Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 RPS4XP11-201ENST00000446897 772 ntBASIC1.87□□□□□ -2.11
SHROOM3Q8TF72 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC1.87□□□□□ -2.11
SHROOM3Q8TF72 AL137159.1-201ENST00000452808 512 ntBASIC1.87□□□□□ -2.11
SHROOM3Q8TF72 ATG12P2-201ENST00000456830 416 ntBASIC1.87□□□□□ -2.11
SHROOM3Q8TF72 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.87□□□□□ -2.11
SHROOM3Q8TF72 IGLV3-17-201ENST00000519099 244 ntBASIC1.87□□□□□ -2.11
SHROOM3Q8TF72 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC1.87□□□□□ -2.11
SHROOM3Q8TF72 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC1.87□□□□□ -2.11
SHROOM3Q8TF72 PCMTD1P2-201ENST00000565017 355 ntBASIC1.87□□□□□ -2.11
SHROOM3Q8TF72 MYL12BP1-201ENST00000569826 507 ntBASIC1.87□□□□□ -2.11
SHROOM3Q8TF72 AC104581.2-201ENST00000572227 430 ntBASIC1.87□□□□□ -2.11
SHROOM3Q8TF72 MIR3690-201ENST00000580266 75 ntBASIC1.87□□□□□ -2.11
SHROOM3Q8TF72 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC1.87□□□□□ -2.11
SHROOM3Q8TF72 AP001029.3-201ENST00000588063 596 ntBASIC1.87□□□□□ -2.11
SHROOM3Q8TF72 AC004853.1-201ENST00000604902 698 ntBASIC1.87□□□□□ -2.11
SHROOM3Q8TF72 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC1.87□□□□□ -2.11
SHROOM3Q8TF72 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.87□□□□□ -2.11
SHROOM3Q8TF72 AL158801.5-201ENST00000623123 465 ntBASIC1.87□□□□□ -2.11
SHROOM3Q8TF72 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC1.87□□□□□ -2.11
SHROOM3Q8TF72 ZNF876P-202ENST00000398732 1485 ntBASIC1.87□□□□□ -2.11
SHROOM3Q8TF72 PABPC1P9-201ENST00000426076 1612 ntBASIC1.87□□□□□ -2.11
SHROOM3Q8TF72 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
SHROOM3Q8TF72 AP000275.1-201ENST00000411943 390 ntBASIC1.87□□□□□ -2.11
SHROOM3Q8TF72 MTND2P18-201ENST00000419962 1030 ntBASIC1.87□□□□□ -2.11
SHROOM3Q8TF72 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC1.87□□□□□ -2.11
SHROOM3Q8TF72 BX119904.4-201ENST00000424402 301 ntBASIC1.87□□□□□ -2.11
SHROOM3Q8TF72 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC1.87□□□□□ -2.11
SHROOM3Q8TF72 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.87□□□□□ -2.11
SHROOM3Q8TF72 CETN4P-201ENST00000432407 469 ntBASIC1.87□□□□□ -2.11
SHROOM3Q8TF72 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.87□□□□□ -2.11
SHROOM3Q8TF72 AC002381.1-201ENST00000447049 280 ntBASIC1.87□□□□□ -2.11
SHROOM3Q8TF72 RPL23AP63-201ENST00000498752 471 ntBASIC1.87□□□□□ -2.11
SHROOM3Q8TF72 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC1.87□□□□□ -2.11
SHROOM3Q8TF72 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.87□□□□□ -2.11
SHROOM3Q8TF72 RNU6-1095P-201ENST00000516148 108 ntBASIC1.87□□□□□ -2.11
SHROOM3Q8TF72 RNA5SP364-201ENST00000516938 78 ntBASIC1.87□□□□□ -2.11
SHROOM3Q8TF72 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC1.87□□□□□ -2.11
SHROOM3Q8TF72 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC1.87□□□□□ -2.11
SHROOM3Q8TF72 AC121758.2-201ENST00000553271 193 ntBASIC1.87□□□□□ -2.11
SHROOM3Q8TF72 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC1.87□□□□□ -2.11
SHROOM3Q8TF72 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC1.87□□□□□ -2.11
SHROOM3Q8TF72 AC008751.2-201ENST00000597885 980 ntBASIC1.87□□□□□ -2.11
SHROOM3Q8TF72 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC1.87□□□□□ -2.11
SHROOM3Q8TF72 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC1.87□□□□□ -2.11
SHROOM3Q8TF72 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.86□□□□□ -2.11
SHROOM3Q8TF72 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC1.86□□□□□ -2.11
SHROOM3Q8TF72 RNA5SP258-201ENST00000362750 119 ntBASIC1.86□□□□□ -2.11
SHROOM3Q8TF72 Y_RNA.224-201ENST00000364308 111 ntBASIC1.86□□□□□ -2.11
SHROOM3Q8TF72 Y_RNA.560-201ENST00000384689 102 ntBASIC1.86□□□□□ -2.11
SHROOM3Q8TF72 RNU6-114P-201ENST00000384704 105 ntBASIC1.86□□□□□ -2.11
SHROOM3Q8TF72 MIR144-201ENST00000384886 86 ntBASIC1.86□□□□□ -2.11
SHROOM3Q8TF72 MIR607-201ENST00000385241 96 ntBASIC1.86□□□□□ -2.11
SHROOM3Q8TF72 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
SHROOM3Q8TF72 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC1.86□□□□□ -2.11
SHROOM3Q8TF72 AC079780.1-201ENST00000428259 207 ntBASIC1.86□□□□□ -2.11
SHROOM3Q8TF72 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1.86□□□□□ -2.11
SHROOM3Q8TF72 RPS25P9-201ENST00000435591 252 ntBASIC1.86□□□□□ -2.11
SHROOM3Q8TF72 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC1.86□□□□□ -2.11
SHROOM3Q8TF72 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.86□□□□□ -2.11
SHROOM3Q8TF72 ARPC3P5-201ENST00000448802 534 ntBASIC1.86□□□□□ -2.11
SHROOM3Q8TF72 TRGVB-201ENST00000453257 471 ntBASIC1.86□□□□□ -2.11
SHROOM3Q8TF72 AL139824.2-201ENST00000458731 1095 ntBASIC1.86□□□□□ -2.11
SHROOM3Q8TF72 RNU7-95P-201ENST00000459222 64 ntBASIC1.86□□□□□ -2.11
SHROOM3Q8TF72 RNU6-1129P-201ENST00000515964 104 ntBASIC1.86□□□□□ -2.11
SHROOM3Q8TF72 RNA5SP220-201ENST00000516298 104 ntBASIC1.86□□□□□ -2.11
SHROOM3Q8TF72 RNU6-714P-201ENST00000516963 103 ntBASIC1.86□□□□□ -2.11
SHROOM3Q8TF72 MTCO1P47-201ENST00000523889 1271 ntBASIC1.86□□□□□ -2.11
SHROOM3Q8TF72 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.86□□□□□ -2.11
SHROOM3Q8TF72 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC1.86□□□□□ -2.11
SHROOM3Q8TF72 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC1.86□□□□□ -2.11
SHROOM3Q8TF72 AC012435.1-202ENST00000568772 240 ntBASIC1.86□□□□□ -2.11
SHROOM3Q8TF72 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC1.86□□□□□ -2.11
SHROOM3Q8TF72 MIR5089-201ENST00000580047 84 ntBASIC1.86□□□□□ -2.11
SHROOM3Q8TF72 AC021171.1-201ENST00000603137 706 ntBASIC1.86□□□□□ -2.11
SHROOM3Q8TF72 AL596245.1-201ENST00000618994 362 ntBASIC1.86□□□□□ -2.11
SHROOM3Q8TF72 AP000676.3-201ENST00000623299 569 ntBASIC1.86□□□□□ -2.11
SHROOM3Q8TF72 AC097520.1-201ENST00000624435 385 ntBASIC1.86□□□□□ -2.11
SHROOM3Q8TF72 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC1.86□□□□□ -2.11
SHROOM3Q8TF72 AC007671.2-201ENST00000637344 619 ntBASIC1.86□□□□□ -2.11
SHROOM3Q8TF72 AC103706.2-201ENST00000638080 240 ntBASIC1.86□□□□□ -2.11
SHROOM3Q8TF72 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.86□□□□□ -2.11
SHROOM3Q8TF72 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
SHROOM3Q8TF72 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
SHROOM3Q8TF72 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
SHROOM3Q8TF72 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
SHROOM3Q8TF72 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
SHROOM3Q8TF72 HSPE1P11-201ENST00000339579 310 ntBASIC1.85□□□□□ -2.11
SHROOM3Q8TF72 RNU6-28P-201ENST00000362378 107 ntBASIC1.85□□□□□ -2.11
SHROOM3Q8TF72 RNU6-432P-201ENST00000384196 109 ntBASIC1.85□□□□□ -2.11
SHROOM3Q8TF72 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
SHROOM3Q8TF72 AL356131.1-201ENST00000405826 414 ntBASIC1.85□□□□□ -2.11
SHROOM3Q8TF72 RNA5SP489-201ENST00000410986 109 ntBASIC1.85□□□□□ -2.11
SHROOM3Q8TF72 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.85□□□□□ -2.11
SHROOM3Q8TF72 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.85□□□□□ -2.11
SHROOM3Q8TF72 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC1.85□□□□□ -2.11
SHROOM3Q8TF72 AL117351.1-201ENST00000438864 766 ntBASIC1.85□□□□□ -2.11
SHROOM3Q8TF72 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC1.85□□□□□ -2.11
SHROOM3Q8TF72 SNORD121B-201ENST00000458838 81 ntBASIC1.85□□□□□ -2.11
SHROOM3Q8TF72 MRPS33P3-201ENST00000513456 322 ntBASIC1.85□□□□□ -2.11
SHROOM3Q8TF72 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms