Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 AHI1-217ENST00000534469 680 ntTSL 3 BASIC4.14□□□□□ -1.75
CHMP4CQ96CF2 MIR4801-201ENST00000582704 82 ntBASIC4.14□□□□□ -1.75
CHMP4CQ96CF2 AC008521.1-201ENST00000587471 187 ntBASIC4.14□□□□□ -1.75
CHMP4CQ96CF2 AC006557.5-201ENST00000603126 811 ntBASIC4.14□□□□□ -1.75
CHMP4CQ96CF2 AC007179.3-201ENST00000604976 235 ntBASIC4.14□□□□□ -1.75
CHMP4CQ96CF2 AC104458.1-201ENST00000608243 463 ntBASIC4.14□□□□□ -1.75
CHMP4CQ96CF2 FER-210ENST00000628534 558 ntTSL 5 BASIC4.14□□□□□ -1.75
CHMP4CQ96CF2 MTND4P14-201ENST00000435799 1354 ntBASIC4.14□□□□□ -1.75
CHMP4CQ96CF2 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CHMP4CQ96CF2 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CHMP4CQ96CF2 TPTE2P4-201ENST00000258589 1605 ntBASIC4.13□□□□□ -1.75
CHMP4CQ96CF2 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
CHMP4CQ96CF2 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.13□□□□□ -1.75
CHMP4CQ96CF2 AC103710.2-202ENST00000641454 2853 ntBASIC4.13□□□□□ -1.75
CHMP4CQ96CF2 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CHMP4CQ96CF2 Y_RNA.89-201ENST00000363031 102 ntBASIC4.13□□□□□ -1.75
CHMP4CQ96CF2 Y_RNA.295-201ENST00000364918 102 ntBASIC4.13□□□□□ -1.75
CHMP4CQ96CF2 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC4.13□□□□□ -1.75
CHMP4CQ96CF2 SNORD17-201ENST00000390930 237 ntBASIC4.13□□□□□ -1.75
CHMP4CQ96CF2 CISD1P1-201ENST00000393907 327 ntBASIC4.13□□□□□ -1.75
CHMP4CQ96CF2 RNU6-55P-201ENST00000411092 107 ntBASIC4.13□□□□□ -1.75
CHMP4CQ96CF2 RNU6-954P-201ENST00000411355 107 ntBASIC4.13□□□□□ -1.75
CHMP4CQ96CF2 AC007390.1-201ENST00000415722 356 ntBASIC4.13□□□□□ -1.75
CHMP4CQ96CF2 MTND1P23-201ENST00000416931 372 ntBASIC4.13□□□□□ -1.75
CHMP4CQ96CF2 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC4.13□□□□□ -1.75
CHMP4CQ96CF2 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC4.13□□□□□ -1.75
CHMP4CQ96CF2 AC073415.1-201ENST00000449240 153 ntBASIC4.13□□□□□ -1.75
CHMP4CQ96CF2 RPL21P8-201ENST00000465083 535 ntBASIC4.13□□□□□ -1.75
CHMP4CQ96CF2 RPL7P5-201ENST00000471472 736 ntBASIC4.13□□□□□ -1.75
CHMP4CQ96CF2 TRBV1-201ENST00000476502 284 ntBASIC4.13□□□□□ -1.75
CHMP4CQ96CF2 FCF1P3-201ENST00000496394 590 ntBASIC4.13□□□□□ -1.75
CHMP4CQ96CF2 AC092436.1-201ENST00000506450 503 ntBASIC4.13□□□□□ -1.75
CHMP4CQ96CF2 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC4.13□□□□□ -1.75
CHMP4CQ96CF2 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.13□□□□□ -1.75
CHMP4CQ96CF2 RNU6-835P-201ENST00000516974 104 ntBASIC4.13□□□□□ -1.75
CHMP4CQ96CF2 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC4.13□□□□□ -1.75
CHMP4CQ96CF2 AC022690.1-201ENST00000526681 550 ntBASIC4.13□□□□□ -1.75
CHMP4CQ96CF2 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC4.13□□□□□ -1.75
CHMP4CQ96CF2 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC4.13□□□□□ -1.75
CHMP4CQ96CF2 AC068135.2-201ENST00000569293 1028 ntBASIC4.13□□□□□ -1.75
CHMP4CQ96CF2 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC4.13□□□□□ -1.75
CHMP4CQ96CF2 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC4.13□□□□□ -1.75
CHMP4CQ96CF2 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC4.13□□□□□ -1.75
CHMP4CQ96CF2 AL161756.2-201ENST00000604597 246 ntBASIC4.13□□□□□ -1.75
CHMP4CQ96CF2 AL161798.1-201ENST00000604630 131 ntBASIC4.13□□□□□ -1.75
CHMP4CQ96CF2 AC009570.1-201ENST00000609599 745 ntBASIC4.13□□□□□ -1.75
CHMP4CQ96CF2 AC002076.2-201ENST00000617362 122 ntBASIC4.13□□□□□ -1.75
CHMP4CQ96CF2 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC4.13□□□□□ -1.75
CHMP4CQ96CF2 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CHMP4CQ96CF2 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.13□□□□□ -1.75
CHMP4CQ96CF2 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CHMP4CQ96CF2 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
CHMP4CQ96CF2 AC004972.1-201ENST00000623934 2209 ntBASIC4.13□□□□□ -1.75
CHMP4CQ96CF2 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CHMP4CQ96CF2 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CHMP4CQ96CF2 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC4.12□□□□□ -1.75
CHMP4CQ96CF2 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.12□□□□□ -1.75
CHMP4CQ96CF2 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
CHMP4CQ96CF2 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC4.12□□□□□ -1.75
CHMP4CQ96CF2 AL139397.2-201ENST00000404529 772 ntBASIC4.12□□□□□ -1.75
CHMP4CQ96CF2 RNU4-46P-201ENST00000410818 138 ntBASIC4.12□□□□□ -1.75
CHMP4CQ96CF2 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC4.12□□□□□ -1.75
CHMP4CQ96CF2 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC4.12□□□□□ -1.75
CHMP4CQ96CF2 AL592045.1-201ENST00000429867 352 ntBASIC4.12□□□□□ -1.75
CHMP4CQ96CF2 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC4.12□□□□□ -1.75
CHMP4CQ96CF2 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC4.12□□□□□ -1.75
CHMP4CQ96CF2 ELOCP23-201ENST00000452014 332 ntBASIC4.12□□□□□ -1.75
CHMP4CQ96CF2 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC4.12□□□□□ -1.75
CHMP4CQ96CF2 U3.44-201ENST00000458938 192 ntBASIC4.12□□□□□ -1.75
CHMP4CQ96CF2 RPS15AP34-201ENST00000487776 387 ntBASIC4.12□□□□□ -1.75
CHMP4CQ96CF2 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CHMP4CQ96CF2 AC098591.2-201ENST00000510152 315 ntBASIC4.12□□□□□ -1.75
CHMP4CQ96CF2 RNA5SP401-201ENST00000515920 127 ntBASIC4.12□□□□□ -1.75
CHMP4CQ96CF2 RNU6-1178P-201ENST00000516674 107 ntBASIC4.12□□□□□ -1.75
CHMP4CQ96CF2 RN7SKP219-201ENST00000516825 296 ntBASIC4.12□□□□□ -1.75
CHMP4CQ96CF2 RNU6-685P-201ENST00000517088 95 ntBASIC4.12□□□□□ -1.75
CHMP4CQ96CF2 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC4.12□□□□□ -1.75
CHMP4CQ96CF2 CASP1P1-201ENST00000526345 212 ntBASIC4.12□□□□□ -1.75
CHMP4CQ96CF2 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.12□□□□□ -1.75
CHMP4CQ96CF2 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC4.12□□□□□ -1.75
CHMP4CQ96CF2 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC4.12□□□□□ -1.75
CHMP4CQ96CF2 NRBF2P5-201ENST00000603087 788 ntBASIC4.12□□□□□ -1.75
CHMP4CQ96CF2 AL138889.2-201ENST00000603883 242 ntBASIC4.12□□□□□ -1.75
CHMP4CQ96CF2 AL390240.1-201ENST00000612950 384 ntBASIC4.12□□□□□ -1.75
CHMP4CQ96CF2 MIR7975-201ENST00000619350 68 ntBASIC4.12□□□□□ -1.75
CHMP4CQ96CF2 AC027309.3-201ENST00000623419 351 ntBASIC4.12□□□□□ -1.75
CHMP4CQ96CF2 VPS8-228ENST00000628962 207 ntTSL 5 BASIC4.12□□□□□ -1.75
CHMP4CQ96CF2 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC4.12□□□□□ -1.75
CHMP4CQ96CF2 MIR7153-201ENST00000637758 57 ntBASIC4.12□□□□□ -1.75
CHMP4CQ96CF2 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC4.12□□□□□ -1.75
CHMP4CQ96CF2 AL049641.1-201ENST00000441055 1948 ntBASIC4.12□□□□□ -1.75
CHMP4CQ96CF2 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CHMP4CQ96CF2 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC4.12□□□□□ -1.75
CHMP4CQ96CF2 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CHMP4CQ96CF2 AC093908.1-201ENST00000623125 8092 ntBASIC4.11□□□□□ -1.75
CHMP4CQ96CF2 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CHMP4CQ96CF2 RNU6-552P-201ENST00000362869 119 ntBASIC4.11□□□□□ -1.75
CHMP4CQ96CF2 RNU6-116P-201ENST00000384042 109 ntBASIC4.11□□□□□ -1.75
CHMP4CQ96CF2 RPS4XP3-201ENST00000398541 413 ntBASIC4.11□□□□□ -1.75
CHMP4CQ96CF2 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms