Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
VARS2Q5ST30 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
VARS2Q5ST30 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
VARS2Q5ST30 RPL23P2-201ENST00000320371 421 ntBASIC5.81□□□□□ -1.48
VARS2Q5ST30 RNU6-324P-201ENST00000363957 106 ntBASIC5.81□□□□□ -1.48
VARS2Q5ST30 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
VARS2Q5ST30 RPL21P17-201ENST00000397467 475 ntBASIC5.81□□□□□ -1.48
VARS2Q5ST30 AC016397.1-201ENST00000412463 242 ntBASIC5.81□□□□□ -1.48
VARS2Q5ST30 AC016712.1-201ENST00000431088 378 ntBASIC5.81□□□□□ -1.48
VARS2Q5ST30 AC112220.1-201ENST00000434628 355 ntBASIC5.81□□□□□ -1.48
VARS2Q5ST30 RPS11P7-201ENST00000442125 465 ntBASIC5.81□□□□□ -1.48
VARS2Q5ST30 RPS29P22-201ENST00000472363 168 ntBASIC5.81□□□□□ -1.48
VARS2Q5ST30 AC007686.1-201ENST00000488511 463 ntBASIC5.81□□□□□ -1.48
VARS2Q5ST30 AC091868.1-201ENST00000508746 304 ntBASIC5.81□□□□□ -1.48
VARS2Q5ST30 RNU6-941P-201ENST00000516346 108 ntBASIC5.81□□□□□ -1.48
VARS2Q5ST30 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC5.81□□□□□ -1.48
VARS2Q5ST30 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.81□□□□□ -1.48
VARS2Q5ST30 AC007012.1-201ENST00000567192 175 ntBASIC5.81□□□□□ -1.48
VARS2Q5ST30 MIR378D2-201ENST00000580636 98 ntBASIC5.81□□□□□ -1.48
VARS2Q5ST30 MIR4697-201ENST00000582977 78 ntBASIC5.81□□□□□ -1.48
VARS2Q5ST30 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.81□□□□□ -1.48
VARS2Q5ST30 AC126915.2-201ENST00000610957 190 ntBASIC5.81□□□□□ -1.48
VARS2Q5ST30 AL590808.1-201ENST00000618696 141 ntBASIC5.81□□□□□ -1.48
VARS2Q5ST30 MIR3674-201ENST00000636576 68 ntBASIC5.81□□□□□ -1.48
VARS2Q5ST30 AL359955.1-201ENST00000455242 3275 ntBASIC5.81□□□□□ -1.48
VARS2Q5ST30 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
VARS2Q5ST30 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
VARS2Q5ST30 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.81□□□□□ -1.48
VARS2Q5ST30 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
VARS2Q5ST30 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC5.81□□□□□ -1.48
VARS2Q5ST30 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
VARS2Q5ST30 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
VARS2Q5ST30 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
VARS2Q5ST30 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.8□□□□□ -1.48
VARS2Q5ST30 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
VARS2Q5ST30 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.8□□□□□ -1.48
VARS2Q5ST30 RNU6-1167P-201ENST00000363227 94 ntBASIC5.8□□□□□ -1.48
VARS2Q5ST30 RNU5F-3P-201ENST00000363767 117 ntBASIC5.8□□□□□ -1.48
VARS2Q5ST30 SNORA67-201ENST00000384423 137 ntBASIC5.8□□□□□ -1.48
VARS2Q5ST30 ENSAP1-201ENST00000392855 326 ntBASIC5.8□□□□□ -1.48
VARS2Q5ST30 RNA5SP44-201ENST00000410446 133 ntBASIC5.8□□□□□ -1.48
VARS2Q5ST30 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC5.8□□□□□ -1.48
VARS2Q5ST30 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC5.8□□□□□ -1.48
VARS2Q5ST30 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.8□□□□□ -1.48
VARS2Q5ST30 AC139453.3-201ENST00000493276 369 ntBASIC5.8□□□□□ -1.48
VARS2Q5ST30 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.8□□□□□ -1.48
VARS2Q5ST30 Y_RNA.690-201ENST00000516603 95 ntBASIC5.8□□□□□ -1.48
VARS2Q5ST30 RNU2-12P-201ENST00000517216 168 ntBASIC5.8□□□□□ -1.48
VARS2Q5ST30 AC122688.1-201ENST00000541494 223 ntBASIC5.8□□□□□ -1.48
VARS2Q5ST30 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC5.8□□□□□ -1.48
VARS2Q5ST30 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.8□□□□□ -1.48
VARS2Q5ST30 RPL10P14-201ENST00000565265 298 ntBASIC5.8□□□□□ -1.48
VARS2Q5ST30 SNORD115-40-201ENST00000606510 82 ntBASIC5.8□□□□□ -1.48
VARS2Q5ST30 MALAT1.1-201ENST00000618249 95 ntBASIC5.8□□□□□ -1.48
VARS2Q5ST30 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.8□□□□□ -1.48
VARS2Q5ST30 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
VARS2Q5ST30 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
VARS2Q5ST30 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
VARS2Q5ST30 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
VARS2Q5ST30 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.8□□□□□ -1.48
VARS2Q5ST30 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
VARS2Q5ST30 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.8□□□□□ -1.48
VARS2Q5ST30 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
VARS2Q5ST30 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
VARS2Q5ST30 AP005435.3-201ENST00000531260 3198 ntBASIC5.79□□□□□ -1.48
VARS2Q5ST30 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.79□□□□□ -1.48
VARS2Q5ST30 AC009962.1-201ENST00000567327 3813 ntBASIC5.79□□□□□ -1.48
VARS2Q5ST30 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
VARS2Q5ST30 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
VARS2Q5ST30 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.79□□□□□ -1.48
VARS2Q5ST30 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
VARS2Q5ST30 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC5.79□□□□□ -1.48
VARS2Q5ST30 RNU6-1205P-201ENST00000363625 106 ntBASIC5.79□□□□□ -1.48
VARS2Q5ST30 RNU6-1014P-201ENST00000383940 103 ntBASIC5.79□□□□□ -1.48
VARS2Q5ST30 RNU6-136P-201ENST00000384663 107 ntBASIC5.79□□□□□ -1.48
VARS2Q5ST30 AL513331.1-201ENST00000411908 397 ntBASIC5.79□□□□□ -1.48
VARS2Q5ST30 AC096649.2-201ENST00000416186 393 ntBASIC5.79□□□□□ -1.48
VARS2Q5ST30 AC074117.2-201ENST00000417130 397 ntBASIC5.79□□□□□ -1.48
VARS2Q5ST30 RPL17P36-201ENST00000420302 549 ntBASIC5.79□□□□□ -1.48
VARS2Q5ST30 PSMD10P3-201ENST00000437000 448 ntBASIC5.79□□□□□ -1.48
VARS2Q5ST30 RNU6-158P-201ENST00000517104 100 ntBASIC5.79□□□□□ -1.48
VARS2Q5ST30 RNA5SP490-201ENST00000517141 136 ntBASIC5.79□□□□□ -1.48
VARS2Q5ST30 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.79□□□□□ -1.48
VARS2Q5ST30 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.79□□□□□ -1.48
VARS2Q5ST30 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.79□□□□□ -1.48
VARS2Q5ST30 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
VARS2Q5ST30 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
VARS2Q5ST30 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
VARS2Q5ST30 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
VARS2Q5ST30 AC116096.1-201ENST00000566804 2314 ntBASIC5.79□□□□□ -1.48
VARS2Q5ST30 AC104964.3-201ENST00000606115 2860 ntBASIC5.78□□□□□ -1.48
VARS2Q5ST30 AC010266.2-201ENST00000564741 3255 ntBASIC5.78□□□□□ -1.48
VARS2Q5ST30 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.78□□□□□ -1.48
VARS2Q5ST30 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
VARS2Q5ST30 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.78□□□□□ -1.48
VARS2Q5ST30 RNA5SP125-201ENST00000364843 120 ntBASIC5.78□□□□□ -1.48
VARS2Q5ST30 RNU6-1134P-201ENST00000365156 101 ntBASIC5.78□□□□□ -1.48
VARS2Q5ST30 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.78□□□□□ -1.48
VARS2Q5ST30 RN7SKP53-201ENST00000411337 315 ntBASIC5.78□□□□□ -1.48
VARS2Q5ST30 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms