Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 RNU6-3P-201ENST00000384314 107 ntBASIC2.1□□□□□ -2.07
BRD4O60885 RNU6-549P-201ENST00000384433 107 ntBASIC2.1□□□□□ -2.07
BRD4O60885 RNU6-2-201ENST00000384627 107 ntBASIC2.1□□□□□ -2.07
BRD4O60885 RNU6-9-201ENST00000384776 107 ntBASIC2.1□□□□□ -2.07
BRD4O60885 RNU6-33P-201ENST00000384793 107 ntBASIC2.1□□□□□ -2.07
BRD4O60885 MIR16-1-201ENST00000385271 89 ntBASIC2.1□□□□□ -2.07
BRD4O60885 MIR320A-201ENST00000385302 82 ntBASIC2.1□□□□□ -2.07
BRD4O60885 MIR676-201ENST00000390702 67 ntBASIC2.1□□□□□ -2.07
BRD4O60885 RNU2-47P-201ENST00000410649 186 ntBASIC2.1□□□□□ -2.07
BRD4O60885 RPS4XP11-201ENST00000446897 772 ntBASIC2.1□□□□□ -2.07
BRD4O60885 AL050341.1-201ENST00000447743 313 ntBASIC2.1□□□□□ -2.07
BRD4O60885 ATG12P2-201ENST00000456830 416 ntBASIC2.1□□□□□ -2.07
BRD4O60885 BZW1P2-201ENST00000473537 826 ntBASIC2.1□□□□□ -2.07
BRD4O60885 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC2.1□□□□□ -2.07
BRD4O60885 AC113420.1-201ENST00000507903 571 ntBASIC2.1□□□□□ -2.07
BRD4O60885 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC2.1□□□□□ -2.07
BRD4O60885 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC2.1□□□□□ -2.07
BRD4O60885 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC2.1□□□□□ -2.07
BRD4O60885 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.1□□□□□ -2.07
BRD4O60885 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.1□□□□□ -2.07
BRD4O60885 AC006518.2-201ENST00000542513 940 ntBASIC2.1□□□□□ -2.07
BRD4O60885 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC2.1□□□□□ -2.07
BRD4O60885 AL022067.1-201ENST00000602426 454 ntBASIC2.1□□□□□ -2.07
BRD4O60885 AC133794.1-201ENST00000602731 914 ntBASIC2.1□□□□□ -2.07
BRD4O60885 MTATP6P2-201ENST00000603319 678 ntBASIC2.1□□□□□ -2.07
BRD4O60885 AC013553.2-201ENST00000604244 589 ntBASIC2.1□□□□□ -2.07
BRD4O60885 RNU6-6P-201ENST00000606623 107 ntBASIC2.1□□□□□ -2.07
BRD4O60885 AC007038.2-201ENST00000608095 740 ntBASIC2.1□□□□□ -2.07
BRD4O60885 RMST_6.1-201ENST00000611980 203 ntBASIC2.1□□□□□ -2.07
BRD4O60885 AC093875.1-201ENST00000623688 504 ntBASIC2.1□□□□□ -2.07
BRD4O60885 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC2.1□□□□□ -2.07
BRD4O60885 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.09□□□□□ -2.07
BRD4O60885 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC2.09□□□□□ -2.08
BRD4O60885 AL356432.1-201ENST00000405809 419 ntBASIC2.09□□□□□ -2.08
BRD4O60885 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC2.09□□□□□ -2.08
BRD4O60885 RPL26P6-201ENST00000440913 438 ntBASIC2.09□□□□□ -2.08
BRD4O60885 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC2.09□□□□□ -2.08
BRD4O60885 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.09□□□□□ -2.08
BRD4O60885 RNU7-140P-201ENST00000459546 60 ntBASIC2.09□□□□□ -2.08
BRD4O60885 KLF3P2-201ENST00000465138 268 ntBASIC2.09□□□□□ -2.08
BRD4O60885 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC2.09□□□□□ -2.08
BRD4O60885 SCARNA3-201ENST00000517097 143 ntBASIC2.09□□□□□ -2.08
BRD4O60885 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.09□□□□□ -2.08
BRD4O60885 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC2.09□□□□□ -2.08
BRD4O60885 CYB5AP5-201ENST00000549779 389 ntBASIC2.09□□□□□ -2.08
BRD4O60885 AC015720.1-201ENST00000565251 277 ntBASIC2.09□□□□□ -2.08
BRD4O60885 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.09□□□□□ -2.08
BRD4O60885 AC010928.2-201ENST00000588017 287 ntBASIC2.09□□□□□ -2.08
BRD4O60885 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
BRD4O60885 RNU6-353P-201ENST00000364266 108 ntBASIC2.08□□□□□ -2.08
BRD4O60885 OR1L1-202ENST00000373686 1083 ntBASIC2.08□□□□□ -2.08
BRD4O60885 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC2.08□□□□□ -2.08
BRD4O60885 MTCO2P31-201ENST00000402702 684 ntBASIC2.08□□□□□ -2.08
BRD4O60885 AC023141.4-201ENST00000412031 328 ntBASIC2.08□□□□□ -2.08
BRD4O60885 TAF13P2-201ENST00000416876 286 ntBASIC2.08□□□□□ -2.08
BRD4O60885 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC2.08□□□□□ -2.08
BRD4O60885 RPL31P63-201ENST00000422565 375 ntBASIC2.08□□□□□ -2.08
BRD4O60885 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC2.08□□□□□ -2.08
BRD4O60885 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC2.08□□□□□ -2.08
BRD4O60885 AL049734.2-201ENST00000441066 616 ntBASIC2.08□□□□□ -2.08
BRD4O60885 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC2.08□□□□□ -2.08
BRD4O60885 NDUFA5P7-201ENST00000452914 242 ntBASIC2.08□□□□□ -2.08
BRD4O60885 XACT-201ENST00000468762 497 ntTSL 5 BASIC2.08□□□□□ -2.08
BRD4O60885 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
BRD4O60885 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.08□□□□□ -2.08
BRD4O60885 RNA5SP220-201ENST00000516298 104 ntBASIC2.08□□□□□ -2.08
BRD4O60885 MIR892C-201ENST00000516410 77 ntBASIC2.08□□□□□ -2.08
BRD4O60885 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.08□□□□□ -2.08
BRD4O60885 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.08□□□□□ -2.08
BRD4O60885 MTND4LP25-201ENST00000570218 163 ntBASIC2.08□□□□□ -2.08
BRD4O60885 AC008498.1-201ENST00000613012 531 ntBASIC2.08□□□□□ -2.08
BRD4O60885 AL157834.3-201ENST00000615543 103 ntBASIC2.08□□□□□ -2.08
BRD4O60885 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
BRD4O60885 ZNF209P-201ENST00000593450 2304 ntBASIC2.07□□□□□ -2.08
BRD4O60885 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
BRD4O60885 RNU4-51P-201ENST00000364206 140 ntBASIC2.07□□□□□ -2.08
BRD4O60885 XKRYP1-201ENST00000423438 492 ntBASIC2.07□□□□□ -2.08
BRD4O60885 XKRYP2-201ENST00000432915 492 ntBASIC2.07□□□□□ -2.08
BRD4O60885 DDX3P2-201ENST00000446138 111 ntBASIC2.07□□□□□ -2.08
BRD4O60885 AL096829.2-201ENST00000446582 742 ntBASIC2.07□□□□□ -2.08
BRD4O60885 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.07□□□□□ -2.08
BRD4O60885 RPS15AP36-201ENST00000492022 382 ntBASIC2.07□□□□□ -2.08
BRD4O60885 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC2.07□□□□□ -2.08
BRD4O60885 AC048346.1-201ENST00000510247 144 ntBASIC2.07□□□□□ -2.08
BRD4O60885 ATP5EP1-201ENST00000510257 156 ntBASIC2.07□□□□□ -2.08
BRD4O60885 AL133241.1-201ENST00000556832 487 ntBASIC2.07□□□□□ -2.08
BRD4O60885 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.07□□□□□ -2.08
BRD4O60885 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.07□□□□□ -2.08
BRD4O60885 MTCO1P23-201ENST00000415223 1526 ntBASIC2.06□□□□□ -2.08
BRD4O60885 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
BRD4O60885 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC2.06□□□□□ -2.08
BRD4O60885 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC2.06□□□□□ -2.08
BRD4O60885 RNU6-207P-201ENST00000384137 107 ntBASIC2.06□□□□□ -2.08
BRD4O60885 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
BRD4O60885 RNU6-1328P-201ENST00000410938 106 ntBASIC2.06□□□□□ -2.08
BRD4O60885 AL445669.1-201ENST00000426743 755 ntBASIC2.06□□□□□ -2.08
BRD4O60885 AC005345.1-201ENST00000431868 217 ntBASIC2.06□□□□□ -2.08
BRD4O60885 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC2.06□□□□□ -2.08
BRD4O60885 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC2.06□□□□□ -2.08
BRD4O60885 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms