Protein–RNA interactions for Protein: Q8N9I9

DTX3, Probable E3 ubiquitin-protein ligase DTX3, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DTX3Q8N9I9 AC091390.3-201ENST00000426478 338 ntBASIC3.94□□□□□ -1.78
DTX3Q8N9I9 USP9YP16-201ENST00000430287 407 ntBASIC3.94□□□□□ -1.78
DTX3Q8N9I9 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.94□□□□□ -1.78
DTX3Q8N9I9 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC3.94□□□□□ -1.78
DTX3Q8N9I9 OSTCP8-201ENST00000445117 448 ntBASIC3.94□□□□□ -1.78
DTX3Q8N9I9 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC3.94□□□□□ -1.78
DTX3Q8N9I9 USP9YP23-201ENST00000455085 407 ntBASIC3.94□□□□□ -1.78
DTX3Q8N9I9 BX284632.1-201ENST00000478218 541 ntBASIC3.94□□□□□ -1.78
DTX3Q8N9I9 RPS26P15-201ENST00000488067 348 ntBASIC3.94□□□□□ -1.78
DTX3Q8N9I9 RPL22P13-201ENST00000493291 347 ntBASIC3.94□□□□□ -1.78
DTX3Q8N9I9 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
DTX3Q8N9I9 Y_RNA.668-201ENST00000516233 93 ntBASIC3.94□□□□□ -1.78
DTX3Q8N9I9 RNU1-6P-201ENST00000516290 144 ntBASIC3.94□□□□□ -1.78
DTX3Q8N9I9 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.94□□□□□ -1.78
DTX3Q8N9I9 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.94□□□□□ -1.78
DTX3Q8N9I9 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.94□□□□□ -1.78
DTX3Q8N9I9 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.94□□□□□ -1.78
DTX3Q8N9I9 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.94□□□□□ -1.78
DTX3Q8N9I9 MIR3976-201ENST00000606807 139 ntBASIC3.94□□□□□ -1.78
DTX3Q8N9I9 FAM27B-201ENST00000610601 213 ntBASIC3.94□□□□□ -1.78
DTX3Q8N9I9 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.94□□□□□ -1.78
DTX3Q8N9I9 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
DTX3Q8N9I9 FP236240.3-201ENST00000623061 327 ntBASIC3.94□□□□□ -1.78
DTX3Q8N9I9 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
DTX3Q8N9I9 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
DTX3Q8N9I9 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.94□□□□□ -1.78
DTX3Q8N9I9 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.94□□□□□ -1.78
DTX3Q8N9I9 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
DTX3Q8N9I9 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
DTX3Q8N9I9 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.93□□□□□ -1.78
DTX3Q8N9I9 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC3.93□□□□□ -1.78
DTX3Q8N9I9 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
DTX3Q8N9I9 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
DTX3Q8N9I9 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
DTX3Q8N9I9 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
DTX3Q8N9I9 RNU4-42P-201ENST00000364738 142 ntBASIC3.93□□□□□ -1.78
DTX3Q8N9I9 RNA5SP22-201ENST00000365393 109 ntBASIC3.93□□□□□ -1.78
DTX3Q8N9I9 RNU6-713P-201ENST00000384761 107 ntBASIC3.93□□□□□ -1.78
DTX3Q8N9I9 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
DTX3Q8N9I9 RPS16P5-201ENST00000406501 404 ntBASIC3.93□□□□□ -1.78
DTX3Q8N9I9 RNA5SP113-201ENST00000410486 84 ntBASIC3.93□□□□□ -1.78
DTX3Q8N9I9 TEX41-205ENST00000431734 529 ntTSL 4 BASIC3.93□□□□□ -1.78
DTX3Q8N9I9 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC3.93□□□□□ -1.78
DTX3Q8N9I9 Z98949.2-201ENST00000440996 144 ntBASIC3.93□□□□□ -1.78
DTX3Q8N9I9 RPS24P13-201ENST00000442520 397 ntBASIC3.93□□□□□ -1.78
DTX3Q8N9I9 PCNPP5-201ENST00000452246 481 ntBASIC3.93□□□□□ -1.78
DTX3Q8N9I9 RNU6-1037P-201ENST00000459571 107 ntBASIC3.93□□□□□ -1.78
DTX3Q8N9I9 AC010285.1-201ENST00000470580 392 ntBASIC3.93□□□□□ -1.78
DTX3Q8N9I9 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC3.93□□□□□ -1.78
DTX3Q8N9I9 FO393415.2-201ENST00000480085 343 ntBASIC3.93□□□□□ -1.78
DTX3Q8N9I9 AC104564.1-201ENST00000493028 407 ntBASIC3.93□□□□□ -1.78
DTX3Q8N9I9 HMGN1P11-201ENST00000508668 303 ntBASIC3.93□□□□□ -1.78
DTX3Q8N9I9 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.93□□□□□ -1.78
DTX3Q8N9I9 SNORA40.14-201ENST00000516543 86 ntBASIC3.93□□□□□ -1.78
DTX3Q8N9I9 RNU7-4P-201ENST00000516961 62 ntBASIC3.93□□□□□ -1.78
DTX3Q8N9I9 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.93□□□□□ -1.78
DTX3Q8N9I9 AC084851.1-201ENST00000529105 249 ntBASIC3.93□□□□□ -1.78
DTX3Q8N9I9 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC3.93□□□□□ -1.78
DTX3Q8N9I9 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.93□□□□□ -1.78
DTX3Q8N9I9 MIR5188-201ENST00000583467 113 ntBASIC3.93□□□□□ -1.78
DTX3Q8N9I9 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC3.93□□□□□ -1.78
DTX3Q8N9I9 AC062037.2-201ENST00000610137 73 ntBASIC3.93□□□□□ -1.78
DTX3Q8N9I9 MIR6798-201ENST00000612887 67 ntBASIC3.93□□□□□ -1.78
DTX3Q8N9I9 AC107871.2-201ENST00000612894 502 ntBASIC3.93□□□□□ -1.78
DTX3Q8N9I9 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
DTX3Q8N9I9 AC091953.3-201ENST00000623220 236 ntBASIC3.93□□□□□ -1.78
DTX3Q8N9I9 ZNF72P-201ENST00000425869 1908 ntBASIC3.93□□□□□ -1.78
DTX3Q8N9I9 NCAPGP1-201ENST00000505112 1814 ntBASIC3.93□□□□□ -1.78
DTX3Q8N9I9 SAMMSON-226ENST00000642089 1582 ntBASIC3.93□□□□□ -1.78
DTX3Q8N9I9 AC025031.4-201ENST00000621248 3271 ntBASIC3.92□□□□□ -1.78
DTX3Q8N9I9 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
DTX3Q8N9I9 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
DTX3Q8N9I9 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.92□□□□□ -1.78
DTX3Q8N9I9 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
DTX3Q8N9I9 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
DTX3Q8N9I9 MIR412-201ENST00000362142 91 ntBASIC3.92□□□□□ -1.78
DTX3Q8N9I9 RNU6-335P-201ENST00000364563 113 ntBASIC3.92□□□□□ -1.78
DTX3Q8N9I9 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
DTX3Q8N9I9 Z98745.1-201ENST00000402553 494 ntBASIC3.92□□□□□ -1.78
DTX3Q8N9I9 Z98941.1-201ENST00000407764 100 ntBASIC3.92□□□□□ -1.78
DTX3Q8N9I9 RPL23AP25-201ENST00000430973 463 ntBASIC3.92□□□□□ -1.78
DTX3Q8N9I9 RPS15AP10-201ENST00000432472 382 ntBASIC3.92□□□□□ -1.78
DTX3Q8N9I9 RPL21P2-201ENST00000440049 481 ntBASIC3.92□□□□□ -1.78
DTX3Q8N9I9 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.92□□□□□ -1.78
DTX3Q8N9I9 CHEK2P4-201ENST00000450340 246 ntBASIC3.92□□□□□ -1.78
DTX3Q8N9I9 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC3.92□□□□□ -1.78
DTX3Q8N9I9 HMGN2P13-201ENST00000476476 274 ntBASIC3.92□□□□□ -1.78
DTX3Q8N9I9 AC008897.1-201ENST00000494006 347 ntBASIC3.92□□□□□ -1.78
DTX3Q8N9I9 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC3.92□□□□□ -1.78
DTX3Q8N9I9 SCARNA15.2-201ENST00000516409 127 ntBASIC3.92□□□□□ -1.78
DTX3Q8N9I9 Y_RNA.687-201ENST00000516558 91 ntBASIC3.92□□□□□ -1.78
DTX3Q8N9I9 Y_RNA.715-201ENST00000517082 110 ntBASIC3.92□□□□□ -1.78
DTX3Q8N9I9 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.92□□□□□ -1.78
DTX3Q8N9I9 IFITM8P-201ENST00000522529 394 ntBASIC3.92□□□□□ -1.78
DTX3Q8N9I9 AP000827.1-201ENST00000527814 258 ntBASIC3.92□□□□□ -1.78
DTX3Q8N9I9 AC040926.1-201ENST00000530195 238 ntBASIC3.92□□□□□ -1.78
DTX3Q8N9I9 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.92□□□□□ -1.78
DTX3Q8N9I9 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.92□□□□□ -1.78
DTX3Q8N9I9 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.92□□□□□ -1.78
DTX3Q8N9I9 HMGB2P1-201ENST00000591146 634 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms