Protein–RNA interactions for Protein: Q5SRE5

NUP188, Nucleoporin NUP188 homolog, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188Q5SRE5 AC133485.1-201ENST00000567176 124 ntBASIC1.07□□□□□ -2.24
NUP188Q5SRE5 AC138907.6-201ENST00000568401 126 ntBASIC1.07□□□□□ -2.24
NUP188Q5SRE5 AC005786.1-201ENST00000588553 154 ntBASIC1.07□□□□□ -2.24
NUP188Q5SRE5 AC009229.3-201ENST00000608056 282 ntBASIC1.07□□□□□ -2.24
NUP188Q5SRE5 AC007038.2-201ENST00000608095 740 ntBASIC1.07□□□□□ -2.24
NUP188Q5SRE5 AC103710.4-201ENST00000609301 899 ntBASIC1.07□□□□□ -2.24
NUP188Q5SRE5 AC027309.3-201ENST00000623419 351 ntBASIC1.07□□□□□ -2.24
NUP188Q5SRE5 MTND4P12-201ENST00000498999 1377 ntBASIC1.07□□□□□ -2.24
NUP188Q5SRE5 ZBTB8OSP1-201ENST00000342688 498 ntBASIC1.06□□□□□ -2.24
NUP188Q5SRE5 RNU6-1243P-201ENST00000364028 107 ntBASIC1.06□□□□□ -2.24
NUP188Q5SRE5 RNU6-19P-201ENST00000384718 107 ntBASIC1.06□□□□□ -2.24
NUP188Q5SRE5 AL356131.1-201ENST00000405826 414 ntBASIC1.06□□□□□ -2.24
NUP188Q5SRE5 RN7SKP158-201ENST00000410453 326 ntBASIC1.06□□□□□ -2.24
NUP188Q5SRE5 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.06□□□□□ -2.24
NUP188Q5SRE5 AC099677.1-201ENST00000420575 175 ntBASIC1.06□□□□□ -2.24
NUP188Q5SRE5 MTATP6P7-201ENST00000453315 681 ntBASIC1.06□□□□□ -2.24
NUP188Q5SRE5 AL359385.1-201ENST00000456509 365 ntBASIC1.06□□□□□ -2.24
NUP188Q5SRE5 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.06□□□□□ -2.24
NUP188Q5SRE5 RNU11-2P-201ENST00000516898 142 ntBASIC1.06□□□□□ -2.24
NUP188Q5SRE5 AP005902.1-201ENST00000521358 186 ntBASIC1.06□□□□□ -2.24
NUP188Q5SRE5 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC1.06□□□□□ -2.24
NUP188Q5SRE5 MED28P6-201ENST00000558776 231 ntBASIC1.06□□□□□ -2.24
NUP188Q5SRE5 AC025165.5-201ENST00000602802 578 ntBASIC1.06□□□□□ -2.24
NUP188Q5SRE5 MTCO2P22-201ENST00000603246 681 ntBASIC1.06□□□□□ -2.24
NUP188Q5SRE5 SNORD114-2-201ENST00000363953 78 ntBASIC1.06□□□□□ -2.24
NUP188Q5SRE5 RNU6-16P-201ENST00000384385 107 ntBASIC1.06□□□□□ -2.24
NUP188Q5SRE5 U8.14-201ENST00000390843 143 ntBASIC1.06□□□□□ -2.24
NUP188Q5SRE5 U3.29-201ENST00000391296 212 ntBASIC1.06□□□□□ -2.24
NUP188Q5SRE5 MIR934-201ENST00000401241 83 ntBASIC1.06□□□□□ -2.24
NUP188Q5SRE5 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC1.06□□□□□ -2.24
NUP188Q5SRE5 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC1.06□□□□□ -2.24
NUP188Q5SRE5 SEPT2P1-201ENST00000419651 180 ntBASIC1.06□□□□□ -2.24
NUP188Q5SRE5 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC1.06□□□□□ -2.24
NUP188Q5SRE5 AL353689.1-201ENST00000438895 199 ntBASIC1.06□□□□□ -2.24
NUP188Q5SRE5 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC1.06□□□□□ -2.24
NUP188Q5SRE5 RPS20P20-201ENST00000460498 340 ntBASIC1.06□□□□□ -2.24
NUP188Q5SRE5 RNF138P1-201ENST00000502765 546 ntBASIC1.06□□□□□ -2.24
NUP188Q5SRE5 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC1.06□□□□□ -2.24
NUP188Q5SRE5 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
NUP188Q5SRE5 RNU6-970P-201ENST00000516312 107 ntBASIC1.06□□□□□ -2.24
NUP188Q5SRE5 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC1.06□□□□□ -2.24
NUP188Q5SRE5 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC1.06□□□□□ -2.24
NUP188Q5SRE5 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC1.06□□□□□ -2.24
NUP188Q5SRE5 AC135507.1-201ENST00000607214 561 ntBASIC1.06□□□□□ -2.24
NUP188Q5SRE5 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC1.06□□□□□ -2.24
NUP188Q5SRE5 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.06□□□□□ -2.24
NUP188Q5SRE5 AC123912.3-201ENST00000600907 1367 ntBASIC1.06□□□□□ -2.24
NUP188Q5SRE5 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC1.05□□□□□ -2.24
NUP188Q5SRE5 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC1.05□□□□□ -2.24
NUP188Q5SRE5 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC1.05□□□□□ -2.24
NUP188Q5SRE5 MIR126-201ENST00000362291 85 ntBASIC1.05□□□□□ -2.24
NUP188Q5SRE5 MIR493-201ENST00000385254 89 ntBASIC1.05□□□□□ -2.24
NUP188Q5SRE5 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC1.05□□□□□ -2.24
NUP188Q5SRE5 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC1.05□□□□□ -2.24
NUP188Q5SRE5 ZNF965P-201ENST00000432501 817 ntBASIC1.05□□□□□ -2.24
NUP188Q5SRE5 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC1.05□□□□□ -2.24
NUP188Q5SRE5 AC104689.1-201ENST00000473356 768 ntBASIC1.05□□□□□ -2.24
NUP188Q5SRE5 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC1.05□□□□□ -2.24
NUP188Q5SRE5 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC1.05□□□□□ -2.24
NUP188Q5SRE5 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC1.05□□□□□ -2.24
NUP188Q5SRE5 CYCSP2-201ENST00000558168 301 ntBASIC1.05□□□□□ -2.24
NUP188Q5SRE5 AC005034.5-201ENST00000604219 466 ntBASIC1.05□□□□□ -2.24
NUP188Q5SRE5 AC090517.3-201ENST00000625170 141 ntBASIC1.05□□□□□ -2.24
NUP188Q5SRE5 SDAD1P2-201ENST00000441308 2028 ntBASIC1.05□□□□□ -2.24
NUP188Q5SRE5 AC016716.1-201ENST00000265882 708 ntBASIC1.04□□□□□ -2.24
NUP188Q5SRE5 RNU4-31P-201ENST00000384211 141 ntBASIC1.04□□□□□ -2.24
NUP188Q5SRE5 MIR147B-201ENST00000390185 80 ntBASIC1.04□□□□□ -2.24
NUP188Q5SRE5 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.04□□□□□ -2.24
NUP188Q5SRE5 AL022238.1-201ENST00000442557 355 ntBASIC1.04□□□□□ -2.24
NUP188Q5SRE5 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC1.04□□□□□ -2.24
NUP188Q5SRE5 RNU6-1308P-201ENST00000516817 103 ntBASIC1.04□□□□□ -2.24
NUP188Q5SRE5 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.04□□□□□ -2.24
NUP188Q5SRE5 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.04□□□□□ -2.24
NUP188Q5SRE5 FAM60BP-201ENST00000578364 658 ntBASIC1.04□□□□□ -2.24
NUP188Q5SRE5 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC1.04□□□□□ -2.24
NUP188Q5SRE5 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC1.04□□□□□ -2.24
NUP188Q5SRE5 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC1.04□□□□□ -2.24
NUP188Q5SRE5 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.04□□□□□ -2.24
NUP188Q5SRE5 OR4G3P-201ENST00000633500 913 ntBASIC1.04□□□□□ -2.24
NUP188Q5SRE5 SUCLA2P2-201ENST00000417269 1309 ntBASIC1.04□□□□□ -2.24
NUP188Q5SRE5 RNA5SP258-201ENST00000362750 119 ntBASIC1.03□□□□□ -2.24
NUP188Q5SRE5 RNU6-1235P-201ENST00000384559 107 ntBASIC1.03□□□□□ -2.24
NUP188Q5SRE5 AC098934.3-201ENST00000430450 190 ntBASIC1.03□□□□□ -2.24
NUP188Q5SRE5 RNU6-420P-201ENST00000458780 107 ntBASIC1.03□□□□□ -2.24
NUP188Q5SRE5 RNU6-498P-201ENST00000459468 107 ntBASIC1.03□□□□□ -2.24
NUP188Q5SRE5 AC087588.1-201ENST00000462203 316 ntBASIC1.03□□□□□ -2.24
NUP188Q5SRE5 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.03□□□□□ -2.24
NUP188Q5SRE5 CBX3P3-201ENST00000508108 532 ntBASIC1.03□□□□□ -2.24
NUP188Q5SRE5 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
NUP188Q5SRE5 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC1.03□□□□□ -2.24
NUP188Q5SRE5 RNU7-193P-201ENST00000516723 65 ntBASIC1.03□□□□□ -2.24
NUP188Q5SRE5 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC1.03□□□□□ -2.24
NUP188Q5SRE5 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC1.03□□□□□ -2.24
NUP188Q5SRE5 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC1.03□□□□□ -2.24
NUP188Q5SRE5 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC1.03□□□□□ -2.24
NUP188Q5SRE5 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC1.03□□□□□ -2.24
NUP188Q5SRE5 UBE2FP1-201ENST00000416536 447 ntBASIC1.03□□□□□ -2.24
NUP188Q5SRE5 EIF4EP4-201ENST00000424916 578 ntBASIC1.03□□□□□ -2.24
NUP188Q5SRE5 AC098614.2-201ENST00000426040 255 ntBASIC1.03□□□□□ -2.24
NUP188Q5SRE5 TPTE2P6-202ENST00000445572 1007 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms