Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC6.01□□□□□ -1.45
NUBP1P53384 CYCSP1-201ENST00000604815 315 ntBASIC6.01□□□□□ -1.45
NUBP1P53384 AC006133.1-201ENST00000617106 264 ntBASIC6.01□□□□□ -1.45
NUBP1P53384 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC6.01□□□□□ -1.45
NUBP1P53384 AC034229.6-201ENST00000623704 224 ntBASIC6.01□□□□□ -1.45
NUBP1P53384 MIR1245B-201ENST00000636115 69 ntBASIC6.01□□□□□ -1.45
NUBP1P53384 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
NUBP1P53384 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
NUBP1P53384 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
NUBP1P53384 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
NUBP1P53384 ARHGAP12-204ENST00000375250 4914 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
NUBP1P53384 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC6.01□□□□□ -1.45
NUBP1P53384 AC007256.1-201ENST00000392253 2765 ntBASIC6.01□□□□□ -1.45
NUBP1P53384 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
NUBP1P53384 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC6□□□□□ -1.45
NUBP1P53384 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC6□□□□□ -1.45
NUBP1P53384 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6□□□□□ -1.45
NUBP1P53384 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC6□□□□□ -1.45
NUBP1P53384 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC6□□□□□ -1.45
NUBP1P53384 AC092070.2-203ENST00000598377 3644 ntBASIC6□□□□□ -1.45
NUBP1P53384 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
NUBP1P53384 Y_RNA.544-201ENST00000384650 113 ntBASIC6□□□□□ -1.45
NUBP1P53384 SNORA1.3-201ENST00000384676 136 ntBASIC6□□□□□ -1.45
NUBP1P53384 MIR141-201ENST00000384975 95 ntBASIC6□□□□□ -1.45
NUBP1P53384 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC6□□□□□ -1.45
NUBP1P53384 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC6□□□□□ -1.45
NUBP1P53384 RPS23P6-201ENST00000466136 431 ntBASIC6□□□□□ -1.45
NUBP1P53384 AC093815.1-201ENST00000508637 280 ntBASIC6□□□□□ -1.45
NUBP1P53384 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6□□□□□ -1.45
NUBP1P53384 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6□□□□□ -1.45
NUBP1P53384 AC009831.4-201ENST00000620744 325 ntBASIC6□□□□□ -1.45
NUBP1P53384 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
NUBP1P53384 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC6□□□□□ -1.45
NUBP1P53384 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC6□□□□□ -1.45
NUBP1P53384 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC6□□□□□ -1.45
NUBP1P53384 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC6□□□□□ -1.45
NUBP1P53384 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC6□□□□□ -1.45
NUBP1P53384 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
NUBP1P53384 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
NUBP1P53384 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
NUBP1P53384 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.99□□□□□ -1.45
NUBP1P53384 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC5.99□□□□□ -1.45
NUBP1P53384 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC5.99□□□□□ -1.45
NUBP1P53384 RNA5SP319-201ENST00000362768 119 ntBASIC5.99□□□□□ -1.45
NUBP1P53384 U8.4-201ENST00000363626 134 ntBASIC5.99□□□□□ -1.45
NUBP1P53384 RNU6-674P-201ENST00000363831 107 ntBASIC5.99□□□□□ -1.45
NUBP1P53384 SNORA18.2-201ENST00000383865 132 ntBASIC5.99□□□□□ -1.45
NUBP1P53384 MIR195-201ENST00000385194 87 ntBASIC5.99□□□□□ -1.45
NUBP1P53384 MIR1263-201ENST00000408324 86 ntBASIC5.99□□□□□ -1.45
NUBP1P53384 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC5.99□□□□□ -1.45
NUBP1P53384 AL135786.1-201ENST00000415892 214 ntBASIC5.99□□□□□ -1.45
NUBP1P53384 AC006463.2-201ENST00000473326 348 ntBASIC5.99□□□□□ -1.45
NUBP1P53384 RN7SL808P-201ENST00000496066 299 ntBASIC5.99□□□□□ -1.45
NUBP1P53384 SNORA18.4-201ENST00000516440 124 ntBASIC5.99□□□□□ -1.45
NUBP1P53384 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC5.99□□□□□ -1.45
NUBP1P53384 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.99□□□□□ -1.45
NUBP1P53384 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
NUBP1P53384 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
NUBP1P53384 AC062029.1-202ENST00000606164 3651 ntBASIC5.99□□□□□ -1.45
NUBP1P53384 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
NUBP1P53384 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
NUBP1P53384 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
NUBP1P53384 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.99□□□□□ -1.45
NUBP1P53384 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC5.99□□□□□ -1.45
NUBP1P53384 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
NUBP1P53384 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.99□□□□□ -1.45
NUBP1P53384 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
NUBP1P53384 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
NUBP1P53384 AL159152.1-201ENST00000635019 2587 ntBASIC5.98□□□□□ -1.45
NUBP1P53384 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
NUBP1P53384 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
NUBP1P53384 RPL23P2-201ENST00000320371 421 ntBASIC5.98□□□□□ -1.45
NUBP1P53384 MIR873-201ENST00000401120 77 ntBASIC5.98□□□□□ -1.45
NUBP1P53384 AC009220.1-201ENST00000451614 275 ntBASIC5.98□□□□□ -1.45
NUBP1P53384 DCLRE1CP1-201ENST00000454630 470 ntBASIC5.98□□□□□ -1.45
NUBP1P53384 RPL36AP21-201ENST00000490372 323 ntBASIC5.98□□□□□ -1.45
NUBP1P53384 AC072052.1-201ENST00000496556 306 ntBASIC5.98□□□□□ -1.45
NUBP1P53384 AL671862.1-201ENST00000515851 349 ntBASIC5.98□□□□□ -1.45
NUBP1P53384 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC5.98□□□□□ -1.45
NUBP1P53384 AC062037.1-201ENST00000605302 128 ntBASIC5.98□□□□□ -1.45
NUBP1P53384 AL139099.4-201ENST00000614802 114 ntBASIC5.98□□□□□ -1.45
NUBP1P53384 AC022893.2-201ENST00000564832 3296 ntBASIC5.98□□□□□ -1.45
NUBP1P53384 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
NUBP1P53384 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
NUBP1P53384 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC5.98□□□□□ -1.45
NUBP1P53384 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC5.98□□□□□ -1.45
NUBP1P53384 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.98□□□□□ -1.45
NUBP1P53384 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
NUBP1P53384 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
NUBP1P53384 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC5.98□□□□□ -1.45
NUBP1P53384 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
NUBP1P53384 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
NUBP1P53384 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC5.98□□□□□ -1.45
NUBP1P53384 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC5.98□□□□□ -1.45
NUBP1P53384 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
NUBP1P53384 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC5.98□□□□□ -1.45
NUBP1P53384 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
NUBP1P53384 AC007496.3-201ENST00000624987 3443 ntBASIC5.97□□□□□ -1.45
NUBP1P53384 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.97□□□□□ -1.45
NUBP1P53384 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms