Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CDH11P55287 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CDH11P55287 NDUFB4P5-201ENST00000415445 361 ntBASIC2.93□□□□□ -1.94
CDH11P55287 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.93□□□□□ -1.94
CDH11P55287 AL356867.1-201ENST00000429623 299 ntBASIC2.93□□□□□ -1.94
CDH11P55287 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.93□□□□□ -1.94
CDH11P55287 UBE2V1P8-201ENST00000437166 265 ntBASIC2.93□□□□□ -1.94
CDH11P55287 RPS24P13-201ENST00000442520 397 ntBASIC2.93□□□□□ -1.94
CDH11P55287 NEFMP1-201ENST00000443423 1006 ntBASIC2.93□□□□□ -1.94
CDH11P55287 FDX1P2-201ENST00000450769 375 ntBASIC2.93□□□□□ -1.94
CDH11P55287 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC2.93□□□□□ -1.94
CDH11P55287 DCLRE1CP1-201ENST00000454630 470 ntBASIC2.93□□□□□ -1.94
CDH11P55287 AL356010.1-201ENST00000456364 102 ntBASIC2.93□□□□□ -1.94
CDH11P55287 AC022364.2-201ENST00000457963 554 ntBASIC2.93□□□□□ -1.94
CDH11P55287 AC146507.2-201ENST00000460608 476 ntBASIC2.93□□□□□ -1.94
CDH11P55287 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.93□□□□□ -1.94
CDH11P55287 AC012181.1-201ENST00000479895 423 ntBASIC2.93□□□□□ -1.94
CDH11P55287 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC2.93□□□□□ -1.94
CDH11P55287 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.93□□□□□ -1.94
CDH11P55287 Y_RNA.693-201ENST00000516641 110 ntBASIC2.93□□□□□ -1.94
CDH11P55287 RN7SKP57-201ENST00000517248 293 ntBASIC2.93□□□□□ -1.94
CDH11P55287 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC2.93□□□□□ -1.94
CDH11P55287 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.93□□□□□ -1.94
CDH11P55287 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC2.93□□□□□ -1.94
CDH11P55287 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.93□□□□□ -1.94
CDH11P55287 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.93□□□□□ -1.94
CDH11P55287 AL163153.1-201ENST00000554223 283 ntBASIC2.93□□□□□ -1.94
CDH11P55287 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC2.93□□□□□ -1.94
CDH11P55287 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC2.93□□□□□ -1.94
CDH11P55287 HMGB1P33-201ENST00000563485 527 ntBASIC2.93□□□□□ -1.94
CDH11P55287 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.93□□□□□ -1.94
CDH11P55287 HMGB1P6-201ENST00000569046 646 ntBASIC2.93□□□□□ -1.94
CDH11P55287 AC174048.1-201ENST00000603389 144 ntBASIC2.93□□□□□ -1.94
CDH11P55287 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.93□□□□□ -1.94
CDH11P55287 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
CDH11P55287 AL589994.2-201ENST00000621124 579 ntBASIC2.93□□□□□ -1.94
CDH11P55287 AC139792.3-201ENST00000623525 224 ntBASIC2.93□□□□□ -1.94
CDH11P55287 MTND1P37-201ENST00000636562 264 ntBASIC2.93□□□□□ -1.94
CDH11P55287 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.93□□□□□ -1.94
CDH11P55287 FAM35CP-201ENST00000554755 2470 ntBASIC2.93□□□□□ -1.94
CDH11P55287 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CDH11P55287 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CDH11P55287 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC2.93□□□□□ -1.94
CDH11P55287 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CDH11P55287 AL136164.4-201ENST00000625013 2135 ntBASIC2.92□□□□□ -1.94
CDH11P55287 AL356274.2-201ENST00000624379 3752 ntBASIC2.92□□□□□ -1.94
CDH11P55287 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.92□□□□□ -1.94
CDH11P55287 RNU4-48P-201ENST00000365559 182 ntBASIC2.92□□□□□ -1.94
CDH11P55287 SNORA46-201ENST00000384762 135 ntBASIC2.92□□□□□ -1.94
CDH11P55287 RNU6-817P-201ENST00000391083 104 ntBASIC2.92□□□□□ -1.94
CDH11P55287 RNU2-9P-201ENST00000410194 145 ntBASIC2.92□□□□□ -1.94
CDH11P55287 OR51A5P-201ENST00000415429 942 ntBASIC2.92□□□□□ -1.94
CDH11P55287 AC245054.2-201ENST00000415639 319 ntBASIC2.92□□□□□ -1.94
CDH11P55287 EIF1P1-201ENST00000421436 341 ntBASIC2.92□□□□□ -1.94
CDH11P55287 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC2.92□□□□□ -1.94
CDH11P55287 USP9YP18-201ENST00000425912 695 ntBASIC2.92□□□□□ -1.94
CDH11P55287 MTCO3P30-201ENST00000426425 670 ntBASIC2.92□□□□□ -1.94
CDH11P55287 ISCA1P1-201ENST00000426679 387 ntBASIC2.92□□□□□ -1.94
CDH11P55287 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.92□□□□□ -1.94
CDH11P55287 AC006028.1-201ENST00000438379 402 ntBASIC2.92□□□□□ -1.94
CDH11P55287 CYCSP32-201ENST00000440548 321 ntBASIC2.92□□□□□ -1.94
CDH11P55287 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.92□□□□□ -1.94
CDH11P55287 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC2.92□□□□□ -1.94
CDH11P55287 AC009237.8-201ENST00000445492 379 ntBASIC2.92□□□□□ -1.94
CDH11P55287 UQCRHP3-201ENST00000451503 251 ntBASIC2.92□□□□□ -1.94
CDH11P55287 AL135752.1-201ENST00000479477 471 ntBASIC2.92□□□□□ -1.94
CDH11P55287 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.92□□□□□ -1.94
CDH11P55287 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.92□□□□□ -1.94
CDH11P55287 AC098591.2-201ENST00000510152 315 ntBASIC2.92□□□□□ -1.94
CDH11P55287 MTND4LP26-201ENST00000518144 282 ntBASIC2.92□□□□□ -1.94
CDH11P55287 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.92□□□□□ -1.94
CDH11P55287 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.92□□□□□ -1.94
CDH11P55287 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC2.92□□□□□ -1.94
CDH11P55287 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.92□□□□□ -1.94
CDH11P55287 AC012507.3-201ENST00000603556 477 ntBASIC2.92□□□□□ -1.94
CDH11P55287 AC104763.2-201ENST00000604179 382 ntBASIC2.92□□□□□ -1.94
CDH11P55287 AP001596.2-201ENST00000608410 312 ntBASIC2.92□□□□□ -1.94
CDH11P55287 MTND5P42-201ENST00000637720 498 ntBASIC2.92□□□□□ -1.94
CDH11P55287 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CDH11P55287 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
CDH11P55287 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
CDH11P55287 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.92□□□□□ -1.94
CDH11P55287 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.92□□□□□ -1.94
CDH11P55287 MTND5P7-201ENST00000413558 1798 ntBASIC2.92□□□□□ -1.94
CDH11P55287 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC2.92□□□□□ -1.94
CDH11P55287 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CDH11P55287 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CDH11P55287 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CDH11P55287 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC2.91□□□□□ -1.94
CDH11P55287 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.91□□□□□ -1.94
CDH11P55287 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CDH11P55287 AL139276.1-201ENST00000311910 1001 ntBASIC2.91□□□□□ -1.94
CDH11P55287 RNU6-641P-201ENST00000384006 107 ntBASIC2.91□□□□□ -1.94
CDH11P55287 RNU6-1197P-201ENST00000391183 107 ntBASIC2.91□□□□□ -1.94
CDH11P55287 CIR1P3-201ENST00000405137 479 ntBASIC2.91□□□□□ -1.94
CDH11P55287 Z92545.1-201ENST00000411782 234 ntBASIC2.91□□□□□ -1.94
CDH11P55287 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.91□□□□□ -1.94
CDH11P55287 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.91□□□□□ -1.94
CDH11P55287 AL109913.1-201ENST00000421173 514 ntBASIC2.91□□□□□ -1.94
CDH11P55287 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 581.2 ms