Protein–RNA interactions for Protein: Q15878

CACNA1E, Voltage-dependent R-type calcium channel subunit alpha-1E, humanhuman

Predictions only

Length 2,313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1EQ15878 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
CACNA1EQ15878 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
CACNA1EQ15878 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC0.85□□□□□ -2.27
CACNA1EQ15878 MED28P6-201ENST00000558776 231 ntBASIC0.85□□□□□ -2.27
CACNA1EQ15878 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC0.85□□□□□ -2.27
CACNA1EQ15878 MIR4287-201ENST00000579398 78 ntBASIC0.85□□□□□ -2.27
CACNA1EQ15878 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC0.85□□□□□ -2.27
CACNA1EQ15878 AC011374.2-201ENST00000607135 526 ntBASIC0.85□□□□□ -2.27
CACNA1EQ15878 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC0.84□□□□□ -2.27
CACNA1EQ15878 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.27
CACNA1EQ15878 TRIM60P5Y-201ENST00000413946 574 ntBASIC0.84□□□□□ -2.27
CACNA1EQ15878 RPL27AP8-201ENST00000424277 446 ntBASIC0.84□□□□□ -2.27
CACNA1EQ15878 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC0.84□□□□□ -2.27
CACNA1EQ15878 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC0.84□□□□□ -2.27
CACNA1EQ15878 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC0.84□□□□□ -2.27
CACNA1EQ15878 AC025459.1-201ENST00000504072 156 ntBASIC0.84□□□□□ -2.27
CACNA1EQ15878 PRELID3BP4-201ENST00000515476 571 ntBASIC0.84□□□□□ -2.27
CACNA1EQ15878 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC0.84□□□□□ -2.27
CACNA1EQ15878 AL132857.1-201ENST00000555180 708 ntBASIC0.84□□□□□ -2.27
CACNA1EQ15878 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC0.84□□□□□ -2.27
CACNA1EQ15878 OR1M4P-201ENST00000589199 287 ntBASIC0.84□□□□□ -2.27
CACNA1EQ15878 CR848007.1-201ENST00000442354 1699 ntBASIC0.84□□□□□ -2.27
CACNA1EQ15878 RNU4-42P-201ENST00000364738 142 ntBASIC0.84□□□□□ -2.28
CACNA1EQ15878 MIR147B-201ENST00000390185 80 ntBASIC0.84□□□□□ -2.28
CACNA1EQ15878 RNU6-837P-201ENST00000391056 108 ntBASIC0.84□□□□□ -2.28
CACNA1EQ15878 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC0.84□□□□□ -2.28
CACNA1EQ15878 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC0.84□□□□□ -2.28
CACNA1EQ15878 SDAD1P3-201ENST00000427380 333 ntBASIC0.84□□□□□ -2.28
CACNA1EQ15878 USP12PX-201ENST00000432383 1057 ntBASIC0.84□□□□□ -2.28
CACNA1EQ15878 AC023512.1-201ENST00000444513 499 ntBASIC0.84□□□□□ -2.28
CACNA1EQ15878 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC0.84□□□□□ -2.28
CACNA1EQ15878 BX248409.1-201ENST00000455497 255 ntBASIC0.84□□□□□ -2.28
CACNA1EQ15878 RPS20P20-201ENST00000460498 340 ntBASIC0.84□□□□□ -2.28
CACNA1EQ15878 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC0.84□□□□□ -2.28
CACNA1EQ15878 AC067904.2-201ENST00000517322 1283 ntBASIC0.84□□□□□ -2.28
CACNA1EQ15878 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC0.84□□□□□ -2.28
CACNA1EQ15878 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC0.84□□□□□ -2.28
CACNA1EQ15878 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC0.84□□□□□ -2.28
CACNA1EQ15878 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC0.84□□□□□ -2.28
CACNA1EQ15878 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC0.84□□□□□ -2.28
CACNA1EQ15878 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.84□□□□□ -2.28
CACNA1EQ15878 AC078899.2-201ENST00000595282 212 ntBASIC0.84□□□□□ -2.28
CACNA1EQ15878 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC0.84□□□□□ -2.28
CACNA1EQ15878 MIR8087-201ENST00000612745 78 ntBASIC0.84□□□□□ -2.28
CACNA1EQ15878 MTND4P27-201ENST00000450813 1354 ntBASIC0.83□□□□□ -2.28
CACNA1EQ15878 MIR126-201ENST00000362291 85 ntBASIC0.83□□□□□ -2.28
CACNA1EQ15878 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
CACNA1EQ15878 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
CACNA1EQ15878 RNU6-1235P-201ENST00000384559 107 ntBASIC0.83□□□□□ -2.28
CACNA1EQ15878 PTGES3P2-201ENST00000407942 482 ntBASIC0.83□□□□□ -2.28
CACNA1EQ15878 AC098614.2-201ENST00000426040 255 ntBASIC0.83□□□□□ -2.28
CACNA1EQ15878 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC0.83□□□□□ -2.28
CACNA1EQ15878 AC015922.2-201ENST00000435593 184 ntBASIC0.83□□□□□ -2.28
CACNA1EQ15878 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC0.83□□□□□ -2.28
CACNA1EQ15878 SNRPGP6-201ENST00000451124 220 ntBASIC0.83□□□□□ -2.28
CACNA1EQ15878 RNU6-498P-201ENST00000459468 107 ntBASIC0.83□□□□□ -2.28
CACNA1EQ15878 AC096745.1-201ENST00000509945 370 ntBASIC0.83□□□□□ -2.28
CACNA1EQ15878 LRRC34P2-201ENST00000514850 553 ntBASIC0.83□□□□□ -2.28
CACNA1EQ15878 RNU6-491P-201ENST00000516099 110 ntBASIC0.83□□□□□ -2.28
CACNA1EQ15878 MIR3609-201ENST00000582661 80 ntBASIC0.83□□□□□ -2.28
CACNA1EQ15878 AC025165.5-201ENST00000602802 578 ntBASIC0.83□□□□□ -2.28
CACNA1EQ15878 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC0.83□□□□□ -2.28
CACNA1EQ15878 AL009028.1-201ENST00000604895 802 ntBASIC0.83□□□□□ -2.28
CACNA1EQ15878 AC106900.2-201ENST00000604994 317 ntBASIC0.83□□□□□ -2.28
CACNA1EQ15878 AC004908.2-201ENST00000609090 574 ntBASIC0.83□□□□□ -2.28
CACNA1EQ15878 AC027309.3-201ENST00000623419 351 ntBASIC0.83□□□□□ -2.28
CACNA1EQ15878 AC095031.1-201ENST00000623685 672 ntBASIC0.83□□□□□ -2.28
CACNA1EQ15878 Y_RNA.280-201ENST00000364765 112 ntBASIC0.83□□□□□ -2.28
CACNA1EQ15878 RNU6-821P-201ENST00000390995 107 ntBASIC0.83□□□□□ -2.28
CACNA1EQ15878 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC0.83□□□□□ -2.28
CACNA1EQ15878 AC006548.1-201ENST00000427470 102 ntBASIC0.83□□□□□ -2.28
CACNA1EQ15878 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC0.83□□□□□ -2.28
CACNA1EQ15878 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
CACNA1EQ15878 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC0.83□□□□□ -2.28
CACNA1EQ15878 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC0.83□□□□□ -2.28
CACNA1EQ15878 BUD31P2-201ENST00000449374 300 ntBASIC0.83□□□□□ -2.28
CACNA1EQ15878 RPS27AP10-201ENST00000496103 208 ntBASIC0.83□□□□□ -2.28
CACNA1EQ15878 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
CACNA1EQ15878 AC016065.2-201ENST00000514530 444 ntBASIC0.83□□□□□ -2.28
CACNA1EQ15878 AC074029.2-201ENST00000551045 634 ntBASIC0.83□□□□□ -2.28
CACNA1EQ15878 EEF1B2P4-201ENST00000551398 348 ntBASIC0.83□□□□□ -2.28
CACNA1EQ15878 AL161423.1-201ENST00000613700 262 ntBASIC0.83□□□□□ -2.28
CACNA1EQ15878 CR381572.1-201ENST00000625098 102 ntBASIC0.83□□□□□ -2.28
CACNA1EQ15878 SUCLA2P2-201ENST00000417269 1309 ntBASIC0.82□□□□□ -2.28
CACNA1EQ15878 RNU6-115P-201ENST00000364310 107 ntBASIC0.82□□□□□ -2.28
CACNA1EQ15878 RNA5SP125-201ENST00000364843 120 ntBASIC0.82□□□□□ -2.28
CACNA1EQ15878 SNORD51-201ENST00000384320 80 ntBASIC0.82□□□□□ -2.28
CACNA1EQ15878 RNU6-185P-201ENST00000384421 107 ntBASIC0.82□□□□□ -2.28
CACNA1EQ15878 RNU6-19P-201ENST00000384718 107 ntBASIC0.82□□□□□ -2.28
CACNA1EQ15878 SFR1P1-201ENST00000403720 688 ntBASIC0.82□□□□□ -2.28
CACNA1EQ15878 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC0.82□□□□□ -2.28
CACNA1EQ15878 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC0.82□□□□□ -2.28
CACNA1EQ15878 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC0.82□□□□□ -2.28
CACNA1EQ15878 OFD1P13Y-201ENST00000431179 1232 ntBASIC0.82□□□□□ -2.28
CACNA1EQ15878 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC0.82□□□□□ -2.28
CACNA1EQ15878 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
CACNA1EQ15878 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC0.82□□□□□ -2.28
CACNA1EQ15878 AC107626.1-201ENST00000471084 183 ntBASIC0.82□□□□□ -2.28
CACNA1EQ15878 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC0.82□□□□□ -2.28
CACNA1EQ15878 RPS27P26-201ENST00000494583 239 ntBASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 131.4 ms