Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SLC44A4Q53GD3 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SLC44A4Q53GD3 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.85□□□□□ -1.79
SLC44A4Q53GD3 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.85□□□□□ -1.79
SLC44A4Q53GD3 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SLC44A4Q53GD3 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
SLC44A4Q53GD3 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.85□□□□□ -1.79
SLC44A4Q53GD3 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.85□□□□□ -1.79
SLC44A4Q53GD3 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
SLC44A4Q53GD3 Y_RNA.162-201ENST00000363683 102 ntBASIC3.85□□□□□ -1.79
SLC44A4Q53GD3 RNU6-1227P-201ENST00000383981 107 ntBASIC3.85□□□□□ -1.79
SLC44A4Q53GD3 RNU6-190P-201ENST00000384154 102 ntBASIC3.85□□□□□ -1.79
SLC44A4Q53GD3 RNU6-692P-201ENST00000384496 107 ntBASIC3.85□□□□□ -1.79
SLC44A4Q53GD3 BTF3L4P3-201ENST00000418879 476 ntBASIC3.85□□□□□ -1.79
SLC44A4Q53GD3 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC3.85□□□□□ -1.79
SLC44A4Q53GD3 AF228730.4-201ENST00000421457 183 ntBASIC3.85□□□□□ -1.79
SLC44A4Q53GD3 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.85□□□□□ -1.79
SLC44A4Q53GD3 AC005534.2-201ENST00000431047 433 ntBASIC3.85□□□□□ -1.79
SLC44A4Q53GD3 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.85□□□□□ -1.79
SLC44A4Q53GD3 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC3.85□□□□□ -1.79
SLC44A4Q53GD3 RN7SL601P-201ENST00000471221 293 ntBASIC3.85□□□□□ -1.79
SLC44A4Q53GD3 RPL7P5-201ENST00000471472 736 ntBASIC3.85□□□□□ -1.79
SLC44A4Q53GD3 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SLC44A4Q53GD3 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.85□□□□□ -1.79
SLC44A4Q53GD3 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.85□□□□□ -1.79
SLC44A4Q53GD3 AL359273.1-201ENST00000510918 627 ntBASIC3.85□□□□□ -1.79
SLC44A4Q53GD3 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.85□□□□□ -1.79
SLC44A4Q53GD3 RNU6-277P-201ENST00000516272 106 ntBASIC3.85□□□□□ -1.79
SLC44A4Q53GD3 SNORD60.2-201ENST00000516883 86 ntBASIC3.85□□□□□ -1.79
SLC44A4Q53GD3 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC3.85□□□□□ -1.79
SLC44A4Q53GD3 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.85□□□□□ -1.79
SLC44A4Q53GD3 AC008521.1-201ENST00000587471 187 ntBASIC3.85□□□□□ -1.79
SLC44A4Q53GD3 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.85□□□□□ -1.79
SLC44A4Q53GD3 AP002826.1-201ENST00000608835 315 ntBASIC3.85□□□□□ -1.79
SLC44A4Q53GD3 AC090132.2-201ENST00000615881 347 ntBASIC3.85□□□□□ -1.79
SLC44A4Q53GD3 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.85□□□□□ -1.79
SLC44A4Q53GD3 MIR1302-1-201ENST00000637932 143 ntBASIC3.85□□□□□ -1.79
SLC44A4Q53GD3 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
SLC44A4Q53GD3 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SLC44A4Q53GD3 SDAD1P2-201ENST00000441308 2028 ntBASIC3.85□□□□□ -1.79
SLC44A4Q53GD3 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.85□□□□□ -1.79
SLC44A4Q53GD3 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SLC44A4Q53GD3 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SLC44A4Q53GD3 RNU4-20P-201ENST00000365601 151 ntBASIC3.84□□□□□ -1.79
SLC44A4Q53GD3 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
SLC44A4Q53GD3 AL590004.1-201ENST00000405321 300 ntBASIC3.84□□□□□ -1.79
SLC44A4Q53GD3 RN7SKP32-201ENST00000410167 303 ntBASIC3.84□□□□□ -1.79
SLC44A4Q53GD3 AL513331.1-201ENST00000411908 397 ntBASIC3.84□□□□□ -1.79
SLC44A4Q53GD3 USP9YP20-201ENST00000419224 558 ntBASIC3.84□□□□□ -1.79
SLC44A4Q53GD3 BX842559.1-201ENST00000419615 532 ntBASIC3.84□□□□□ -1.79
SLC44A4Q53GD3 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.84□□□□□ -1.79
SLC44A4Q53GD3 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.84□□□□□ -1.79
SLC44A4Q53GD3 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.84□□□□□ -1.79
SLC44A4Q53GD3 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.84□□□□□ -1.79
SLC44A4Q53GD3 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.84□□□□□ -1.79
SLC44A4Q53GD3 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.84□□□□□ -1.79
SLC44A4Q53GD3 VN1R17P-201ENST00000472048 1090 ntBASIC3.84□□□□□ -1.79
SLC44A4Q53GD3 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.84□□□□□ -1.79
SLC44A4Q53GD3 TTC39CP1-201ENST00000512513 755 ntBASIC3.84□□□□□ -1.79
SLC44A4Q53GD3 SNORA31.3-201ENST00000516029 96 ntBASIC3.84□□□□□ -1.79
SLC44A4Q53GD3 RNA5SP471-201ENST00000516971 106 ntBASIC3.84□□□□□ -1.79
SLC44A4Q53GD3 AP003072.1-201ENST00000531740 145 ntBASIC3.84□□□□□ -1.79
SLC44A4Q53GD3 AC004024.1-201ENST00000549244 247 ntBASIC3.84□□□□□ -1.79
SLC44A4Q53GD3 AL442663.2-201ENST00000554385 511 ntBASIC3.84□□□□□ -1.79
SLC44A4Q53GD3 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC3.84□□□□□ -1.79
SLC44A4Q53GD3 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.84□□□□□ -1.79
SLC44A4Q53GD3 AC002545.1-201ENST00000592511 181 ntBASIC3.84□□□□□ -1.79
SLC44A4Q53GD3 AL133255.1-201ENST00000606374 441 ntBASIC3.84□□□□□ -1.79
SLC44A4Q53GD3 AL365204.3-201ENST00000612448 685 ntBASIC3.84□□□□□ -1.79
SLC44A4Q53GD3 AL591424.2-201ENST00000617023 128 ntBASIC3.84□□□□□ -1.79
SLC44A4Q53GD3 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.84□□□□□ -1.79
SLC44A4Q53GD3 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC3.84□□□□□ -1.79
SLC44A4Q53GD3 TPTEP1-208ENST00000636884 213 ntBASIC3.84□□□□□ -1.79
SLC44A4Q53GD3 MTND4P35-201ENST00000604257 1375 ntBASIC3.84□□□□□ -1.79
SLC44A4Q53GD3 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
SLC44A4Q53GD3 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
SLC44A4Q53GD3 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
SLC44A4Q53GD3 OR4G1P-203ENST00000641984 1631 ntBASIC3.84□□□□□ -1.8
SLC44A4Q53GD3 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
SLC44A4Q53GD3 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
SLC44A4Q53GD3 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
SLC44A4Q53GD3 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SLC44A4Q53GD3 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SLC44A4Q53GD3 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SLC44A4Q53GD3 AL137003.2-201ENST00000606924 2538 ntBASIC3.83□□□□□ -1.8
SLC44A4Q53GD3 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.83□□□□□ -1.8
SLC44A4Q53GD3 RNU6-1287P-201ENST00000362914 107 ntBASIC3.83□□□□□ -1.8
SLC44A4Q53GD3 Y_RNA.326-201ENST00000365176 113 ntBASIC3.83□□□□□ -1.8
SLC44A4Q53GD3 RNU6-1060P-201ENST00000384664 107 ntBASIC3.83□□□□□ -1.8
SLC44A4Q53GD3 MIR493-201ENST00000385254 89 ntBASIC3.83□□□□□ -1.8
SLC44A4Q53GD3 SNORA48.2-201ENST00000390926 124 ntBASIC3.83□□□□□ -1.8
SLC44A4Q53GD3 RNU6-550P-201ENST00000391057 101 ntBASIC3.83□□□□□ -1.8
SLC44A4Q53GD3 CISD1P1-201ENST00000393907 327 ntBASIC3.83□□□□□ -1.8
SLC44A4Q53GD3 HSPE1P8-201ENST00000406997 288 ntBASIC3.83□□□□□ -1.8
SLC44A4Q53GD3 RNA5SP129-201ENST00000410276 118 ntBASIC3.83□□□□□ -1.8
SLC44A4Q53GD3 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.83□□□□□ -1.8
SLC44A4Q53GD3 MTCO3P46-201ENST00000425787 232 ntBASIC3.83□□□□□ -1.8
SLC44A4Q53GD3 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.83□□□□□ -1.8
SLC44A4Q53GD3 AC098591.2-201ENST00000510152 315 ntBASIC3.83□□□□□ -1.8
SLC44A4Q53GD3 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms