Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PRIM1P49642 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PRIM1P49642 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PRIM1P49642 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PRIM1P49642 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
PRIM1P49642 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PRIM1P49642 RNU6-512P-201ENST00000364438 103 ntBASIC6.18□□□□□ -1.42
PRIM1P49642 Y_RNA.272-201ENST00000364696 102 ntBASIC6.18□□□□□ -1.42
PRIM1P49642 RN7SKP16-201ENST00000410180 299 ntBASIC6.18□□□□□ -1.42
PRIM1P49642 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC6.18□□□□□ -1.42
PRIM1P49642 AC016700.2-201ENST00000446011 156 ntBASIC6.18□□□□□ -1.42
PRIM1P49642 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC6.18□□□□□ -1.42
PRIM1P49642 RPL30P1-201ENST00000488676 339 ntBASIC6.18□□□□□ -1.42
PRIM1P49642 RN7SL558P-201ENST00000497468 299 ntBASIC6.18□□□□□ -1.42
PRIM1P49642 RNU6-377P-201ENST00000515965 102 ntBASIC6.18□□□□□ -1.42
PRIM1P49642 RN7SKP234-201ENST00000517173 224 ntBASIC6.18□□□□□ -1.42
PRIM1P49642 ATP5F1P5-201ENST00000526403 760 ntBASIC6.18□□□□□ -1.42
PRIM1P49642 AC106785.1-201ENST00000565935 262 ntBASIC6.18□□□□□ -1.42
PRIM1P49642 AC060766.3-201ENST00000591442 263 ntBASIC6.18□□□□□ -1.42
PRIM1P49642 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC6.18□□□□□ -1.42
PRIM1P49642 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC6.18□□□□□ -1.42
PRIM1P49642 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC6.18□□□□□ -1.42
PRIM1P49642 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC6.18□□□□□ -1.42
PRIM1P49642 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC6.18□□□□□ -1.42
PRIM1P49642 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PRIM1P49642 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC6.18□□□□□ -1.42
PRIM1P49642 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
PRIM1P49642 AC025031.4-201ENST00000621248 3271 ntBASIC6.17□□□□□ -1.42
PRIM1P49642 BCLAF1P2-201ENST00000624956 2609 ntBASIC6.17□□□□□ -1.42
PRIM1P49642 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC6.17□□□□□ -1.42
PRIM1P49642 SMG1P6-201ENST00000532337 2930 ntBASIC6.17□□□□□ -1.42
PRIM1P49642 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC6.17□□□□□ -1.42
PRIM1P49642 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC6.17□□□□□ -1.42
PRIM1P49642 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PRIM1P49642 RNU6-263P-201ENST00000363811 107 ntBASIC6.17□□□□□ -1.42
PRIM1P49642 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC6.17□□□□□ -1.42
PRIM1P49642 Y_RNA.497-201ENST00000384447 98 ntBASIC6.17□□□□□ -1.42
PRIM1P49642 RNU6ATAC5P-201ENST00000388104 126 ntBASIC6.17□□□□□ -1.42
PRIM1P49642 MTATP6P4-201ENST00000427725 675 ntBASIC6.17□□□□□ -1.42
PRIM1P49642 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC6.17□□□□□ -1.42
PRIM1P49642 RN7SL817P-201ENST00000480777 288 ntBASIC6.17□□□□□ -1.42
PRIM1P49642 SNORA27.4-201ENST00000516650 95 ntBASIC6.17□□□□□ -1.42
PRIM1P49642 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC6.17□□□□□ -1.42
PRIM1P49642 AC093249.4-201ENST00000564755 259 ntBASIC6.17□□□□□ -1.42
PRIM1P49642 MIR4472-2-201ENST00000582069 67 ntBASIC6.17□□□□□ -1.42
PRIM1P49642 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC6.17□□□□□ -1.42
PRIM1P49642 RMST_6.1-201ENST00000611980 203 ntBASIC6.17□□□□□ -1.42
PRIM1P49642 AC114781.5-201ENST00000615297 108 ntBASIC6.17□□□□□ -1.42
PRIM1P49642 AC011476.5-201ENST00000615594 130 ntBASIC6.17□□□□□ -1.42
PRIM1P49642 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC6.17□□□□□ -1.42
PRIM1P49642 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC6.17□□□□□ -1.42
PRIM1P49642 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
PRIM1P49642 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC6.17□□□□□ -1.42
PRIM1P49642 AC104623.2-202ENST00000623477 4002 ntBASIC6.17□□□□□ -1.42
PRIM1P49642 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PRIM1P49642 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PRIM1P49642 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC6.16□□□□□ -1.42
PRIM1P49642 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
PRIM1P49642 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PRIM1P49642 MIR23B-201ENST00000384832 97 ntBASIC6.16□□□□□ -1.42
PRIM1P49642 GNG5P5-201ENST00000420444 220 ntBASIC6.16□□□□□ -1.42
PRIM1P49642 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC6.16□□□□□ -1.42
PRIM1P49642 RPS20P1-201ENST00000434853 354 ntBASIC6.16□□□□□ -1.42
PRIM1P49642 AL590399.6-201ENST00000446396 307 ntBASIC6.16□□□□□ -1.42
PRIM1P49642 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC6.16□□□□□ -1.42
PRIM1P49642 U8.22-201ENST00000459141 133 ntBASIC6.16□□□□□ -1.42
PRIM1P49642 HSPE1P6-201ENST00000479457 291 ntBASIC6.16□□□□□ -1.42
PRIM1P49642 UBE2Q2P9-201ENST00000490086 202 ntBASIC6.16□□□□□ -1.42
PRIM1P49642 FTH1P11-201ENST00000517577 551 ntBASIC6.16□□□□□ -1.42
PRIM1P49642 TBCA-207ENST00000520039 157 ntTSL 3 BASIC6.16□□□□□ -1.42
PRIM1P49642 UTP23-205ENST00000520733 369 ntTSL 3 BASIC6.16□□□□□ -1.42
PRIM1P49642 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
PRIM1P49642 CYCSP29-201ENST00000533731 318 ntBASIC6.16□□□□□ -1.42
PRIM1P49642 SNORA74C-1-201ENST00000580726 201 ntBASIC6.16□□□□□ -1.42
PRIM1P49642 MIR3936-201ENST00000584304 110 ntBASIC6.16□□□□□ -1.42
PRIM1P49642 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC6.16□□□□□ -1.42
PRIM1P49642 SCARNA4-201ENST00000629045 128 ntBASIC6.16□□□□□ -1.42
PRIM1P49642 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC6.16□□□□□ -1.42
PRIM1P49642 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC6.16□□□□□ -1.42
PRIM1P49642 AC116096.1-201ENST00000566804 2314 ntBASIC6.16□□□□□ -1.42
PRIM1P49642 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
PRIM1P49642 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC6.16□□□□□ -1.42
PRIM1P49642 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
PRIM1P49642 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC6.15□□□□□ -1.42
PRIM1P49642 AC005005.4-201ENST00000623789 16698 ntBASIC6.15□□□□□ -1.42
PRIM1P49642 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC6.15□□□□□ -1.42
PRIM1P49642 AC233981.2-201ENST00000611524 1614 ntBASIC6.15□□□□□ -1.42
PRIM1P49642 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
PRIM1P49642 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC6.15□□□□□ -1.42
PRIM1P49642 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC6.15□□□□□ -1.42
PRIM1P49642 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC6.15□□□□□ -1.42
PRIM1P49642 MIR410-201ENST00000362222 80 ntBASIC6.15□□□□□ -1.42
PRIM1P49642 RNU5A-1-201ENST00000362698 116 ntBASIC6.15□□□□□ -1.42
PRIM1P49642 SNORD115-32-201ENST00000364079 82 ntBASIC6.15□□□□□ -1.42
PRIM1P49642 RPL7AP25-201ENST00000423357 805 ntBASIC6.15□□□□□ -1.42
PRIM1P49642 IGKV1OR9-2-201ENST00000431378 277 ntBASIC6.15□□□□□ -1.42
PRIM1P49642 RPS15AP7-201ENST00000439294 405 ntBASIC6.15□□□□□ -1.42
PRIM1P49642 AC079168.2-201ENST00000453977 416 ntBASIC6.15□□□□□ -1.42
PRIM1P49642 SNORD2.1-201ENST00000458762 69 ntBASIC6.15□□□□□ -1.42
PRIM1P49642 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC6.15□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms