Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
PCDHB11Q9Y5F2 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PCDHB11Q9Y5F2 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.05□□□□□ -1.6
PCDHB11Q9Y5F2 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.05□□□□□ -1.6
PCDHB11Q9Y5F2 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC5.05□□□□□ -1.6
PCDHB11Q9Y5F2 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
PCDHB11Q9Y5F2 U3.3-201ENST00000362986 216 ntBASIC5.05□□□□□ -1.6
PCDHB11Q9Y5F2 Y_RNA.304-201ENST00000365011 112 ntBASIC5.05□□□□□ -1.6
PCDHB11Q9Y5F2 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PCDHB11Q9Y5F2 RNU6-514P-201ENST00000384208 107 ntBASIC5.05□□□□□ -1.6
PCDHB11Q9Y5F2 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC5.05□□□□□ -1.6
PCDHB11Q9Y5F2 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.05□□□□□ -1.6
PCDHB11Q9Y5F2 RN7SL814P-201ENST00000487715 300 ntBASIC5.05□□□□□ -1.6
PCDHB11Q9Y5F2 RPL30P1-201ENST00000488676 339 ntBASIC5.05□□□□□ -1.6
PCDHB11Q9Y5F2 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.05□□□□□ -1.6
PCDHB11Q9Y5F2 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.05□□□□□ -1.6
PCDHB11Q9Y5F2 RNU7-110P-201ENST00000516891 62 ntBASIC5.05□□□□□ -1.6
PCDHB11Q9Y5F2 RN7SKP260-201ENST00000516907 149 ntBASIC5.05□□□□□ -1.6
PCDHB11Q9Y5F2 AC027288.2-201ENST00000553028 243 ntBASIC5.05□□□□□ -1.6
PCDHB11Q9Y5F2 H3F3AP1-201ENST00000559984 334 ntBASIC5.05□□□□□ -1.6
PCDHB11Q9Y5F2 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC5.05□□□□□ -1.6
PCDHB11Q9Y5F2 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.05□□□□□ -1.6
PCDHB11Q9Y5F2 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
PCDHB11Q9Y5F2 AC091953.3-201ENST00000623220 236 ntBASIC5.05□□□□□ -1.6
PCDHB11Q9Y5F2 AC241585.2-209ENST00000638217 143 ntBASIC5.05□□□□□ -1.6
PCDHB11Q9Y5F2 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PCDHB11Q9Y5F2 AC008725.1-201ENST00000605123 2263 ntBASIC5.05□□□□□ -1.6
PCDHB11Q9Y5F2 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.05□□□□□ -1.6
PCDHB11Q9Y5F2 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PCDHB11Q9Y5F2 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
PCDHB11Q9Y5F2 AC112198.2-201ENST00000426589 6996 ntBASIC5.05□□□□□ -1.6
PCDHB11Q9Y5F2 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
PCDHB11Q9Y5F2 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PCDHB11Q9Y5F2 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
PCDHB11Q9Y5F2 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
PCDHB11Q9Y5F2 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PCDHB11Q9Y5F2 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PCDHB11Q9Y5F2 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC5.04□□□□□ -1.6
PCDHB11Q9Y5F2 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.04□□□□□ -1.6
PCDHB11Q9Y5F2 AC010300.1-201ENST00000600671 5134 ntBASIC5.04□□□□□ -1.6
PCDHB11Q9Y5F2 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PCDHB11Q9Y5F2 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
PCDHB11Q9Y5F2 UBE2WP1-201ENST00000362030 340 ntBASIC5.04□□□□□ -1.6
PCDHB11Q9Y5F2 RNA5SP361-201ENST00000362686 118 ntBASIC5.04□□□□□ -1.6
PCDHB11Q9Y5F2 RNA5SP123-201ENST00000363244 119 ntBASIC5.04□□□□□ -1.6
PCDHB11Q9Y5F2 RNA5SP223-201ENST00000365174 120 ntBASIC5.04□□□□□ -1.6
PCDHB11Q9Y5F2 SNORA56-201ENST00000383966 129 ntBASIC5.04□□□□□ -1.6
PCDHB11Q9Y5F2 RNU6-804P-201ENST00000384286 107 ntBASIC5.04□□□□□ -1.6
PCDHB11Q9Y5F2 UBA52P6-201ENST00000399822 382 ntBASIC5.04□□□□□ -1.6
PCDHB11Q9Y5F2 RNU6-394P-201ENST00000410735 107 ntBASIC5.04□□□□□ -1.6
PCDHB11Q9Y5F2 AC016397.1-201ENST00000412463 242 ntBASIC5.04□□□□□ -1.6
PCDHB11Q9Y5F2 EIF1AXP1-201ENST00000419267 435 ntBASIC5.04□□□□□ -1.6
PCDHB11Q9Y5F2 DNAJC19P7-201ENST00000428811 344 ntBASIC5.04□□□□□ -1.6
PCDHB11Q9Y5F2 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC5.04□□□□□ -1.6
PCDHB11Q9Y5F2 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC5.04□□□□□ -1.6
PCDHB11Q9Y5F2 PTMAP3-201ENST00000447474 330 ntBASIC5.04□□□□□ -1.6
PCDHB11Q9Y5F2 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC5.04□□□□□ -1.6
PCDHB11Q9Y5F2 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.04□□□□□ -1.6
PCDHB11Q9Y5F2 AP001324.2-201ENST00000461163 319 ntBASIC5.04□□□□□ -1.6
PCDHB11Q9Y5F2 AC010285.1-201ENST00000470580 392 ntBASIC5.04□□□□□ -1.6
PCDHB11Q9Y5F2 RPL26P26-201ENST00000480251 434 ntBASIC5.04□□□□□ -1.6
PCDHB11Q9Y5F2 MRPS18CP4-201ENST00000535821 231 ntBASIC5.04□□□□□ -1.6
PCDHB11Q9Y5F2 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.04□□□□□ -1.6
PCDHB11Q9Y5F2 AC008785.1-201ENST00000624475 456 ntBASIC5.04□□□□□ -1.6
PCDHB11Q9Y5F2 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
PCDHB11Q9Y5F2 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
PCDHB11Q9Y5F2 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PCDHB11Q9Y5F2 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
PCDHB11Q9Y5F2 AC104623.2-202ENST00000623477 4002 ntBASIC5.04□□□□□ -1.6
PCDHB11Q9Y5F2 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PCDHB11Q9Y5F2 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
PCDHB11Q9Y5F2 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
PCDHB11Q9Y5F2 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
PCDHB11Q9Y5F2 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.03□□□□□ -1.6
PCDHB11Q9Y5F2 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC5.03□□□□□ -1.6
PCDHB11Q9Y5F2 MAPK10-304ENST00000641341 3984 ntBASIC5.03□□□□□ -1.6
PCDHB11Q9Y5F2 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PCDHB11Q9Y5F2 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
PCDHB11Q9Y5F2 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
PCDHB11Q9Y5F2 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC5.03□□□□□ -1.6
PCDHB11Q9Y5F2 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PCDHB11Q9Y5F2 RN7SKP224-201ENST00000364140 325 ntBASIC5.03□□□□□ -1.6
PCDHB11Q9Y5F2 SNORD50B-201ENST00000364995 70 ntBASIC5.03□□□□□ -1.6
PCDHB11Q9Y5F2 RNU6-1035P-201ENST00000384477 107 ntBASIC5.03□□□□□ -1.6
PCDHB11Q9Y5F2 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
PCDHB11Q9Y5F2 DDX39BP1-205ENST00000422507 192 ntBASIC5.03□□□□□ -1.6
PCDHB11Q9Y5F2 AC245028.1-201ENST00000423259 256 ntBASIC5.03□□□□□ -1.6
PCDHB11Q9Y5F2 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC5.03□□□□□ -1.6
PCDHB11Q9Y5F2 AC096638.1-201ENST00000444678 216 ntBASIC5.03□□□□□ -1.6
PCDHB11Q9Y5F2 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC5.03□□□□□ -1.6
PCDHB11Q9Y5F2 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC5.03□□□□□ -1.6
PCDHB11Q9Y5F2 RN7SKP49-201ENST00000516675 260 ntBASIC5.03□□□□□ -1.6
PCDHB11Q9Y5F2 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.03□□□□□ -1.6
PCDHB11Q9Y5F2 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PCDHB11Q9Y5F2 RN7SL52P-201ENST00000584271 284 ntBASIC5.03□□□□□ -1.6
PCDHB11Q9Y5F2 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC5.03□□□□□ -1.6
PCDHB11Q9Y5F2 AP002826.1-201ENST00000608835 315 ntBASIC5.03□□□□□ -1.6
PCDHB11Q9Y5F2 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC5.03□□□□□ -1.6
PCDHB11Q9Y5F2 RN7SL722P-201ENST00000617780 284 ntBASIC5.03□□□□□ -1.6
PCDHB11Q9Y5F2 RN7SL565P-201ENST00000618246 284 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms