Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 snoU13.6-201ENST00000458785 104 ntBASIC5.77□□□□□ -1.49
PCDHGA4Q9Y5G9 ABCC13-202ENST00000463099 3842 ntBASIC5.77□□□□□ -1.49
PCDHGA4Q9Y5G9 COX6B1P2-201ENST00000489624 230 ntBASIC5.77□□□□□ -1.49
PCDHGA4Q9Y5G9 AC022790.1-201ENST00000522872 204 ntBASIC5.77□□□□□ -1.49
PCDHGA4Q9Y5G9 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PCDHGA4Q9Y5G9 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.77□□□□□ -1.49
PCDHGA4Q9Y5G9 AL121603.1-201ENST00000553815 142 ntBASIC5.77□□□□□ -1.49
PCDHGA4Q9Y5G9 AC022404.1-201ENST00000555320 273 ntBASIC5.77□□□□□ -1.49
PCDHGA4Q9Y5G9 AL390726.5-202ENST00000564800 256 ntBASIC5.77□□□□□ -1.49
PCDHGA4Q9Y5G9 AC233702.9-201ENST00000581528 203 ntBASIC5.77□□□□□ -1.49
PCDHGA4Q9Y5G9 MIR132-201ENST00000591554 101 ntBASIC5.77□□□□□ -1.49
PCDHGA4Q9Y5G9 U6.99-201ENST00000637524 83 ntBASIC5.77□□□□□ -1.49
PCDHGA4Q9Y5G9 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PCDHGA4Q9Y5G9 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PCDHGA4Q9Y5G9 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PCDHGA4Q9Y5G9 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PCDHGA4Q9Y5G9 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
PCDHGA4Q9Y5G9 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
PCDHGA4Q9Y5G9 AC083843.2-201ENST00000568248 6253 ntBASIC5.77□□□□□ -1.49
PCDHGA4Q9Y5G9 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PCDHGA4Q9Y5G9 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.77□□□□□ -1.49
PCDHGA4Q9Y5G9 AC092376.2-201ENST00000622621 4116 ntBASIC5.77□□□□□ -1.49
PCDHGA4Q9Y5G9 AL121839.2-201ENST00000565058 6943 ntBASIC5.76□□□□□ -1.49
PCDHGA4Q9Y5G9 AP001029.2-203ENST00000589795 4910 ntBASIC5.76□□□□□ -1.49
PCDHGA4Q9Y5G9 OR13C1P-202ENST00000641378 2919 ntBASIC5.76□□□□□ -1.49
PCDHGA4Q9Y5G9 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.76□□□□□ -1.49
PCDHGA4Q9Y5G9 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PCDHGA4Q9Y5G9 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PCDHGA4Q9Y5G9 RNU6-597P-201ENST00000365620 102 ntBASIC5.76□□□□□ -1.49
PCDHGA4Q9Y5G9 AC068538.1-201ENST00000376856 336 ntBASIC5.76□□□□□ -1.49
PCDHGA4Q9Y5G9 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PCDHGA4Q9Y5G9 SNORA66-201ENST00000384792 133 ntBASIC5.76□□□□□ -1.49
PCDHGA4Q9Y5G9 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
PCDHGA4Q9Y5G9 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.76□□□□□ -1.49
PCDHGA4Q9Y5G9 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
PCDHGA4Q9Y5G9 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.76□□□□□ -1.49
PCDHGA4Q9Y5G9 AL162739.1-201ENST00000450606 307 ntBASIC5.76□□□□□ -1.49
PCDHGA4Q9Y5G9 RN7SL515P-201ENST00000463999 297 ntBASIC5.76□□□□□ -1.49
PCDHGA4Q9Y5G9 AC091179.3-201ENST00000474761 144 ntBASIC5.76□□□□□ -1.49
PCDHGA4Q9Y5G9 MAL2-206ENST00000522187 547 ntTSL 4 BASIC5.76□□□□□ -1.49
PCDHGA4Q9Y5G9 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
PCDHGA4Q9Y5G9 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.76□□□□□ -1.49
PCDHGA4Q9Y5G9 AC012640.5-201ENST00000623897 319 ntBASIC5.76□□□□□ -1.49
PCDHGA4Q9Y5G9 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.76□□□□□ -1.49
PCDHGA4Q9Y5G9 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
PCDHGA4Q9Y5G9 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.76□□□□□ -1.49
PCDHGA4Q9Y5G9 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
PCDHGA4Q9Y5G9 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PCDHGA4Q9Y5G9 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PCDHGA4Q9Y5G9 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PCDHGA4Q9Y5G9 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.76□□□□□ -1.49
PCDHGA4Q9Y5G9 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
PCDHGA4Q9Y5G9 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.75□□□□□ -1.49
PCDHGA4Q9Y5G9 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PCDHGA4Q9Y5G9 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PCDHGA4Q9Y5G9 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PCDHGA4Q9Y5G9 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PCDHGA4Q9Y5G9 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
PCDHGA4Q9Y5G9 RNU6-1285P-201ENST00000363480 105 ntBASIC5.75□□□□□ -1.49
PCDHGA4Q9Y5G9 RNU6-1205P-201ENST00000363625 106 ntBASIC5.75□□□□□ -1.49
PCDHGA4Q9Y5G9 SNORD58C-201ENST00000365223 64 ntBASIC5.75□□□□□ -1.49
PCDHGA4Q9Y5G9 SNORA36A-201ENST00000384221 132 ntBASIC5.75□□□□□ -1.49
PCDHGA4Q9Y5G9 RPL21P17-201ENST00000397467 475 ntBASIC5.75□□□□□ -1.49
PCDHGA4Q9Y5G9 MIR937-201ENST00000401271 86 ntBASIC5.75□□□□□ -1.49
PCDHGA4Q9Y5G9 AL121835.1-201ENST00000404250 354 ntBASIC5.75□□□□□ -1.49
PCDHGA4Q9Y5G9 RNU4-43P-201ENST00000410628 137 ntBASIC5.75□□□□□ -1.49
PCDHGA4Q9Y5G9 MYL6P5-201ENST00000412707 459 ntBASIC5.75□□□□□ -1.49
PCDHGA4Q9Y5G9 RPS26P42-201ENST00000413485 326 ntBASIC5.75□□□□□ -1.49
PCDHGA4Q9Y5G9 AC007919.1-201ENST00000429380 217 ntBASIC5.75□□□□□ -1.49
PCDHGA4Q9Y5G9 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.75□□□□□ -1.49
PCDHGA4Q9Y5G9 SNRPGP7-201ENST00000469016 106 ntBASIC5.75□□□□□ -1.49
PCDHGA4Q9Y5G9 UQCRHP4-201ENST00000471686 272 ntBASIC5.75□□□□□ -1.49
PCDHGA4Q9Y5G9 MIR1273E-201ENST00000581165 102 ntBASIC5.75□□□□□ -1.49
PCDHGA4Q9Y5G9 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.75□□□□□ -1.49
PCDHGA4Q9Y5G9 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.75□□□□□ -1.49
PCDHGA4Q9Y5G9 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PCDHGA4Q9Y5G9 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC5.75□□□□□ -1.49
PCDHGA4Q9Y5G9 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PCDHGA4Q9Y5G9 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PCDHGA4Q9Y5G9 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
PCDHGA4Q9Y5G9 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
PCDHGA4Q9Y5G9 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC5.75□□□□□ -1.49
PCDHGA4Q9Y5G9 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
PCDHGA4Q9Y5G9 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PCDHGA4Q9Y5G9 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.74□□□□□ -1.49
PCDHGA4Q9Y5G9 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.74□□□□□ -1.49
PCDHGA4Q9Y5G9 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PCDHGA4Q9Y5G9 DEFB108F-201ENST00000344638 222 ntBASIC5.74□□□□□ -1.49
PCDHGA4Q9Y5G9 Y_RNA.114-201ENST00000363265 113 ntBASIC5.74□□□□□ -1.49
PCDHGA4Q9Y5G9 RNU1-140P-201ENST00000365040 165 ntBASIC5.74□□□□□ -1.49
PCDHGA4Q9Y5G9 Y_RNA.348-201ENST00000365403 103 ntBASIC5.74□□□□□ -1.49
PCDHGA4Q9Y5G9 RNU6-710P-201ENST00000410424 105 ntBASIC5.74□□□□□ -1.49
PCDHGA4Q9Y5G9 RPL35AP3-201ENST00000414680 288 ntBASIC5.74□□□□□ -1.49
PCDHGA4Q9Y5G9 CYCSP49-201ENST00000420810 319 ntBASIC5.74□□□□□ -1.49
PCDHGA4Q9Y5G9 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.74□□□□□ -1.49
PCDHGA4Q9Y5G9 SDC4P-201ENST00000453285 601 ntBASIC5.74□□□□□ -1.49
PCDHGA4Q9Y5G9 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.74□□□□□ -1.49
PCDHGA4Q9Y5G9 AC011276.1-201ENST00000469688 323 ntBASIC5.74□□□□□ -1.49
PCDHGA4Q9Y5G9 AL122020.1-201ENST00000472287 459 ntBASIC5.74□□□□□ -1.49
PCDHGA4Q9Y5G9 RNU6-1256P-201ENST00000516539 103 ntBASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms