Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 RNU6-513P-201ENST00000516104 104 ntBASIC4.76□□□□□ -1.65
CHRNA4P43681 RN7SKP276-201ENST00000516242 268 ntBASIC4.76□□□□□ -1.65
CHRNA4P43681 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.76□□□□□ -1.65
CHRNA4P43681 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.76□□□□□ -1.65
CHRNA4P43681 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.76□□□□□ -1.65
CHRNA4P43681 RN7SL652P-201ENST00000577769 300 ntBASIC4.76□□□□□ -1.65
CHRNA4P43681 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.76□□□□□ -1.65
CHRNA4P43681 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC4.76□□□□□ -1.65
CHRNA4P43681 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.76□□□□□ -1.65
CHRNA4P43681 AC009314.1-201ENST00000603871 304 ntBASIC4.76□□□□□ -1.65
CHRNA4P43681 MIR15A-201ENST00000607334 83 ntBASIC4.76□□□□□ -1.65
CHRNA4P43681 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.76□□□□□ -1.65
CHRNA4P43681 AC039056.2-201ENST00000622261 511 ntBASIC4.76□□□□□ -1.65
CHRNA4P43681 AL136164.3-201ENST00000624429 3978 ntBASIC4.76□□□□□ -1.65
CHRNA4P43681 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC4.76□□□□□ -1.65
CHRNA4P43681 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CHRNA4P43681 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.76□□□□□ -1.65
CHRNA4P43681 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
CHRNA4P43681 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
CHRNA4P43681 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC4.76□□□□□ -1.65
CHRNA4P43681 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.76□□□□□ -1.65
CHRNA4P43681 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CHRNA4P43681 DDX10P1-201ENST00000448545 1933 ntBASIC4.76□□□□□ -1.65
CHRNA4P43681 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.75□□□□□ -1.65
CHRNA4P43681 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CHRNA4P43681 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CHRNA4P43681 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CHRNA4P43681 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
CHRNA4P43681 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.75□□□□□ -1.65
CHRNA4P43681 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.75□□□□□ -1.65
CHRNA4P43681 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CHRNA4P43681 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
CHRNA4P43681 MIR410-201ENST00000362222 80 ntBASIC4.75□□□□□ -1.65
CHRNA4P43681 Y_RNA.75-201ENST00000362927 97 ntBASIC4.75□□□□□ -1.65
CHRNA4P43681 RNU6-270P-201ENST00000364131 105 ntBASIC4.75□□□□□ -1.65
CHRNA4P43681 Y_RNA.412-201ENST00000384001 104 ntBASIC4.75□□□□□ -1.65
CHRNA4P43681 RNU6-21P-201ENST00000384710 107 ntBASIC4.75□□□□□ -1.65
CHRNA4P43681 RNU6-817P-201ENST00000391083 104 ntBASIC4.75□□□□□ -1.65
CHRNA4P43681 RN7SKP100-201ENST00000411258 284 ntBASIC4.75□□□□□ -1.65
CHRNA4P43681 AL353621.1-201ENST00000418219 243 ntBASIC4.75□□□□□ -1.65
CHRNA4P43681 RPL30P13-201ENST00000418873 348 ntBASIC4.75□□□□□ -1.65
CHRNA4P43681 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.75□□□□□ -1.65
CHRNA4P43681 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC4.75□□□□□ -1.65
CHRNA4P43681 AC011742.1-201ENST00000431448 434 ntBASIC4.75□□□□□ -1.65
CHRNA4P43681 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.75□□□□□ -1.65
CHRNA4P43681 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.75□□□□□ -1.65
CHRNA4P43681 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC4.75□□□□□ -1.65
CHRNA4P43681 RNU6-1218P-201ENST00000458990 108 ntBASIC4.75□□□□□ -1.65
CHRNA4P43681 AC010683.1-201ENST00000473673 378 ntBASIC4.75□□□□□ -1.65
CHRNA4P43681 VN1R105P-201ENST00000486595 910 ntBASIC4.75□□□□□ -1.65
CHRNA4P43681 RNU1-6P-201ENST00000516290 144 ntBASIC4.75□□□□□ -1.65
CHRNA4P43681 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.75□□□□□ -1.65
CHRNA4P43681 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CHRNA4P43681 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC4.75□□□□□ -1.65
CHRNA4P43681 AP004242.1-201ENST00000533701 349 ntBASIC4.75□□□□□ -1.65
CHRNA4P43681 AK6P2-201ENST00000549020 471 ntBASIC4.75□□□□□ -1.65
CHRNA4P43681 EDDM3DP-201ENST00000554692 434 ntBASIC4.75□□□□□ -1.65
CHRNA4P43681 AC105129.1-201ENST00000560250 297 ntBASIC4.75□□□□□ -1.65
CHRNA4P43681 AC090617.3-201ENST00000573670 475 ntBASIC4.75□□□□□ -1.65
CHRNA4P43681 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CHRNA4P43681 MIR4423-201ENST00000580922 80 ntBASIC4.75□□□□□ -1.65
CHRNA4P43681 FAM25E-202ENST00000608562 189 ntBASIC4.75□□□□□ -1.65
CHRNA4P43681 AC023043.4-201ENST00000612081 449 ntBASIC4.75□□□□□ -1.65
CHRNA4P43681 TUG1_4.1-201ENST00000619464 181 ntBASIC4.75□□□□□ -1.65
CHRNA4P43681 AC099506.2-201ENST00000623074 221 ntBASIC4.75□□□□□ -1.65
CHRNA4P43681 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC4.75□□□□□ -1.65
CHRNA4P43681 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.75□□□□□ -1.65
CHRNA4P43681 DHX9P1-201ENST00000436565 3076 ntBASIC4.75□□□□□ -1.65
CHRNA4P43681 AP000542.2-201ENST00000623199 6179 ntBASIC4.75□□□□□ -1.65
CHRNA4P43681 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
CHRNA4P43681 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CHRNA4P43681 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC4.74□□□□□ -1.65
CHRNA4P43681 Y_RNA.136-201ENST00000363444 102 ntBASIC4.74□□□□□ -1.65
CHRNA4P43681 RNU6-1243P-201ENST00000364028 107 ntBASIC4.74□□□□□ -1.65
CHRNA4P43681 RN7SKP224-201ENST00000364140 325 ntBASIC4.74□□□□□ -1.65
CHRNA4P43681 SNORD51-201ENST00000384320 80 ntBASIC4.74□□□□□ -1.65
CHRNA4P43681 RNU6-1064P-201ENST00000410626 104 ntBASIC4.74□□□□□ -1.65
CHRNA4P43681 RNU5A-5P-201ENST00000411054 116 ntBASIC4.74□□□□□ -1.65
CHRNA4P43681 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC4.74□□□□□ -1.65
CHRNA4P43681 AC005154.2-201ENST00000438110 379 ntBASIC4.74□□□□□ -1.65
CHRNA4P43681 RNU6-953P-201ENST00000459154 107 ntBASIC4.74□□□□□ -1.65
CHRNA4P43681 AC053481.1-201ENST00000467217 306 ntBASIC4.74□□□□□ -1.65
CHRNA4P43681 RPS26P21-201ENST00000475397 348 ntBASIC4.74□□□□□ -1.65
CHRNA4P43681 RPS27AP9-201ENST00000477681 438 ntBASIC4.74□□□□□ -1.65
CHRNA4P43681 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC4.74□□□□□ -1.65
CHRNA4P43681 MIR4737-201ENST00000583979 81 ntBASIC4.74□□□□□ -1.65
CHRNA4P43681 AC004852.3-201ENST00000614131 326 ntBASIC4.74□□□□□ -1.65
CHRNA4P43681 AC091953.3-201ENST00000623220 236 ntBASIC4.74□□□□□ -1.65
CHRNA4P43681 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CHRNA4P43681 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CHRNA4P43681 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC4.73□□□□□ -1.65
CHRNA4P43681 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CHRNA4P43681 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
CHRNA4P43681 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CHRNA4P43681 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.73□□□□□ -1.65
CHRNA4P43681 AL590240.1-201ENST00000334118 313 ntBASIC4.73□□□□□ -1.65
CHRNA4P43681 UBBP2-201ENST00000376781 231 ntBASIC4.73□□□□□ -1.65
CHRNA4P43681 Y_RNA.446-201ENST00000384178 104 ntBASIC4.73□□□□□ -1.65
CHRNA4P43681 RNU11-4P-201ENST00000391149 133 ntBASIC4.73□□□□□ -1.65
CHRNA4P43681 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms