Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 RPL39P28-201ENST00000465655 155 ntBASIC0.66□□□□□ -2.3
UBE2D4Q9Y2X8 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC0.66□□□□□ -2.3
UBE2D4Q9Y2X8 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC0.66□□□□□ -2.3
UBE2D4Q9Y2X8 AC005840.1-201ENST00000498412 377 ntBASIC0.66□□□□□ -2.3
UBE2D4Q9Y2X8 AC114786.4-201ENST00000508771 728 ntBASIC0.66□□□□□ -2.3
UBE2D4Q9Y2X8 AC114797.1-201ENST00000514003 728 ntBASIC0.66□□□□□ -2.3
UBE2D4Q9Y2X8 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC0.66□□□□□ -2.3
UBE2D4Q9Y2X8 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC0.66□□□□□ -2.3
UBE2D4Q9Y2X8 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC0.66□□□□□ -2.3
UBE2D4Q9Y2X8 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.66□□□□□ -2.3
UBE2D4Q9Y2X8 AC011611.5-201ENST00000552477 578 ntBASIC0.66□□□□□ -2.3
UBE2D4Q9Y2X8 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC0.66□□□□□ -2.3
UBE2D4Q9Y2X8 AC010615.3-201ENST00000597319 394 ntBASIC0.66□□□□□ -2.3
UBE2D4Q9Y2X8 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC0.66□□□□□ -2.3
UBE2D4Q9Y2X8 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC0.66□□□□□ -2.3
UBE2D4Q9Y2X8 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC0.66□□□□□ -2.3
UBE2D4Q9Y2X8 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC0.65□□□□□ -2.31
UBE2D4Q9Y2X8 SNORA70.7-201ENST00000384159 133 ntBASIC0.65□□□□□ -2.31
UBE2D4Q9Y2X8 RNA5SP465-201ENST00000391195 109 ntBASIC0.65□□□□□ -2.31
UBE2D4Q9Y2X8 U6atac.2-201ENST00000408644 118 ntBASIC0.65□□□□□ -2.31
UBE2D4Q9Y2X8 RNU6-321P-201ENST00000410912 106 ntBASIC0.65□□□□□ -2.31
UBE2D4Q9Y2X8 RPL30P4-201ENST00000429309 333 ntBASIC0.65□□□□□ -2.31
UBE2D4Q9Y2X8 AL603825.1-201ENST00000438481 80 ntBASIC0.65□□□□□ -2.31
UBE2D4Q9Y2X8 AC009238.1-201ENST00000442165 424 ntBASIC0.65□□□□□ -2.31
UBE2D4Q9Y2X8 AC009237.6-201ENST00000446969 424 ntBASIC0.65□□□□□ -2.31
UBE2D4Q9Y2X8 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.65□□□□□ -2.31
UBE2D4Q9Y2X8 RNU6-775P-201ENST00000459318 96 ntBASIC0.65□□□□□ -2.31
UBE2D4Q9Y2X8 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC0.65□□□□□ -2.31
UBE2D4Q9Y2X8 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC0.65□□□□□ -2.31
UBE2D4Q9Y2X8 AC034114.1-201ENST00000520293 285 ntBASIC0.65□□□□□ -2.31
UBE2D4Q9Y2X8 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
UBE2D4Q9Y2X8 HAUS1P3-201ENST00000523909 662 ntBASIC0.65□□□□□ -2.31
UBE2D4Q9Y2X8 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC0.65□□□□□ -2.31
UBE2D4Q9Y2X8 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC0.65□□□□□ -2.31
UBE2D4Q9Y2X8 AL049870.4-201ENST00000555741 486 ntBASIC0.65□□□□□ -2.31
UBE2D4Q9Y2X8 MIR4422-201ENST00000581938 83 ntBASIC0.65□□□□□ -2.31
UBE2D4Q9Y2X8 HMGN2P15-201ENST00000585707 270 ntBASIC0.65□□□□□ -2.31
UBE2D4Q9Y2X8 AP003973.1-201ENST00000604639 691 ntBASIC0.65□□□□□ -2.31
UBE2D4Q9Y2X8 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.65□□□□□ -2.31
UBE2D4Q9Y2X8 AC073968.1-201ENST00000618594 637 ntBASIC0.65□□□□□ -2.31
UBE2D4Q9Y2X8 AP003485.1-201ENST00000625093 753 ntBASIC0.65□□□□□ -2.31
UBE2D4Q9Y2X8 AC005832.2-201ENST00000538921 1430 ntBASIC0.64□□□□□ -2.31
UBE2D4Q9Y2X8 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.64□□□□□ -2.31
UBE2D4Q9Y2X8 DEFB108F-201ENST00000344638 222 ntBASIC0.64□□□□□ -2.31
UBE2D4Q9Y2X8 RNU6-750P-201ENST00000390946 107 ntBASIC0.64□□□□□ -2.31
UBE2D4Q9Y2X8 RNU1-78P-201ENST00000391248 165 ntBASIC0.64□□□□□ -2.31
UBE2D4Q9Y2X8 VTA1P1-201ENST00000414044 866 ntBASIC0.64□□□□□ -2.31
UBE2D4Q9Y2X8 OFD1P12Y-201ENST00000427963 1207 ntBASIC0.64□□□□□ -2.31
UBE2D4Q9Y2X8 OFD1P13Y-201ENST00000431179 1232 ntBASIC0.64□□□□□ -2.31
UBE2D4Q9Y2X8 AL365400.1-201ENST00000431854 640 ntBASIC0.64□□□□□ -2.31
UBE2D4Q9Y2X8 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC0.64□□□□□ -2.31
UBE2D4Q9Y2X8 AL354941.1-201ENST00000438600 464 ntBASIC0.64□□□□□ -2.31
UBE2D4Q9Y2X8 CR769776.1-201ENST00000441254 787 ntBASIC0.64□□□□□ -2.31
UBE2D4Q9Y2X8 BMI1P1-201ENST00000445879 941 ntBASIC0.64□□□□□ -2.31
UBE2D4Q9Y2X8 AC104629.2-201ENST00000468627 598 ntBASIC0.64□□□□□ -2.31
UBE2D4Q9Y2X8 COX6CP14-201ENST00000469580 174 ntBASIC0.64□□□□□ -2.31
UBE2D4Q9Y2X8 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC0.64□□□□□ -2.31
UBE2D4Q9Y2X8 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC0.64□□□□□ -2.31
UBE2D4Q9Y2X8 DEFB108D-201ENST00000527787 222 ntBASIC0.64□□□□□ -2.31
UBE2D4Q9Y2X8 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC0.64□□□□□ -2.31
UBE2D4Q9Y2X8 AC135279.1-201ENST00000543493 504 ntBASIC0.64□□□□□ -2.31
UBE2D4Q9Y2X8 AC023825.1-201ENST00000566704 1030 ntBASIC0.64□□□□□ -2.31
UBE2D4Q9Y2X8 MIR3921-201ENST00000577308 85 ntBASIC0.64□□□□□ -2.31
UBE2D4Q9Y2X8 AC105245.1-201ENST00000581934 244 ntBASIC0.64□□□□□ -2.31
UBE2D4Q9Y2X8 MIR4781-201ENST00000585250 76 ntBASIC0.64□□□□□ -2.31
UBE2D4Q9Y2X8 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC0.64□□□□□ -2.31
UBE2D4Q9Y2X8 AL355802.3-201ENST00000607571 545 ntBASIC0.64□□□□□ -2.31
UBE2D4Q9Y2X8 AC110792.4-201ENST00000609843 298 ntBASIC0.64□□□□□ -2.31
UBE2D4Q9Y2X8 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC0.64□□□□□ -2.31
UBE2D4Q9Y2X8 AC233981.2-201ENST00000611524 1614 ntBASIC0.64□□□□□ -2.31
UBE2D4Q9Y2X8 SUCLA2P2-201ENST00000417269 1309 ntBASIC0.64□□□□□ -2.31
UBE2D4Q9Y2X8 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC0.63□□□□□ -2.31
UBE2D4Q9Y2X8 TAF9BP2-201ENST00000400856 499 ntBASIC0.63□□□□□ -2.31
UBE2D4Q9Y2X8 RPS15AP12-201ENST00000419498 388 ntBASIC0.63□□□□□ -2.31
UBE2D4Q9Y2X8 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC0.63□□□□□ -2.31
UBE2D4Q9Y2X8 ISCA1P6-201ENST00000427740 390 ntBASIC0.63□□□□□ -2.31
UBE2D4Q9Y2X8 Z82205.1-201ENST00000428456 297 ntBASIC0.63□□□□□ -2.31
UBE2D4Q9Y2X8 FO393414.1-201ENST00000428697 1184 ntBASIC0.63□□□□□ -2.31
UBE2D4Q9Y2X8 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC0.63□□□□□ -2.31
UBE2D4Q9Y2X8 AL512844.2-201ENST00000433990 593 ntBASIC0.63□□□□□ -2.31
UBE2D4Q9Y2X8 ZNF736P11Y-201ENST00000442535 1213 ntBASIC0.63□□□□□ -2.31
UBE2D4Q9Y2X8 AC244505.5-201ENST00000443639 207 ntBASIC0.63□□□□□ -2.31
UBE2D4Q9Y2X8 AC021382.1-201ENST00000483523 359 ntBASIC0.63□□□□□ -2.31
UBE2D4Q9Y2X8 HMGN1P7-201ENST00000491722 313 ntBASIC0.63□□□□□ -2.31
UBE2D4Q9Y2X8 SSR3-208ENST00000496050 579 ntTSL 4 BASIC0.63□□□□□ -2.31
UBE2D4Q9Y2X8 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC0.63□□□□□ -2.31
UBE2D4Q9Y2X8 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC0.63□□□□□ -2.31
UBE2D4Q9Y2X8 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC0.63□□□□□ -2.31
UBE2D4Q9Y2X8 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.63□□□□□ -2.31
UBE2D4Q9Y2X8 AC093677.1-201ENST00000514414 678 ntBASIC0.63□□□□□ -2.31
UBE2D4Q9Y2X8 Y_RNA.676-201ENST00000516393 96 ntBASIC0.63□□□□□ -2.31
UBE2D4Q9Y2X8 AP002748.2-201ENST00000528671 348 ntBASIC0.63□□□□□ -2.31
UBE2D4Q9Y2X8 OR8K4P-201ENST00000534608 872 ntBASIC0.63□□□□□ -2.31
UBE2D4Q9Y2X8 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC0.63□□□□□ -2.31
UBE2D4Q9Y2X8 AL391261.3-201ENST00000557194 520 ntBASIC0.63□□□□□ -2.31
UBE2D4Q9Y2X8 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC0.63□□□□□ -2.31
UBE2D4Q9Y2X8 AC079148.1-201ENST00000565944 819 ntBASIC0.63□□□□□ -2.31
UBE2D4Q9Y2X8 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC0.63□□□□□ -2.31
UBE2D4Q9Y2X8 MTCYBP22-201ENST00000603788 447 ntBASIC0.63□□□□□ -2.31
UBE2D4Q9Y2X8 AL138963.2-201ENST00000605137 226 ntBASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms