Protein–RNA interactions for Protein: Q8NCU8

LINC00116, Uncharacterized protein encoded by LINC00116, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116Q8NCU8 SCARNA15.3-201ENST00000626315 122 ntBASIC4.65□□□□□ -1.67
LINC00116Q8NCU8 SCARNA4.1-201ENST00000628597 123 ntBASIC4.65□□□□□ -1.67
LINC00116Q8NCU8 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.65□□□□□ -1.67
LINC00116Q8NCU8 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
LINC00116Q8NCU8 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.67
LINC00116Q8NCU8 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
LINC00116Q8NCU8 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.64□□□□□ -1.67
LINC00116Q8NCU8 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LINC00116Q8NCU8 RNU6-263P-201ENST00000363811 107 ntBASIC4.64□□□□□ -1.67
LINC00116Q8NCU8 SNORA38.1-201ENST00000364172 131 ntBASIC4.64□□□□□ -1.67
LINC00116Q8NCU8 MT-TR-201ENST00000387439 65 ntBASIC4.64□□□□□ -1.67
LINC00116Q8NCU8 RPS4XP7-201ENST00000406274 780 ntBASIC4.64□□□□□ -1.67
LINC00116Q8NCU8 RNA5SP56-201ENST00000410277 118 ntBASIC4.64□□□□□ -1.67
LINC00116Q8NCU8 RNU4-78P-201ENST00000410940 126 ntBASIC4.64□□□□□ -1.67
LINC00116Q8NCU8 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.64□□□□□ -1.67
LINC00116Q8NCU8 RPL7P37-201ENST00000425095 738 ntBASIC4.64□□□□□ -1.67
LINC00116Q8NCU8 HIGD1AP11-201ENST00000438361 280 ntBASIC4.64□□□□□ -1.67
LINC00116Q8NCU8 NEFMP1-201ENST00000443423 1006 ntBASIC4.64□□□□□ -1.67
LINC00116Q8NCU8 GSTA11P-201ENST00000452866 669 ntBASIC4.64□□□□□ -1.67
LINC00116Q8NCU8 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.64□□□□□ -1.67
LINC00116Q8NCU8 RPL23AP94-201ENST00000512518 302 ntBASIC4.64□□□□□ -1.67
LINC00116Q8NCU8 RNU6-470P-201ENST00000515954 104 ntBASIC4.64□□□□□ -1.67
LINC00116Q8NCU8 RNU6-699P-201ENST00000517081 110 ntBASIC4.64□□□□□ -1.67
LINC00116Q8NCU8 AP003385.6-201ENST00000531603 374 ntBASIC4.64□□□□□ -1.67
LINC00116Q8NCU8 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.64□□□□□ -1.67
LINC00116Q8NCU8 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC4.64□□□□□ -1.67
LINC00116Q8NCU8 AL669831.4-202ENST00000590817 238 ntBASIC4.64□□□□□ -1.67
LINC00116Q8NCU8 AL359547.2-201ENST00000615810 418 ntBASIC4.64□□□□□ -1.67
LINC00116Q8NCU8 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
LINC00116Q8NCU8 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.64□□□□□ -1.67
LINC00116Q8NCU8 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
LINC00116Q8NCU8 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.63□□□□□ -1.67
LINC00116Q8NCU8 SAGE2P-201ENST00000420011 2126 ntBASIC4.63□□□□□ -1.67
LINC00116Q8NCU8 AP001642.1-201ENST00000624727 2117 ntBASIC4.63□□□□□ -1.67
LINC00116Q8NCU8 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
LINC00116Q8NCU8 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.63□□□□□ -1.67
LINC00116Q8NCU8 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
LINC00116Q8NCU8 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
LINC00116Q8NCU8 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
LINC00116Q8NCU8 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
LINC00116Q8NCU8 Y_RNA.188-201ENST00000363952 111 ntBASIC4.63□□□□□ -1.67
LINC00116Q8NCU8 RNU6-190P-201ENST00000384154 102 ntBASIC4.63□□□□□ -1.67
LINC00116Q8NCU8 SNORA48.5-201ENST00000391143 135 ntBASIC4.63□□□□□ -1.67
LINC00116Q8NCU8 RN7SKP58-201ENST00000411010 305 ntBASIC4.63□□□□□ -1.67
LINC00116Q8NCU8 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.63□□□□□ -1.67
LINC00116Q8NCU8 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC4.63□□□□□ -1.67
LINC00116Q8NCU8 ELOCP18-201ENST00000434209 337 ntBASIC4.63□□□□□ -1.67
LINC00116Q8NCU8 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC4.63□□□□□ -1.67
LINC00116Q8NCU8 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC4.63□□□□□ -1.67
LINC00116Q8NCU8 AC021146.3-201ENST00000511911 260 ntBASIC4.63□□□□□ -1.67
LINC00116Q8NCU8 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.63□□□□□ -1.67
LINC00116Q8NCU8 RN7SKP289-201ENST00000517244 295 ntBASIC4.63□□□□□ -1.67
LINC00116Q8NCU8 AC026371.1-201ENST00000551867 419 ntBASIC4.63□□□□□ -1.67
LINC00116Q8NCU8 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC4.63□□□□□ -1.67
LINC00116Q8NCU8 AC011373.1-201ENST00000607270 237 ntBASIC4.63□□□□□ -1.67
LINC00116Q8NCU8 AC004696.1-201ENST00000614345 607 ntBASIC4.63□□□□□ -1.67
LINC00116Q8NCU8 MIR6852-201ENST00000621699 66 ntBASIC4.63□□□□□ -1.67
LINC00116Q8NCU8 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.63□□□□□ -1.67
LINC00116Q8NCU8 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
LINC00116Q8NCU8 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.63□□□□□ -1.67
LINC00116Q8NCU8 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
LINC00116Q8NCU8 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.62□□□□□ -1.67
LINC00116Q8NCU8 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
LINC00116Q8NCU8 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC4.62□□□□□ -1.67
LINC00116Q8NCU8 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
LINC00116Q8NCU8 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
LINC00116Q8NCU8 RNU6-490P-201ENST00000362985 107 ntBASIC4.62□□□□□ -1.67
LINC00116Q8NCU8 SNORA23-201ENST00000365128 182 ntBASIC4.62□□□□□ -1.67
LINC00116Q8NCU8 RNU6-26P-201ENST00000383985 107 ntBASIC4.62□□□□□ -1.67
LINC00116Q8NCU8 Y_RNA.455-201ENST00000384230 98 ntBASIC4.62□□□□□ -1.67
LINC00116Q8NCU8 MT-TG-201ENST00000387429 68 ntBASIC4.62□□□□□ -1.67
LINC00116Q8NCU8 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
LINC00116Q8NCU8 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.62□□□□□ -1.67
LINC00116Q8NCU8 AC092809.3-201ENST00000415453 231 ntBASIC4.62□□□□□ -1.67
LINC00116Q8NCU8 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.62□□□□□ -1.67
LINC00116Q8NCU8 AL137014.1-201ENST00000420490 1226 ntBASIC4.62□□□□□ -1.67
LINC00116Q8NCU8 AC008267.5-201ENST00000424928 265 ntBASIC4.62□□□□□ -1.67
LINC00116Q8NCU8 AL669831.1-202ENST00000428504 417 ntBASIC4.62□□□□□ -1.67
LINC00116Q8NCU8 MRPS18BP2-201ENST00000434310 759 ntBASIC4.62□□□□□ -1.67
LINC00116Q8NCU8 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC4.62□□□□□ -1.67
LINC00116Q8NCU8 RPL5P30-201ENST00000465511 891 ntBASIC4.62□□□□□ -1.67
LINC00116Q8NCU8 AC087884.1-201ENST00000469738 328 ntBASIC4.62□□□□□ -1.67
LINC00116Q8NCU8 AC026801.1-201ENST00000497178 464 ntBASIC4.62□□□□□ -1.67
LINC00116Q8NCU8 RNU6-1271P-201ENST00000517049 105 ntBASIC4.62□□□□□ -1.67
LINC00116Q8NCU8 AP006587.4-201ENST00000526053 529 ntBASIC4.62□□□□□ -1.67
LINC00116Q8NCU8 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.62□□□□□ -1.67
LINC00116Q8NCU8 AC174048.1-201ENST00000603389 144 ntBASIC4.62□□□□□ -1.67
LINC00116Q8NCU8 AC104763.2-201ENST00000604179 382 ntBASIC4.62□□□□□ -1.67
LINC00116Q8NCU8 MIR6130-201ENST00000619419 109 ntBASIC4.62□□□□□ -1.67
LINC00116Q8NCU8 MIR7154-201ENST00000620673 73 ntBASIC4.62□□□□□ -1.67
LINC00116Q8NCU8 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC4.62□□□□□ -1.67
LINC00116Q8NCU8 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
LINC00116Q8NCU8 LINC01109-201ENST00000603837 3081 ntBASIC4.62□□□□□ -1.67
LINC00116Q8NCU8 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC4.62□□□□□ -1.67
LINC00116Q8NCU8 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
LINC00116Q8NCU8 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
LINC00116Q8NCU8 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.62□□□□□ -1.67
LINC00116Q8NCU8 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.61□□□□□ -1.67
LINC00116Q8NCU8 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
LINC00116Q8NCU8 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms