Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 AC087241.4-201ENST00000612441 480 ntBASIC2.12□□□□□ -2.07
ECHDC3Q96DC8 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC2.12□□□□□ -2.07
ECHDC3Q96DC8 DLEU1_2.1-201ENST00000617920 342 ntBASIC2.12□□□□□ -2.07
ECHDC3Q96DC8 AC010378.1-201ENST00000619270 362 ntBASIC2.12□□□□□ -2.07
ECHDC3Q96DC8 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
ECHDC3Q96DC8 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
ECHDC3Q96DC8 ZNF720P1-201ENST00000562403 1939 ntBASIC2.11□□□□□ -2.07
ECHDC3Q96DC8 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
ECHDC3Q96DC8 AC004944.1-201ENST00000517807 3059 ntBASIC2.11□□□□□ -2.07
ECHDC3Q96DC8 SNORA67.3-201ENST00000384366 140 ntBASIC2.11□□□□□ -2.07
ECHDC3Q96DC8 MIR218-1-201ENST00000384999 110 ntBASIC2.11□□□□□ -2.07
ECHDC3Q96DC8 MIR1305-201ENST00000408300 86 ntBASIC2.11□□□□□ -2.07
ECHDC3Q96DC8 U3.40-201ENST00000408706 208 ntBASIC2.11□□□□□ -2.07
ECHDC3Q96DC8 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.11□□□□□ -2.07
ECHDC3Q96DC8 CYCSP48-201ENST00000417124 323 ntBASIC2.11□□□□□ -2.07
ECHDC3Q96DC8 DNAJA1P2-201ENST00000421360 1197 ntBASIC2.11□□□□□ -2.07
ECHDC3Q96DC8 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
ECHDC3Q96DC8 EIF4EP4-201ENST00000424916 578 ntBASIC2.11□□□□□ -2.07
ECHDC3Q96DC8 AL117351.1-201ENST00000438864 766 ntBASIC2.11□□□□□ -2.07
ECHDC3Q96DC8 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.11□□□□□ -2.07
ECHDC3Q96DC8 ELOCP30-201ENST00000447108 299 ntBASIC2.11□□□□□ -2.07
ECHDC3Q96DC8 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.11□□□□□ -2.07
ECHDC3Q96DC8 RNU7-59P-201ENST00000459101 61 ntBASIC2.11□□□□□ -2.07
ECHDC3Q96DC8 AL121769.1-201ENST00000469473 401 ntBASIC2.11□□□□□ -2.07
ECHDC3Q96DC8 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.11□□□□□ -2.07
ECHDC3Q96DC8 HSPE1P18-201ENST00000517602 280 ntBASIC2.11□□□□□ -2.07
ECHDC3Q96DC8 AC093012.1-202ENST00000549403 582 ntBASIC2.11□□□□□ -2.07
ECHDC3Q96DC8 AC007151.1-201ENST00000572774 483 ntBASIC2.11□□□□□ -2.07
ECHDC3Q96DC8 MIR5571-201ENST00000577998 113 ntBASIC2.11□□□□□ -2.07
ECHDC3Q96DC8 MIR4293-201ENST00000584305 78 ntBASIC2.11□□□□□ -2.07
ECHDC3Q96DC8 MIR4298-201ENST00000584380 73 ntBASIC2.11□□□□□ -2.07
ECHDC3Q96DC8 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.11□□□□□ -2.07
ECHDC3Q96DC8 AC091057.3-201ENST00000602684 733 ntBASIC2.11□□□□□ -2.07
ECHDC3Q96DC8 AC098826.3-201ENST00000603823 466 ntBASIC2.11□□□□□ -2.07
ECHDC3Q96DC8 AL450336.1-201ENST00000605180 586 ntBASIC2.11□□□□□ -2.07
ECHDC3Q96DC8 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
ECHDC3Q96DC8 DUSP12P1-201ENST00000612874 516 ntBASIC2.11□□□□□ -2.07
ECHDC3Q96DC8 AL031601.2-202ENST00000622650 282 ntBASIC2.11□□□□□ -2.07
ECHDC3Q96DC8 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.11□□□□□ -2.07
ECHDC3Q96DC8 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
ECHDC3Q96DC8 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.11□□□□□ -2.07
ECHDC3Q96DC8 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.11□□□□□ -2.07
ECHDC3Q96DC8 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
ECHDC3Q96DC8 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.1□□□□□ -2.07
ECHDC3Q96DC8 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
ECHDC3Q96DC8 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.1□□□□□ -2.07
ECHDC3Q96DC8 AL355497.1-201ENST00000406262 551 ntBASIC2.1□□□□□ -2.07
ECHDC3Q96DC8 NPM1P11-201ENST00000417106 855 ntBASIC2.1□□□□□ -2.07
ECHDC3Q96DC8 ELOCP9-201ENST00000418624 239 ntBASIC2.1□□□□□ -2.07
ECHDC3Q96DC8 ZNF90P2-204ENST00000419323 1075 ntBASIC2.1□□□□□ -2.07
ECHDC3Q96DC8 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.1□□□□□ -2.07
ECHDC3Q96DC8 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.1□□□□□ -2.07
ECHDC3Q96DC8 HMGN2P10-201ENST00000448085 265 ntBASIC2.1□□□□□ -2.07
ECHDC3Q96DC8 AC055855.1-201ENST00000489563 579 ntBASIC2.1□□□□□ -2.07
ECHDC3Q96DC8 AC079804.2-201ENST00000490376 200 ntBASIC2.1□□□□□ -2.07
ECHDC3Q96DC8 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
ECHDC3Q96DC8 GZMAP1-201ENST00000503054 631 ntBASIC2.1□□□□□ -2.07
ECHDC3Q96DC8 RNU6-390P-201ENST00000516259 103 ntBASIC2.1□□□□□ -2.07
ECHDC3Q96DC8 SNORD19.2-201ENST00000516978 73 ntBASIC2.1□□□□□ -2.07
ECHDC3Q96DC8 RNA5SP165-201ENST00000517142 115 ntBASIC2.1□□□□□ -2.07
ECHDC3Q96DC8 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.1□□□□□ -2.07
ECHDC3Q96DC8 RPP40P2-201ENST00000603596 712 ntBASIC2.1□□□□□ -2.07
ECHDC3Q96DC8 BCRP9-201ENST00000605312 388 ntBASIC2.1□□□□□ -2.07
ECHDC3Q96DC8 RNU6-88P-201ENST00000606801 100 ntBASIC2.1□□□□□ -2.07
ECHDC3Q96DC8 AC007038.2-201ENST00000608095 740 ntBASIC2.1□□□□□ -2.07
ECHDC3Q96DC8 AC103710.1-201ENST00000610003 901 ntBASIC2.1□□□□□ -2.07
ECHDC3Q96DC8 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC2.1□□□□□ -2.07
ECHDC3Q96DC8 AC009269.6-201ENST00000621778 588 ntBASIC2.1□□□□□ -2.07
ECHDC3Q96DC8 AC112204.3-201ENST00000623822 332 ntBASIC2.1□□□□□ -2.07
ECHDC3Q96DC8 ZNF355P-201ENST00000427301 3216 ntBASIC2.1□□□□□ -2.07
ECHDC3Q96DC8 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
ECHDC3Q96DC8 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.09□□□□□ -2.07
ECHDC3Q96DC8 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.09□□□□□ -2.07
ECHDC3Q96DC8 RNU6-1242P-201ENST00000391052 103 ntBASIC2.09□□□□□ -2.07
ECHDC3Q96DC8 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.09□□□□□ -2.07
ECHDC3Q96DC8 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
ECHDC3Q96DC8 SNORD23.1-201ENST00000408212 104 ntBASIC2.09□□□□□ -2.07
ECHDC3Q96DC8 RNU2-2P-201ENST00000410396 191 ntBASIC2.09□□□□□ -2.07
ECHDC3Q96DC8 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.09□□□□□ -2.07
ECHDC3Q96DC8 AL109913.1-201ENST00000421173 514 ntBASIC2.09□□□□□ -2.07
ECHDC3Q96DC8 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC2.09□□□□□ -2.07
ECHDC3Q96DC8 AL445646.1-201ENST00000431784 216 ntBASIC2.09□□□□□ -2.07
ECHDC3Q96DC8 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.09□□□□□ -2.07
ECHDC3Q96DC8 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC2.09□□□□□ -2.07
ECHDC3Q96DC8 IPO7P1-201ENST00000442031 636 ntBASIC2.09□□□□□ -2.07
ECHDC3Q96DC8 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.09□□□□□ -2.07
ECHDC3Q96DC8 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
ECHDC3Q96DC8 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC2.09□□□□□ -2.07
ECHDC3Q96DC8 FCF1P6-201ENST00000456841 595 ntBASIC2.09□□□□□ -2.07
ECHDC3Q96DC8 AC072039.1-201ENST00000477611 581 ntBASIC2.09□□□□□ -2.07
ECHDC3Q96DC8 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC2.09□□□□□ -2.07
ECHDC3Q96DC8 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC2.09□□□□□ -2.07
ECHDC3Q96DC8 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2.09□□□□□ -2.07
ECHDC3Q96DC8 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.09□□□□□ -2.07
ECHDC3Q96DC8 IGKV3-31-201ENST00000523109 329 ntBASIC2.09□□□□□ -2.07
ECHDC3Q96DC8 AC010186.2-204ENST00000537668 439 ntBASIC2.09□□□□□ -2.07
ECHDC3Q96DC8 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC2.09□□□□□ -2.07
ECHDC3Q96DC8 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.09□□□□□ -2.07
ECHDC3Q96DC8 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC2.09□□□□□ -2.07
ECHDC3Q96DC8 MRPS36P5-201ENST00000551909 298 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 151.6 ms