Protein–RNA interactions for Protein: Q9Y239

NOD1, Nucleotide-binding oligomerization domain-containing protein 1, humanhuman

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1Q9Y239 Y_RNA.561-201ENST00000384694 100 ntBASIC5.21□□□□□ -1.58
NOD1Q9Y239 MIR34A-201ENST00000385130 110 ntBASIC5.21□□□□□ -1.58
NOD1Q9Y239 SNORA40C-201ENST00000391285 128 ntBASIC5.21□□□□□ -1.58
NOD1Q9Y239 RNU2-14P-201ENST00000411053 191 ntBASIC5.21□□□□□ -1.58
NOD1Q9Y239 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
NOD1Q9Y239 AC007560.1-201ENST00000426912 237 ntBASIC5.21□□□□□ -1.58
NOD1Q9Y239 AL356867.1-201ENST00000429623 299 ntBASIC5.21□□□□□ -1.58
NOD1Q9Y239 AL356981.1-201ENST00000454879 684 ntBASIC5.21□□□□□ -1.58
NOD1Q9Y239 RPL23AP24-201ENST00000458203 385 ntBASIC5.21□□□□□ -1.58
NOD1Q9Y239 RPS29P27-201ENST00000463711 170 ntBASIC5.21□□□□□ -1.58
NOD1Q9Y239 RNU6-377P-201ENST00000515965 102 ntBASIC5.21□□□□□ -1.58
NOD1Q9Y239 SNORA31.6-201ENST00000516241 130 ntBASIC5.21□□□□□ -1.58
NOD1Q9Y239 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC5.21□□□□□ -1.58
NOD1Q9Y239 AC093023.1-201ENST00000547375 507 ntBASIC5.21□□□□□ -1.58
NOD1Q9Y239 AC130289.1-201ENST00000577321 73 ntBASIC5.21□□□□□ -1.58
NOD1Q9Y239 AC006272.2-201ENST00000594725 163 ntBASIC5.21□□□□□ -1.58
NOD1Q9Y239 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC5.21□□□□□ -1.58
NOD1Q9Y239 AC091979.2-201ENST00000607514 214 ntBASIC5.21□□□□□ -1.58
NOD1Q9Y239 AC005046.1-201ENST00000608515 625 ntBASIC5.21□□□□□ -1.58
NOD1Q9Y239 MIR376A1-201ENST00000616574 68 ntBASIC5.21□□□□□ -1.58
NOD1Q9Y239 AC131238.1-201ENST00000617135 328 ntBASIC5.21□□□□□ -1.58
NOD1Q9Y239 AC090617.7-201ENST00000623952 126 ntBASIC5.21□□□□□ -1.58
NOD1Q9Y239 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC5.21□□□□□ -1.58
NOD1Q9Y239 U3.53-201ENST00000628922 216 ntBASIC5.21□□□□□ -1.58
NOD1Q9Y239 U6.92-201ENST00000636464 89 ntBASIC5.21□□□□□ -1.58
NOD1Q9Y239 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
NOD1Q9Y239 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
NOD1Q9Y239 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.21□□□□□ -1.58
NOD1Q9Y239 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.21□□□□□ -1.58
NOD1Q9Y239 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
NOD1Q9Y239 RAD17P1-201ENST00000418130 2042 ntBASIC5.21□□□□□ -1.58
NOD1Q9Y239 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.21□□□□□ -1.58
NOD1Q9Y239 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
NOD1Q9Y239 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
NOD1Q9Y239 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
NOD1Q9Y239 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
NOD1Q9Y239 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
NOD1Q9Y239 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
NOD1Q9Y239 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
NOD1Q9Y239 RNU6-227P-201ENST00000362865 103 ntBASIC5.2□□□□□ -1.58
NOD1Q9Y239 MIR124-3-201ENST00000384866 87 ntBASIC5.2□□□□□ -1.58
NOD1Q9Y239 RPL21P75-201ENST00000396599 483 ntBASIC5.2□□□□□ -1.58
NOD1Q9Y239 RPL21P28-201ENST00000401418 483 ntBASIC5.2□□□□□ -1.58
NOD1Q9Y239 RNA5SP36-201ENST00000410197 133 ntBASIC5.2□□□□□ -1.58
NOD1Q9Y239 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC5.2□□□□□ -1.58
NOD1Q9Y239 AL590556.1-201ENST00000423231 483 ntBASIC5.2□□□□□ -1.58
NOD1Q9Y239 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.2□□□□□ -1.58
NOD1Q9Y239 RPL23AP22-201ENST00000437556 453 ntBASIC5.2□□□□□ -1.58
NOD1Q9Y239 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC5.2□□□□□ -1.58
NOD1Q9Y239 RPL21P11-201ENST00000461458 483 ntBASIC5.2□□□□□ -1.58
NOD1Q9Y239 RPL21P39-201ENST00000463605 483 ntBASIC5.2□□□□□ -1.58
NOD1Q9Y239 AC034236.1-201ENST00000469891 373 ntBASIC5.2□□□□□ -1.58
NOD1Q9Y239 AC132942.1-201ENST00000486753 483 ntBASIC5.2□□□□□ -1.58
NOD1Q9Y239 AC093591.1-201ENST00000491435 481 ntBASIC5.2□□□□□ -1.58
NOD1Q9Y239 AC139453.3-201ENST00000493276 369 ntBASIC5.2□□□□□ -1.58
NOD1Q9Y239 RPL21P16-201ENST00000495531 483 ntBASIC5.2□□□□□ -1.58
NOD1Q9Y239 RNU5B-3P-201ENST00000516601 115 ntBASIC5.2□□□□□ -1.58
NOD1Q9Y239 IGLVIV-65-201ENST00000517313 360 ntBASIC5.2□□□□□ -1.58
NOD1Q9Y239 AC004024.1-201ENST00000549244 247 ntBASIC5.2□□□□□ -1.58
NOD1Q9Y239 SYF2P1-201ENST00000550658 413 ntBASIC5.2□□□□□ -1.58
NOD1Q9Y239 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC5.2□□□□□ -1.58
NOD1Q9Y239 AC005476.1-201ENST00000554427 397 ntBASIC5.2□□□□□ -1.58
NOD1Q9Y239 AC093249.4-201ENST00000564755 259 ntBASIC5.2□□□□□ -1.58
NOD1Q9Y239 AC104581.2-201ENST00000572227 430 ntBASIC5.2□□□□□ -1.58
NOD1Q9Y239 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC5.2□□□□□ -1.58
NOD1Q9Y239 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC5.2□□□□□ -1.58
NOD1Q9Y239 MIR3939-201ENST00000582614 106 ntBASIC5.2□□□□□ -1.58
NOD1Q9Y239 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.2□□□□□ -1.58
NOD1Q9Y239 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC5.2□□□□□ -1.58
NOD1Q9Y239 AC023043.4-201ENST00000612081 449 ntBASIC5.2□□□□□ -1.58
NOD1Q9Y239 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC5.2□□□□□ -1.58
NOD1Q9Y239 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
NOD1Q9Y239 AC004817.4-201ENST00000602396 3625 ntBASIC5.2□□□□□ -1.58
NOD1Q9Y239 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
NOD1Q9Y239 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.2□□□□□ -1.58
NOD1Q9Y239 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
NOD1Q9Y239 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
NOD1Q9Y239 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
NOD1Q9Y239 AC093671.1-201ENST00000624981 2929 ntBASIC5.19□□□□□ -1.58
NOD1Q9Y239 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
NOD1Q9Y239 Y_RNA.54-201ENST00000362766 105 ntBASIC5.19□□□□□ -1.58
NOD1Q9Y239 Y_RNA.65-201ENST00000362846 100 ntBASIC5.19□□□□□ -1.58
NOD1Q9Y239 Y_RNA.123-201ENST00000363338 102 ntBASIC5.19□□□□□ -1.58
NOD1Q9Y239 RNU6-280P-201ENST00000364145 104 ntBASIC5.19□□□□□ -1.58
NOD1Q9Y239 Y_RNA.352-201ENST00000365439 102 ntBASIC5.19□□□□□ -1.58
NOD1Q9Y239 RNU6-166P-201ENST00000384371 107 ntBASIC5.19□□□□□ -1.58
NOD1Q9Y239 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.19□□□□□ -1.58
NOD1Q9Y239 SNORD115-46-201ENST00000390982 71 ntBASIC5.19□□□□□ -1.58
NOD1Q9Y239 AL603910.2-201ENST00000407268 136 ntBASIC5.19□□□□□ -1.58
NOD1Q9Y239 NDUFB4P7-201ENST00000423198 363 ntBASIC5.19□□□□□ -1.58
NOD1Q9Y239 AL645608.4-201ENST00000423619 154 ntBASIC5.19□□□□□ -1.58
NOD1Q9Y239 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC5.19□□□□□ -1.58
NOD1Q9Y239 NUTF2P7-201ENST00000453086 375 ntBASIC5.19□□□□□ -1.58
NOD1Q9Y239 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC5.19□□□□□ -1.58
NOD1Q9Y239 Y_RNA.706-201ENST00000516933 99 ntBASIC5.19□□□□□ -1.58
NOD1Q9Y239 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC5.19□□□□□ -1.58
NOD1Q9Y239 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.19□□□□□ -1.58
NOD1Q9Y239 AC006349.1-201ENST00000555526 235 ntBASIC5.19□□□□□ -1.58
NOD1Q9Y239 AC011944.2-201ENST00000624440 683 ntBASIC5.19□□□□□ -1.58
NOD1Q9Y239 FTO-223ENST00000640179 210 ntTSL 5 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms