Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 PIGFP3-201ENST00000441918 722 ntBASIC5.2□□□□□ -1.58
NUCKS1Q9H1E3 AL031659.1-201ENST00000447075 539 ntBASIC5.2□□□□□ -1.58
NUCKS1Q9H1E3 RPL10P17-201ENST00000453852 316 ntBASIC5.2□□□□□ -1.58
NUCKS1Q9H1E3 RPS27AP13-201ENST00000498403 237 ntBASIC5.2□□□□□ -1.58
NUCKS1Q9H1E3 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.2□□□□□ -1.58
NUCKS1Q9H1E3 AL590705.4-201ENST00000532209 134 ntBASIC5.2□□□□□ -1.58
NUCKS1Q9H1E3 BDH2P1-201ENST00000602288 736 ntBASIC5.2□□□□□ -1.58
NUCKS1Q9H1E3 AC009318.2-201ENST00000610917 651 ntBASIC5.2□□□□□ -1.58
NUCKS1Q9H1E3 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
NUCKS1Q9H1E3 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
NUCKS1Q9H1E3 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
NUCKS1Q9H1E3 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
NUCKS1Q9H1E3 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
NUCKS1Q9H1E3 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
NUCKS1Q9H1E3 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
NUCKS1Q9H1E3 STK31-205ENST00000433467 3085 ntTSL 2 BASIC5.2□□□□□ -1.58
NUCKS1Q9H1E3 AC008725.1-201ENST00000605123 2263 ntBASIC5.2□□□□□ -1.58
NUCKS1Q9H1E3 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
NUCKS1Q9H1E3 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
NUCKS1Q9H1E3 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
NUCKS1Q9H1E3 RNU6-989P-201ENST00000362756 107 ntBASIC5.19□□□□□ -1.58
NUCKS1Q9H1E3 SNORA22C-201ENST00000384614 134 ntBASIC5.19□□□□□ -1.58
NUCKS1Q9H1E3 SNORA53-201ENST00000391141 249 ntBASIC5.19□□□□□ -1.58
NUCKS1Q9H1E3 BMS1P22-201ENST00000414726 313 ntBASIC5.19□□□□□ -1.58
NUCKS1Q9H1E3 RANP8-201ENST00000444720 713 ntBASIC5.19□□□□□ -1.58
NUCKS1Q9H1E3 TDGF1P1-201ENST00000445734 527 ntBASIC5.19□□□□□ -1.58
NUCKS1Q9H1E3 PRDX3P3-201ENST00000447765 522 ntBASIC5.19□□□□□ -1.58
NUCKS1Q9H1E3 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
NUCKS1Q9H1E3 RPL23AP65-201ENST00000475608 468 ntBASIC5.19□□□□□ -1.58
NUCKS1Q9H1E3 AC140172.1-201ENST00000502928 141 ntBASIC5.19□□□□□ -1.58
NUCKS1Q9H1E3 MRPS33P2-201ENST00000507850 322 ntBASIC5.19□□□□□ -1.58
NUCKS1Q9H1E3 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.19□□□□□ -1.58
NUCKS1Q9H1E3 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC5.19□□□□□ -1.58
NUCKS1Q9H1E3 AP006245.1-201ENST00000522549 120 ntBASIC5.19□□□□□ -1.58
NUCKS1Q9H1E3 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.19□□□□□ -1.58
NUCKS1Q9H1E3 AC023824.2-201ENST00000566185 400 ntBASIC5.19□□□□□ -1.58
NUCKS1Q9H1E3 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.19□□□□□ -1.58
NUCKS1Q9H1E3 AL162424.1-201ENST00000602325 221 ntBASIC5.19□□□□□ -1.58
NUCKS1Q9H1E3 AC009314.1-201ENST00000603871 304 ntBASIC5.19□□□□□ -1.58
NUCKS1Q9H1E3 AC011921.3-201ENST00000605540 361 ntBASIC5.19□□□□□ -1.58
NUCKS1Q9H1E3 MIR8076-201ENST00000611401 83 ntBASIC5.19□□□□□ -1.58
NUCKS1Q9H1E3 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
NUCKS1Q9H1E3 AC240442.1-201ENST00000616055 283 ntBASIC5.19□□□□□ -1.58
NUCKS1Q9H1E3 AC140113.4-201ENST00000622087 222 ntBASIC5.19□□□□□ -1.58
NUCKS1Q9H1E3 MIR6730-201ENST00000622213 67 ntBASIC5.19□□□□□ -1.58
NUCKS1Q9H1E3 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC5.19□□□□□ -1.58
NUCKS1Q9H1E3 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
NUCKS1Q9H1E3 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC5.19□□□□□ -1.58
NUCKS1Q9H1E3 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.19□□□□□ -1.58
NUCKS1Q9H1E3 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
NUCKS1Q9H1E3 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.19□□□□□ -1.58
NUCKS1Q9H1E3 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
NUCKS1Q9H1E3 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.18□□□□□ -1.58
NUCKS1Q9H1E3 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC5.18□□□□□ -1.58
NUCKS1Q9H1E3 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC5.18□□□□□ -1.58
NUCKS1Q9H1E3 RNA5SP502-201ENST00000362694 119 ntBASIC5.18□□□□□ -1.58
NUCKS1Q9H1E3 RNU4-90P-201ENST00000362773 141 ntBASIC5.18□□□□□ -1.58
NUCKS1Q9H1E3 SNORD50.1-201ENST00000362987 71 ntBASIC5.18□□□□□ -1.58
NUCKS1Q9H1E3 Y_RNA.534-201ENST00000384599 112 ntBASIC5.18□□□□□ -1.58
NUCKS1Q9H1E3 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
NUCKS1Q9H1E3 MIR550A3-201ENST00000390735 95 ntBASIC5.18□□□□□ -1.58
NUCKS1Q9H1E3 RNU6-918P-201ENST00000391219 106 ntBASIC5.18□□□□□ -1.58
NUCKS1Q9H1E3 RNU6-1135P-201ENST00000411083 103 ntBASIC5.18□□□□□ -1.58
NUCKS1Q9H1E3 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.18□□□□□ -1.58
NUCKS1Q9H1E3 OR2AM1P-201ENST00000422137 422 ntBASIC5.18□□□□□ -1.58
NUCKS1Q9H1E3 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC5.18□□□□□ -1.58
NUCKS1Q9H1E3 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC5.18□□□□□ -1.58
NUCKS1Q9H1E3 RPL26P6-201ENST00000440913 438 ntBASIC5.18□□□□□ -1.58
NUCKS1Q9H1E3 HMGN1P11-201ENST00000508668 303 ntBASIC5.18□□□□□ -1.58
NUCKS1Q9H1E3 RNU1-86P-201ENST00000516108 154 ntBASIC5.18□□□□□ -1.58
NUCKS1Q9H1E3 RNU1-107P-201ENST00000516617 154 ntBASIC5.18□□□□□ -1.58
NUCKS1Q9H1E3 AC025755.1-201ENST00000521306 278 ntBASIC5.18□□□□□ -1.58
NUCKS1Q9H1E3 MDM2-232ENST00000544561 213 ntTSL 5 BASIC5.18□□□□□ -1.58
NUCKS1Q9H1E3 OR4H12P-201ENST00000556269 907 ntBASIC5.18□□□□□ -1.58
NUCKS1Q9H1E3 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.18□□□□□ -1.58
NUCKS1Q9H1E3 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC5.18□□□□□ -1.58
NUCKS1Q9H1E3 AL450472.3-201ENST00000615578 367 ntBASIC5.18□□□□□ -1.58
NUCKS1Q9H1E3 AC087385.3-201ENST00000620477 187 ntBASIC5.18□□□□□ -1.58
NUCKS1Q9H1E3 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
NUCKS1Q9H1E3 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC5.18□□□□□ -1.58
NUCKS1Q9H1E3 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
NUCKS1Q9H1E3 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
NUCKS1Q9H1E3 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
NUCKS1Q9H1E3 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.18□□□□□ -1.58
NUCKS1Q9H1E3 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
NUCKS1Q9H1E3 AC099654.2-201ENST00000433031 1980 ntBASIC5.17□□□□□ -1.58
NUCKS1Q9H1E3 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC5.17□□□□□ -1.58
NUCKS1Q9H1E3 RNU6-1179P-201ENST00000384667 107 ntBASIC5.17□□□□□ -1.58
NUCKS1Q9H1E3 RNU6-417P-201ENST00000384712 107 ntBASIC5.17□□□□□ -1.58
NUCKS1Q9H1E3 MIR135A2-201ENST00000384854 100 ntBASIC5.17□□□□□ -1.58
NUCKS1Q9H1E3 RNA5SP146-201ENST00000410743 123 ntBASIC5.17□□□□□ -1.58
NUCKS1Q9H1E3 RNU6-651P-201ENST00000411040 105 ntBASIC5.17□□□□□ -1.58
NUCKS1Q9H1E3 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC5.17□□□□□ -1.58
NUCKS1Q9H1E3 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC5.17□□□□□ -1.58
NUCKS1Q9H1E3 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC5.17□□□□□ -1.58
NUCKS1Q9H1E3 RN7SKP210-201ENST00000459176 261 ntBASIC5.17□□□□□ -1.58
NUCKS1Q9H1E3 RNU7-87P-201ENST00000459343 62 ntBASIC5.17□□□□□ -1.58
NUCKS1Q9H1E3 U8.21-201ENST00000459536 136 ntBASIC5.17□□□□□ -1.58
NUCKS1Q9H1E3 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC5.17□□□□□ -1.58
NUCKS1Q9H1E3 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms