Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 Y_RNA.238-201ENST00000364441 102 ntBASIC5.36□□□□□ -1.55
HLA-CQ95604 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.36□□□□□ -1.55
HLA-CQ95604 RNA5SP235-201ENST00000365411 114 ntBASIC5.36□□□□□ -1.55
HLA-CQ95604 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
HLA-CQ95604 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HLA-CQ95604 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HLA-CQ95604 IFNWP4-201ENST00000453148 294 ntBASIC5.36□□□□□ -1.55
HLA-CQ95604 ENPP7P9-201ENST00000514456 627 ntBASIC5.36□□□□□ -1.55
HLA-CQ95604 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.36□□□□□ -1.55
HLA-CQ95604 AP004371.1-201ENST00000525240 214 ntBASIC5.36□□□□□ -1.55
HLA-CQ95604 AP001880.2-201ENST00000538233 448 ntBASIC5.36□□□□□ -1.55
HLA-CQ95604 AC233702.2-202ENST00000562547 291 ntBASIC5.36□□□□□ -1.55
HLA-CQ95604 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC5.36□□□□□ -1.55
HLA-CQ95604 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC5.36□□□□□ -1.55
HLA-CQ95604 MIR6716-201ENST00000613413 80 ntBASIC5.36□□□□□ -1.55
HLA-CQ95604 AC110491.1-201ENST00000562191 2010 ntBASIC5.36□□□□□ -1.55
HLA-CQ95604 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.36□□□□□ -1.55
HLA-CQ95604 AC140134.1-201ENST00000511830 3544 ntBASIC5.36□□□□□ -1.55
HLA-CQ95604 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HLA-CQ95604 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HLA-CQ95604 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
HLA-CQ95604 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HLA-CQ95604 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HLA-CQ95604 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
HLA-CQ95604 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HLA-CQ95604 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC5.35□□□□□ -1.55
HLA-CQ95604 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.35□□□□□ -1.55
HLA-CQ95604 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HLA-CQ95604 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.35□□□□□ -1.55
HLA-CQ95604 SNORD32A-201ENST00000364805 84 ntBASIC5.35□□□□□ -1.55
HLA-CQ95604 HLFP1-201ENST00000402375 499 ntBASIC5.35□□□□□ -1.55
HLA-CQ95604 Y_RNA.595-201ENST00000410403 105 ntBASIC5.35□□□□□ -1.55
HLA-CQ95604 SNRPEP9-201ENST00000436794 238 ntBASIC5.35□□□□□ -1.55
HLA-CQ95604 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.35□□□□□ -1.55
HLA-CQ95604 AC010618.1-201ENST00000469924 477 ntBASIC5.35□□□□□ -1.55
HLA-CQ95604 KC877373.1-201ENST00000479066 408 ntBASIC5.35□□□□□ -1.55
HLA-CQ95604 AC093840.1-201ENST00000511599 336 ntBASIC5.35□□□□□ -1.55
HLA-CQ95604 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HLA-CQ95604 RNU6-191P-201ENST00000516295 94 ntBASIC5.35□□□□□ -1.55
HLA-CQ95604 RNA5SP54-201ENST00000516951 92 ntBASIC5.35□□□□□ -1.55
HLA-CQ95604 SUMO2P18-201ENST00000518873 252 ntBASIC5.35□□□□□ -1.55
HLA-CQ95604 MED28P6-201ENST00000558776 231 ntBASIC5.35□□□□□ -1.55
HLA-CQ95604 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
HLA-CQ95604 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HLA-CQ95604 snoU18.1-201ENST00000629629 71 ntBASIC5.35□□□□□ -1.55
HLA-CQ95604 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
HLA-CQ95604 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
HLA-CQ95604 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
HLA-CQ95604 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HLA-CQ95604 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
HLA-CQ95604 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.34□□□□□ -1.55
HLA-CQ95604 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HLA-CQ95604 AC100757.1-201ENST00000616872 1835 ntBASIC5.34□□□□□ -1.55
HLA-CQ95604 RNU1-64P-201ENST00000365443 163 ntBASIC5.34□□□□□ -1.55
HLA-CQ95604 RNU4-17P-201ENST00000365598 141 ntBASIC5.34□□□□□ -1.55
HLA-CQ95604 SNORD56.6-201ENST00000384569 71 ntBASIC5.34□□□□□ -1.55
HLA-CQ95604 RNU6-257P-201ENST00000410238 98 ntBASIC5.34□□□□□ -1.55
HLA-CQ95604 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
HLA-CQ95604 BX510359.2-201ENST00000417920 305 ntBASIC5.34□□□□□ -1.55
HLA-CQ95604 REREP1Y-201ENST00000422655 198 ntBASIC5.34□□□□□ -1.55
HLA-CQ95604 REREP2Y-201ENST00000439103 200 ntBASIC5.34□□□□□ -1.55
HLA-CQ95604 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC5.34□□□□□ -1.55
HLA-CQ95604 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HLA-CQ95604 HMGB3P3-201ENST00000510526 400 ntBASIC5.34□□□□□ -1.55
HLA-CQ95604 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC5.34□□□□□ -1.55
HLA-CQ95604 RNU6-426P-201ENST00000516464 97 ntBASIC5.34□□□□□ -1.55
HLA-CQ95604 SNORD116-25-201ENST00000516517 92 ntBASIC5.34□□□□□ -1.55
HLA-CQ95604 RNU6-919P-201ENST00000516731 104 ntBASIC5.34□□□□□ -1.55
HLA-CQ95604 RNU6-703P-201ENST00000516946 107 ntBASIC5.34□□□□□ -1.55
HLA-CQ95604 SNORA31.20-201ENST00000517111 133 ntBASIC5.34□□□□□ -1.55
HLA-CQ95604 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC5.34□□□□□ -1.55
HLA-CQ95604 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC5.34□□□□□ -1.55
HLA-CQ95604 AC007224.1-201ENST00000564410 144 ntBASIC5.34□□□□□ -1.55
HLA-CQ95604 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.34□□□□□ -1.55
HLA-CQ95604 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC5.34□□□□□ -1.55
HLA-CQ95604 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HLA-CQ95604 MESTIT1_1.1-201ENST00000618871 140 ntBASIC5.34□□□□□ -1.55
HLA-CQ95604 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.34□□□□□ -1.55
HLA-CQ95604 U6.99-201ENST00000637524 83 ntBASIC5.34□□□□□ -1.55
HLA-CQ95604 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
HLA-CQ95604 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.34□□□□□ -1.55
HLA-CQ95604 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HLA-CQ95604 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
HLA-CQ95604 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
HLA-CQ95604 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HLA-CQ95604 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.33□□□□□ -1.56
HLA-CQ95604 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
HLA-CQ95604 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
HLA-CQ95604 AC073073.2-201ENST00000609827 2578 ntBASIC5.33□□□□□ -1.56
HLA-CQ95604 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HLA-CQ95604 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HLA-CQ95604 AL359837.1-201ENST00000381357 287 ntBASIC5.33□□□□□ -1.56
HLA-CQ95604 Y_RNA.412-201ENST00000384001 104 ntBASIC5.33□□□□□ -1.56
HLA-CQ95604 SNORA37-201ENST00000384504 129 ntBASIC5.33□□□□□ -1.56
HLA-CQ95604 MIR569-201ENST00000385228 96 ntBASIC5.33□□□□□ -1.56
HLA-CQ95604 SNORA40-201ENST00000388090 126 ntBASIC5.33□□□□□ -1.56
HLA-CQ95604 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
HLA-CQ95604 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.33□□□□□ -1.56
HLA-CQ95604 RPL23AP1-201ENST00000428990 471 ntBASIC5.33□□□□□ -1.56
HLA-CQ95604 AL512844.2-201ENST00000433990 593 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms