54Q96N23 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC0.41□□□□□ -2.34
CFAP54Q96N23 AL358794.1-201ENST00000445689 381 ntBASIC0.41□□□□□ -2.34
CFAP54Q96N23 AC087884.1-201ENST00000469738 328 ntBASIC0.41□□□□□ -2.34
CFAP54Q96N23 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC0.41□□□□□ -2.34
CFAP54Q96N23 RNU1-61P-201ENST00000516107 151 ntBASIC0.41□□□□□ -2.34
CFAP54Q96N23 AL109918.3-201ENST00000603072 338 ntBASIC0.41□□□□□ -2.34
CFAP54Q96N23 AC009220.3-201ENST00000604318 586 ntBASIC0.41□□□□□ -2.34
CFAP54Q96N23 RNU1-96P-201ENST00000364163 162 ntBASIC0.4□□□□□ -2.35
CFAP54Q96N23 AC010099.3-201ENST00000423896 409 ntBASIC0.4□□□□□ -2.35
CFAP54Q96N23 RPL23AP95-201ENST00000426806 265 ntBASIC0.4□□□□□ -2.35
CFAP54Q96N23 SNORA14.1-201ENST00000516113 141 ntBASIC0.4□□□□□ -2.35
CFAP54Q96N23 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC0.4□□□□□ -2.35
CFAP54Q96N23 SNORA51.2-201ENST00000364595 132 ntBASIC0.4□□□□□ -2.35
CFAP54Q96N23 MIR32-201ENST00000384965 70 ntBASIC0.4□□□□□ -2.35
CFAP54Q96N23 AC083875.1-201ENST00000419509 405 ntBASIC0.4□□□□□ -2.35
CFAP54Q96N23 MIR3690-201ENST00000580266 75 ntBASIC0.4□□□□□ -2.35
CFAP54Q96N23 VN1R84P-201ENST00000593697 235 ntBASIC0.4□□□□□ -2.35
CFAP54Q96N23 RNU6-923P-201ENST00000364753 107 ntBASIC0.39□□□□□ -2.35
CFAP54Q96N23 RNU6-1187P-201ENST00000364771 110 ntBASIC0.39□□□□□ -2.35
CFAP54Q96N23 SNORA51.6-201ENST00000384151 125 ntBASIC0.39□□□□□ -2.35
CFAP54Q96N23 Y_RNA.453-201ENST00000384223 109 ntBASIC0.39□□□□□ -2.35
CFAP54Q96N23 AC114737.2-201ENST00000421583 173 ntBASIC0.39□□□□□ -2.35
CFAP54Q96N23 EIF4EP3-201ENST00000498782 656 ntBASIC0.39□□□□□ -2.35
CFAP54Q96N23 RNU4-57P-201ENST00000515980 135 ntBASIC0.39□□□□□ -2.35
CFAP54Q96N23 OSBPL9P3-201ENST00000534523 595 ntBASIC0.39□□□□□ -2.35
CFAP54Q96N23 AC007834.2-201ENST00000536310 343 ntBASIC0.39□□□□□ -2.35
CFAP54Q96N23 AC008945.2-201ENST00000606056 604 ntBASIC0.39□□□□□ -2.35
CFAP54Q96N23 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
CFAP54Q96N23 AC110079.1-202ENST00000635213 138 ntBASIC0.39□□□□□ -2.35
CFAP54Q96N23 AC008163.1-202ENST00000636004 2889 ntBASIC0.39□□□□□ -2.35
CFAP54Q96N23 RNY4P24-201ENST00000362735 96 ntBASIC0.39□□□□□ -2.35
CFAP54Q96N23 SNORA14A-201ENST00000364773 135 ntBASIC0.39□□□□□ -2.35
CFAP54Q96N23 MIR147B-201ENST00000390185 80 ntBASIC0.39□□□□□ -2.35
CFAP54Q96N23 MIR676-201ENST00000390702 67 ntBASIC0.39□□□□□ -2.35
CFAP54Q96N23 OR9R1P-201ENST00000412200 877 ntBASIC0.39□□□□□ -2.35
CFAP54Q96N23 MTCO1P53-201ENST00000441633 699 ntBASIC0.39□□□□□ -2.35
CFAP54Q96N23 Y_RNA.654-201ENST00000497848 106 ntBASIC0.39□□□□□ -2.35
CFAP54Q96N23 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC0.39□□□□□ -2.35
CFAP54Q96N23 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC0.39□□□□□ -2.35
CFAP54Q96N23 SNORA7.2-201ENST00000364446 145 ntBASIC0.39□□□□□ -2.35
CFAP54Q96N23 TMEM167AP1-201ENST00000423409 219 ntBASIC0.39□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms