Protein–RNA interactions for Protein: Q99567

NUP88, Nuclear pore complex protein Nup88, humanhuman

Predicted RBP Predictions only

Length 741 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88Q99567 AL161798.1-201ENST00000604630 131 ntBASIC4.02□□□□□ -1.77
NUP88Q99567 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.02□□□□□ -1.77
NUP88Q99567 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC4.02□□□□□ -1.77
NUP88Q99567 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC4.02□□□□□ -1.77
NUP88Q99567 Z99571.1-201ENST00000636677 394 ntBASIC4.02□□□□□ -1.77
NUP88Q99567 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
NUP88Q99567 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
NUP88Q99567 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
NUP88Q99567 AC090740.1-201ENST00000623193 2262 ntBASIC4.01□□□□□ -1.77
NUP88Q99567 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.01□□□□□ -1.77
NUP88Q99567 RNU4-66P-201ENST00000365199 138 ntBASIC4.01□□□□□ -1.77
NUP88Q99567 RNU6-1283P-201ENST00000365314 105 ntBASIC4.01□□□□□ -1.77
NUP88Q99567 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
NUP88Q99567 SNRPEP10-201ENST00000420249 274 ntBASIC4.01□□□□□ -1.77
NUP88Q99567 AC104058.1-201ENST00000448028 297 ntBASIC4.01□□□□□ -1.77
NUP88Q99567 AC069439.1-201ENST00000494739 167 ntBASIC4.01□□□□□ -1.77
NUP88Q99567 RNU6-914P-201ENST00000516749 109 ntBASIC4.01□□□□□ -1.77
NUP88Q99567 RNU6-685P-201ENST00000517088 95 ntBASIC4.01□□□□□ -1.77
NUP88Q99567 RN7SKP57-201ENST00000517248 293 ntBASIC4.01□□□□□ -1.77
NUP88Q99567 TRAV28-201ENST00000557548 323 ntBASIC4.01□□□□□ -1.77
NUP88Q99567 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC4.01□□□□□ -1.77
NUP88Q99567 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC4.01□□□□□ -1.77
NUP88Q99567 AC110741.2-201ENST00000605278 268 ntBASIC4.01□□□□□ -1.77
NUP88Q99567 MIR15A-201ENST00000607334 83 ntBASIC4.01□□□□□ -1.77
NUP88Q99567 AP001486.3-201ENST00000615334 372 ntBASIC4.01□□□□□ -1.77
NUP88Q99567 MIR7112-201ENST00000616126 65 ntBASIC4.01□□□□□ -1.77
NUP88Q99567 MTND1P37-201ENST00000636562 264 ntBASIC4.01□□□□□ -1.77
NUP88Q99567 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.01□□□□□ -1.77
NUP88Q99567 CUL1P1-201ENST00000509510 2425 ntBASIC4.01□□□□□ -1.77
NUP88Q99567 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
NUP88Q99567 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
NUP88Q99567 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
NUP88Q99567 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC4□□□□□ -1.77
NUP88Q99567 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
NUP88Q99567 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC4□□□□□ -1.77
NUP88Q99567 RPL7P26-201ENST00000333817 754 ntBASIC4□□□□□ -1.77
NUP88Q99567 RNU6-451P-201ENST00000362921 107 ntBASIC4□□□□□ -1.77
NUP88Q99567 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC4□□□□□ -1.77
NUP88Q99567 AL136116.1-201ENST00000403591 381 ntBASIC4□□□□□ -1.77
NUP88Q99567 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC4□□□□□ -1.77
NUP88Q99567 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC4□□□□□ -1.77
NUP88Q99567 Z82210.1-201ENST00000440037 231 ntBASIC4□□□□□ -1.77
NUP88Q99567 CALM1P1-201ENST00000442082 433 ntBASIC4□□□□□ -1.77
NUP88Q99567 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC4□□□□□ -1.77
NUP88Q99567 RN7SL594P-201ENST00000470590 287 ntBASIC4□□□□□ -1.77
NUP88Q99567 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC4□□□□□ -1.77
NUP88Q99567 NAF1-205ENST00000509434 385 ntTSL 3 BASIC4□□□□□ -1.77
NUP88Q99567 AC098591.2-201ENST00000510152 315 ntBASIC4□□□□□ -1.77
NUP88Q99567 AC025465.4-201ENST00000513422 638 ntBASIC4□□□□□ -1.77
NUP88Q99567 SUB1P1-201ENST00000524415 382 ntBASIC4□□□□□ -1.77
NUP88Q99567 AC022690.1-201ENST00000526681 550 ntBASIC4□□□□□ -1.77
NUP88Q99567 AP005435.4-201ENST00000529514 284 ntBASIC4□□□□□ -1.77
NUP88Q99567 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC4□□□□□ -1.77
NUP88Q99567 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC4□□□□□ -1.77
NUP88Q99567 AC010525.2-201ENST00000590920 195 ntBASIC4□□□□□ -1.77
NUP88Q99567 uc_338.34-201ENST00000617467 174 ntBASIC4□□□□□ -1.77
NUP88Q99567 U7.8-201ENST00000619968 63 ntBASIC4□□□□□ -1.77
NUP88Q99567 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC4□□□□□ -1.77
NUP88Q99567 AC009033.1-201ENST00000624279 431 ntBASIC4□□□□□ -1.77
NUP88Q99567 AC024614.3-201ENST00000637860 256 ntBASIC4□□□□□ -1.77
NUP88Q99567 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
NUP88Q99567 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4□□□□□ -1.77
NUP88Q99567 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4□□□□□ -1.77
NUP88Q99567 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
NUP88Q99567 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4□□□□□ -1.77
NUP88Q99567 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
NUP88Q99567 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
NUP88Q99567 OR4G1P-203ENST00000641984 1631 ntBASIC3.99□□□□□ -1.77
NUP88Q99567 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
NUP88Q99567 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
NUP88Q99567 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
NUP88Q99567 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
NUP88Q99567 RNU6-876P-201ENST00000391295 104 ntBASIC3.99□□□□□ -1.77
NUP88Q99567 AL139397.2-201ENST00000404529 772 ntBASIC3.99□□□□□ -1.77
NUP88Q99567 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.99□□□□□ -1.77
NUP88Q99567 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.99□□□□□ -1.77
NUP88Q99567 AL139413.1-201ENST00000421309 217 ntBASIC3.99□□□□□ -1.77
NUP88Q99567 AL160275.3-201ENST00000423876 471 ntBASIC3.99□□□□□ -1.77
NUP88Q99567 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.99□□□□□ -1.77
NUP88Q99567 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.99□□□□□ -1.77
NUP88Q99567 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.99□□□□□ -1.77
NUP88Q99567 SNRPGP3-201ENST00000469405 227 ntBASIC3.99□□□□□ -1.77
NUP88Q99567 AC116353.2-201ENST00000505332 712 ntBASIC3.99□□□□□ -1.77
NUP88Q99567 AP006245.1-201ENST00000522549 120 ntBASIC3.99□□□□□ -1.77
NUP88Q99567 MTND4P7-201ENST00000523876 130 ntBASIC3.99□□□□□ -1.77
NUP88Q99567 CASP1P1-201ENST00000526345 212 ntBASIC3.99□□□□□ -1.77
NUP88Q99567 MIR4644-201ENST00000579929 84 ntBASIC3.99□□□□□ -1.77
NUP88Q99567 AC008962.1-201ENST00000605729 304 ntBASIC3.99□□□□□ -1.77
NUP88Q99567 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.99□□□□□ -1.77
NUP88Q99567 AL390240.1-201ENST00000612950 384 ntBASIC3.99□□□□□ -1.77
NUP88Q99567 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.99□□□□□ -1.77
NUP88Q99567 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.99□□□□□ -1.77
NUP88Q99567 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
NUP88Q99567 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
NUP88Q99567 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.99□□□□□ -1.77
NUP88Q99567 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
NUP88Q99567 AL049641.1-201ENST00000441055 1948 ntBASIC3.98□□□□□ -1.77
NUP88Q99567 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
NUP88Q99567 MIR184-201ENST00000384962 84 ntBASIC3.98□□□□□ -1.77
NUP88Q99567 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms