Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 MIR412-201ENST00000362142 91 ntBASIC3.84□□□□□ -1.79
CDC42EP3Q9UKI2 Y_RNA.39-201ENST00000362620 98 ntBASIC3.84□□□□□ -1.79
CDC42EP3Q9UKI2 Y_RNA.380-201ENST00000365663 111 ntBASIC3.84□□□□□ -1.79
CDC42EP3Q9UKI2 Y_RNA.485-201ENST00000384395 102 ntBASIC3.84□□□□□ -1.79
CDC42EP3Q9UKI2 Y_RNA.556-201ENST00000384677 113 ntBASIC3.84□□□□□ -1.79
CDC42EP3Q9UKI2 Y_RNA.577-201ENST00000384794 101 ntBASIC3.84□□□□□ -1.79
CDC42EP3Q9UKI2 RNU6-1109P-201ENST00000391187 107 ntBASIC3.84□□□□□ -1.79
CDC42EP3Q9UKI2 AL138885.1-201ENST00000405921 675 ntBASIC3.84□□□□□ -1.79
CDC42EP3Q9UKI2 RNU6-325P-201ENST00000411132 105 ntBASIC3.84□□□□□ -1.79
CDC42EP3Q9UKI2 AL592148.1-201ENST00000413568 445 ntBASIC3.84□□□□□ -1.79
CDC42EP3Q9UKI2 CBX3P6-201ENST00000430257 527 ntBASIC3.84□□□□□ -1.79
CDC42EP3Q9UKI2 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.84□□□□□ -1.79
CDC42EP3Q9UKI2 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.84□□□□□ -1.79
CDC42EP3Q9UKI2 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.84□□□□□ -1.79
CDC42EP3Q9UKI2 RN7SL517P-201ENST00000462240 305 ntBASIC3.84□□□□□ -1.79
CDC42EP3Q9UKI2 AC010655.3-201ENST00000478818 450 ntBASIC3.84□□□□□ -1.79
CDC42EP3Q9UKI2 AC025445.1-201ENST00000502728 300 ntBASIC3.84□□□□□ -1.79
CDC42EP3Q9UKI2 ATP6V1G1P6-201ENST00000504007 334 ntBASIC3.84□□□□□ -1.79
CDC42EP3Q9UKI2 AC020593.1-201ENST00000507399 299 ntBASIC3.84□□□□□ -1.79
CDC42EP3Q9UKI2 MRPS35P2-201ENST00000508242 191 ntBASIC3.84□□□□□ -1.79
CDC42EP3Q9UKI2 AC017037.1-201ENST00000508460 471 ntBASIC3.84□□□□□ -1.79
CDC42EP3Q9UKI2 RNU6-635P-201ENST00000516651 102 ntBASIC3.84□□□□□ -1.79
CDC42EP3Q9UKI2 AC022616.4-201ENST00000522985 181 ntBASIC3.84□□□□□ -1.79
CDC42EP3Q9UKI2 AC004024.1-201ENST00000549244 247 ntBASIC3.84□□□□□ -1.79
CDC42EP3Q9UKI2 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.84□□□□□ -1.79
CDC42EP3Q9UKI2 AL355297.3-201ENST00000604082 446 ntBASIC3.84□□□□□ -1.79
CDC42EP3Q9UKI2 AP000787.2-201ENST00000604432 568 ntBASIC3.84□□□□□ -1.79
CDC42EP3Q9UKI2 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.84□□□□□ -1.79
CDC42EP3Q9UKI2 AL021879.1-201ENST00000611756 288 ntBASIC3.84□□□□□ -1.79
CDC42EP3Q9UKI2 AL355810.1-201ENST00000614629 552 ntBASIC3.84□□□□□ -1.79
CDC42EP3Q9UKI2 AC090132.2-201ENST00000615881 347 ntBASIC3.84□□□□□ -1.79
CDC42EP3Q9UKI2 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CDC42EP3Q9UKI2 AC007792.1-201ENST00000623023 402 ntBASIC3.84□□□□□ -1.79
CDC42EP3Q9UKI2 RNF123-214ENST00000629802 207 ntTSL 5 BASIC3.84□□□□□ -1.79
CDC42EP3Q9UKI2 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.84□□□□□ -1.79
CDC42EP3Q9UKI2 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
CDC42EP3Q9UKI2 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CDC42EP3Q9UKI2 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.8
CDC42EP3Q9UKI2 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
CDC42EP3Q9UKI2 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.8
CDC42EP3Q9UKI2 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.8
CDC42EP3Q9UKI2 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
CDC42EP3Q9UKI2 CDC27P3-201ENST00000635418 1910 ntBASIC3.83□□□□□ -1.8
CDC42EP3Q9UKI2 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC3.83□□□□□ -1.8
CDC42EP3Q9UKI2 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.83□□□□□ -1.8
CDC42EP3Q9UKI2 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.83□□□□□ -1.8
CDC42EP3Q9UKI2 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
CDC42EP3Q9UKI2 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
CDC42EP3Q9UKI2 SNORA62.3-201ENST00000365110 153 ntBASIC3.83□□□□□ -1.8
CDC42EP3Q9UKI2 RNU6-1318P-201ENST00000365389 103 ntBASIC3.83□□□□□ -1.8
CDC42EP3Q9UKI2 RHOT1P2-201ENST00000366423 333 ntBASIC3.83□□□□□ -1.8
CDC42EP3Q9UKI2 RNU6-101P-201ENST00000410323 104 ntBASIC3.83□□□□□ -1.8
CDC42EP3Q9UKI2 RNU6-1025P-201ENST00000410629 104 ntBASIC3.83□□□□□ -1.8
CDC42EP3Q9UKI2 DPH3P2-201ENST00000422618 250 ntBASIC3.83□□□□□ -1.8
CDC42EP3Q9UKI2 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.83□□□□□ -1.8
CDC42EP3Q9UKI2 HMGN2P21-201ENST00000447764 270 ntBASIC3.83□□□□□ -1.8
CDC42EP3Q9UKI2 AL353752.1-201ENST00000454946 260 ntBASIC3.83□□□□□ -1.8
CDC42EP3Q9UKI2 RPL21P13-201ENST00000488305 481 ntBASIC3.83□□□□□ -1.8
CDC42EP3Q9UKI2 AL160314.1-201ENST00000490836 438 ntBASIC3.83□□□□□ -1.8
CDC42EP3Q9UKI2 AC091167.1-201ENST00000492017 396 ntBASIC3.83□□□□□ -1.8
CDC42EP3Q9UKI2 RN7SL558P-201ENST00000497468 299 ntBASIC3.83□□□□□ -1.8
CDC42EP3Q9UKI2 AL359273.1-201ENST00000510918 627 ntBASIC3.83□□□□□ -1.8
CDC42EP3Q9UKI2 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC3.83□□□□□ -1.8
CDC42EP3Q9UKI2 AC009812.2-201ENST00000517657 457 ntBASIC3.83□□□□□ -1.8
CDC42EP3Q9UKI2 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC3.83□□□□□ -1.8
CDC42EP3Q9UKI2 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.83□□□□□ -1.8
CDC42EP3Q9UKI2 AP000889.1-201ENST00000530968 660 ntBASIC3.83□□□□□ -1.8
CDC42EP3Q9UKI2 MIR3138-201ENST00000585238 82 ntBASIC3.83□□□□□ -1.8
CDC42EP3Q9UKI2 AL355598.1-201ENST00000604169 202 ntBASIC3.83□□□□□ -1.8
CDC42EP3Q9UKI2 AC124312.5-201ENST00000604451 268 ntBASIC3.83□□□□□ -1.8
CDC42EP3Q9UKI2 AL121917.1-203ENST00000605534 577 ntBASIC3.83□□□□□ -1.8
CDC42EP3Q9UKI2 AC114781.5-201ENST00000615297 108 ntBASIC3.83□□□□□ -1.8
CDC42EP3Q9UKI2 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.83□□□□□ -1.8
CDC42EP3Q9UKI2 U3.53-201ENST00000628922 216 ntBASIC3.83□□□□□ -1.8
CDC42EP3Q9UKI2 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.83□□□□□ -1.8
CDC42EP3Q9UKI2 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.83□□□□□ -1.8
CDC42EP3Q9UKI2 AL445487.1-201ENST00000415694 1580 ntBASIC3.83□□□□□ -1.8
CDC42EP3Q9UKI2 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
CDC42EP3Q9UKI2 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CDC42EP3Q9UKI2 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CDC42EP3Q9UKI2 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC3.83□□□□□ -1.8
CDC42EP3Q9UKI2 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
CDC42EP3Q9UKI2 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CDC42EP3Q9UKI2 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
CDC42EP3Q9UKI2 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC3.83□□□□□ -1.8
CDC42EP3Q9UKI2 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
CDC42EP3Q9UKI2 AL136964.1-201ENST00000622038 2990 ntBASIC3.82□□□□□ -1.8
CDC42EP3Q9UKI2 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CDC42EP3Q9UKI2 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CDC42EP3Q9UKI2 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.82□□□□□ -1.8
CDC42EP3Q9UKI2 Y_RNA.106-201ENST00000363189 100 ntBASIC3.82□□□□□ -1.8
CDC42EP3Q9UKI2 RNU6-26P-201ENST00000383985 107 ntBASIC3.82□□□□□ -1.8
CDC42EP3Q9UKI2 SNORD96B-201ENST00000386148 79 ntBASIC3.82□□□□□ -1.8
CDC42EP3Q9UKI2 RNU1-82P-201ENST00000390851 165 ntBASIC3.82□□□□□ -1.8
CDC42EP3Q9UKI2 SDHCP2-201ENST00000398565 501 ntBASIC3.82□□□□□ -1.8
CDC42EP3Q9UKI2 MIR1290-201ENST00000408735 78 ntBASIC3.82□□□□□ -1.8
CDC42EP3Q9UKI2 RNU6-628P-201ENST00000410675 107 ntBASIC3.82□□□□□ -1.8
CDC42EP3Q9UKI2 RNA5SP104-201ENST00000410989 118 ntBASIC3.82□□□□□ -1.8
CDC42EP3Q9UKI2 EI24P1-201ENST00000416584 867 ntBASIC3.82□□□□□ -1.8
CDC42EP3Q9UKI2 AC108032.1-201ENST00000416706 207 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms