Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
GFRA1P56159 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.04□□□□□ -1.76
GFRA1P56159 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
GFRA1P56159 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.04□□□□□ -1.76
GFRA1P56159 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.04□□□□□ -1.76
GFRA1P56159 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.04□□□□□ -1.76
GFRA1P56159 RNU1-108P-201ENST00000362556 161 ntBASIC4.04□□□□□ -1.76
GFRA1P56159 RN7SKP227-201ENST00000364445 330 ntBASIC4.04□□□□□ -1.76
GFRA1P56159 Y_RNA.401-201ENST00000383965 117 ntBASIC4.04□□□□□ -1.76
GFRA1P56159 Y_RNA.645-201ENST00000391229 102 ntBASIC4.04□□□□□ -1.76
GFRA1P56159 AL138885.1-201ENST00000405921 675 ntBASIC4.04□□□□□ -1.76
GFRA1P56159 RNU6-1156P-201ENST00000410365 100 ntBASIC4.04□□□□□ -1.76
GFRA1P56159 HMGB3P2-201ENST00000411913 584 ntBASIC4.04□□□□□ -1.76
GFRA1P56159 HNRNPDLP1-201ENST00000412834 550 ntBASIC4.04□□□□□ -1.76
GFRA1P56159 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC4.04□□□□□ -1.76
GFRA1P56159 DPH3P2-201ENST00000422618 250 ntBASIC4.04□□□□□ -1.76
GFRA1P56159 EIF4EP2-201ENST00000422816 654 ntBASIC4.04□□□□□ -1.76
GFRA1P56159 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.04□□□□□ -1.76
GFRA1P56159 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC4.04□□□□□ -1.76
GFRA1P56159 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.04□□□□□ -1.76
GFRA1P56159 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC4.04□□□□□ -1.76
GFRA1P56159 RN7SL860P-201ENST00000473738 223 ntBASIC4.04□□□□□ -1.76
GFRA1P56159 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC4.04□□□□□ -1.76
GFRA1P56159 RNA5SP446-201ENST00000515955 82 ntBASIC4.04□□□□□ -1.76
GFRA1P56159 RN7SKP289-201ENST00000517244 295 ntBASIC4.04□□□□□ -1.76
GFRA1P56159 AP002404.1-201ENST00000532005 451 ntBASIC4.04□□□□□ -1.76
GFRA1P56159 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.04□□□□□ -1.76
GFRA1P56159 AC004817.2-201ENST00000561794 651 ntBASIC4.04□□□□□ -1.76
GFRA1P56159 MIR4503-201ENST00000582187 83 ntBASIC4.04□□□□□ -1.76
GFRA1P56159 AC091178.1-203ENST00000584586 279 ntBASIC4.04□□□□□ -1.76
GFRA1P56159 MIR3149-201ENST00000584629 83 ntBASIC4.04□□□□□ -1.76
GFRA1P56159 AL121655.1-201ENST00000605811 308 ntBASIC4.04□□□□□ -1.76
GFRA1P56159 AC020634.1-201ENST00000608701 549 ntBASIC4.04□□□□□ -1.76
GFRA1P56159 MIR6891-201ENST00000618788 93 ntBASIC4.04□□□□□ -1.76
GFRA1P56159 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.04□□□□□ -1.76
GFRA1P56159 AL023881.1-201ENST00000621088 301 ntBASIC4.04□□□□□ -1.76
GFRA1P56159 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
GFRA1P56159 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.04□□□□□ -1.76
GFRA1P56159 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
GFRA1P56159 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
GFRA1P56159 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
GFRA1P56159 AC091812.1-201ENST00000432235 1948 ntBASIC4.03□□□□□ -1.76
GFRA1P56159 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
GFRA1P56159 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
GFRA1P56159 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
GFRA1P56159 ZNF299P-201ENST00000406845 1804 ntBASIC4.03□□□□□ -1.76
GFRA1P56159 FTLP6-201ENST00000355274 422 ntBASIC4.03□□□□□ -1.76
GFRA1P56159 RNU6-217P-201ENST00000384164 104 ntBASIC4.03□□□□□ -1.76
GFRA1P56159 Y_RNA.452-201ENST00000384202 108 ntBASIC4.03□□□□□ -1.76
GFRA1P56159 RNU6-72P-201ENST00000384285 79 ntBASIC4.03□□□□□ -1.76
GFRA1P56159 MIR625-201ENST00000385047 85 ntBASIC4.03□□□□□ -1.76
GFRA1P56159 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
GFRA1P56159 U3.42-201ENST00000408746 214 ntBASIC4.03□□□□□ -1.76
GFRA1P56159 RNA5SP239-201ENST00000410218 129 ntBASIC4.03□□□□□ -1.76
GFRA1P56159 RPS20P14-201ENST00000412545 360 ntBASIC4.03□□□□□ -1.76
GFRA1P56159 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC4.03□□□□□ -1.76
GFRA1P56159 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
GFRA1P56159 AC108032.1-201ENST00000416706 207 ntBASIC4.03□□□□□ -1.76
GFRA1P56159 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.03□□□□□ -1.76
GFRA1P56159 AL358472.1-201ENST00000431295 329 ntBASIC4.03□□□□□ -1.76
GFRA1P56159 AC013470.1-201ENST00000453438 462 ntBASIC4.03□□□□□ -1.76
GFRA1P56159 AL353752.1-201ENST00000454946 260 ntBASIC4.03□□□□□ -1.76
GFRA1P56159 snoU109.2-201ENST00000459316 135 ntBASIC4.03□□□□□ -1.76
GFRA1P56159 AC011276.1-201ENST00000469688 323 ntBASIC4.03□□□□□ -1.76
GFRA1P56159 AC108751.2-201ENST00000469993 231 ntBASIC4.03□□□□□ -1.76
GFRA1P56159 RN7SL810P-201ENST00000493031 276 ntBASIC4.03□□□□□ -1.76
GFRA1P56159 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC4.03□□□□□ -1.76
GFRA1P56159 RNA5SP360-201ENST00000516555 118 ntBASIC4.03□□□□□ -1.76
GFRA1P56159 IGKV2D-19-201ENST00000523346 262 ntBASIC4.03□□□□□ -1.76
GFRA1P56159 AP000889.1-201ENST00000530968 660 ntBASIC4.03□□□□□ -1.76
GFRA1P56159 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC4.03□□□□□ -1.76
GFRA1P56159 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC4.03□□□□□ -1.76
GFRA1P56159 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC4.03□□□□□ -1.76
GFRA1P56159 SRGNP1-201ENST00000603392 451 ntBASIC4.03□□□□□ -1.76
GFRA1P56159 FTX_3.1-201ENST00000610451 147 ntBASIC4.03□□□□□ -1.76
GFRA1P56159 HMGB1P24-202ENST00000615653 685 ntBASIC4.03□□□□□ -1.76
GFRA1P56159 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC4.03□□□□□ -1.76
GFRA1P56159 AC138627.2-201ENST00000624202 601 ntBASIC4.03□□□□□ -1.76
GFRA1P56159 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.03□□□□□ -1.76
GFRA1P56159 AC008669.1-201ENST00000565823 2178 ntBASIC4.03□□□□□ -1.76
GFRA1P56159 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
GFRA1P56159 AC090740.1-201ENST00000623193 2262 ntBASIC4.02□□□□□ -1.77
GFRA1P56159 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
GFRA1P56159 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
GFRA1P56159 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
GFRA1P56159 MTND5P9-201ENST00000503854 1755 ntBASIC4.02□□□□□ -1.77
GFRA1P56159 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
GFRA1P56159 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
GFRA1P56159 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.02□□□□□ -1.77
GFRA1P56159 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
GFRA1P56159 Y_RNA.47-201ENST00000362697 108 ntBASIC4.02□□□□□ -1.77
GFRA1P56159 RNU6-428P-201ENST00000362942 107 ntBASIC4.02□□□□□ -1.77
GFRA1P56159 RNA5SP509-201ENST00000364577 119 ntBASIC4.02□□□□□ -1.77
GFRA1P56159 Y_RNA.533-201ENST00000384596 114 ntBASIC4.02□□□□□ -1.77
GFRA1P56159 RNU6-658P-201ENST00000384606 106 ntBASIC4.02□□□□□ -1.77
GFRA1P56159 MIR568-201ENST00000385036 95 ntBASIC4.02□□□□□ -1.77
GFRA1P56159 TMEM167AP1-201ENST00000423409 219 ntBASIC4.02□□□□□ -1.77
GFRA1P56159 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC4.02□□□□□ -1.77
GFRA1P56159 AC112492.4-201ENST00000456549 352 ntBASIC4.02□□□□□ -1.77
GFRA1P56159 AL445433.1-201ENST00000457507 257 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms