Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 RN7SKP272-201ENST00000516988 232 ntBASIC3.46□□□□□ -1.86
HOXC6P09630 OR4R1P-201ENST00000529879 463 ntBASIC3.46□□□□□ -1.86
HOXC6P09630 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
HOXC6P09630 OR5B19P-201ENST00000531766 928 ntBASIC3.46□□□□□ -1.86
HOXC6P09630 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.46□□□□□ -1.86
HOXC6P09630 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.46□□□□□ -1.86
HOXC6P09630 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.46□□□□□ -1.86
HOXC6P09630 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.46□□□□□ -1.86
HOXC6P09630 GLUD1P4-201ENST00000590914 418 ntBASIC3.46□□□□□ -1.86
HOXC6P09630 AC007038.2-201ENST00000608095 740 ntBASIC3.46□□□□□ -1.86
HOXC6P09630 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.46□□□□□ -1.86
HOXC6P09630 AL136313.1-201ENST00000624804 202 ntBASIC3.46□□□□□ -1.86
HOXC6P09630 AL359697.1-201ENST00000624879 587 ntBASIC3.46□□□□□ -1.86
HOXC6P09630 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.46□□□□□ -1.86
HOXC6P09630 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.46□□□□□ -1.86
HOXC6P09630 AC099654.10-201ENST00000640395 161 ntBASIC3.46□□□□□ -1.86
HOXC6P09630 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.45□□□□□ -1.86
HOXC6P09630 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
HOXC6P09630 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
HOXC6P09630 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
HOXC6P09630 RNU6-1097P-201ENST00000363586 107 ntBASIC3.45□□□□□ -1.86
HOXC6P09630 Y_RNA.279-201ENST00000364763 95 ntBASIC3.45□□□□□ -1.86
HOXC6P09630 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
HOXC6P09630 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HOXC6P09630 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC3.45□□□□□ -1.86
HOXC6P09630 CKS1BP5-201ENST00000434172 273 ntBASIC3.45□□□□□ -1.86
HOXC6P09630 SEPT14P3-201ENST00000439401 183 ntBASIC3.45□□□□□ -1.86
HOXC6P09630 AL732372.2-207ENST00000445840 183 ntBASIC3.45□□□□□ -1.86
HOXC6P09630 SNRPGP6-201ENST00000451124 220 ntBASIC3.45□□□□□ -1.86
HOXC6P09630 SEPT14P2-201ENST00000453405 183 ntBASIC3.45□□□□□ -1.86
HOXC6P09630 HMGN1P18-201ENST00000457642 277 ntBASIC3.45□□□□□ -1.86
HOXC6P09630 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.45□□□□□ -1.86
HOXC6P09630 RNU6-261P-201ENST00000459506 102 ntBASIC3.45□□□□□ -1.86
HOXC6P09630 AC092451.1-201ENST00000480211 153 ntBASIC3.45□□□□□ -1.86
HOXC6P09630 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.45□□□□□ -1.86
HOXC6P09630 HIGD1AP13-201ENST00000509878 289 ntBASIC3.45□□□□□ -1.86
HOXC6P09630 SEPT14P4-201ENST00000513445 186 ntBASIC3.45□□□□□ -1.86
HOXC6P09630 SNORA40.12-201ENST00000516329 111 ntBASIC3.45□□□□□ -1.86
HOXC6P09630 RNU2-58P-201ENST00000516403 183 ntBASIC3.45□□□□□ -1.86
HOXC6P09630 FO082796.1-201ENST00000523795 183 ntBASIC3.45□□□□□ -1.86
HOXC6P09630 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
HOXC6P09630 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.45□□□□□ -1.86
HOXC6P09630 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.45□□□□□ -1.86
HOXC6P09630 COX6CP3-201ENST00000580869 223 ntBASIC3.45□□□□□ -1.86
HOXC6P09630 AP001029.3-201ENST00000588063 596 ntBASIC3.45□□□□□ -1.86
HOXC6P09630 AL121992.2-201ENST00000606262 256 ntBASIC3.45□□□□□ -1.86
HOXC6P09630 AL138713.1-201ENST00000624026 2130 ntBASIC3.45□□□□□ -1.86
HOXC6P09630 AC138649.5-201ENST00000637456 137 ntBASIC3.45□□□□□ -1.86
HOXC6P09630 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
HOXC6P09630 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
HOXC6P09630 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.44□□□□□ -1.86
HOXC6P09630 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HOXC6P09630 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.44□□□□□ -1.86
HOXC6P09630 AC073325.2-201ENST00000339545 159 ntBASIC3.44□□□□□ -1.86
HOXC6P09630 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
HOXC6P09630 Y_RNA.22-201ENST00000362492 102 ntBASIC3.44□□□□□ -1.86
HOXC6P09630 RNU5A-8P-201ENST00000364102 114 ntBASIC3.44□□□□□ -1.86
HOXC6P09630 Y_RNA.356-201ENST00000365475 113 ntBASIC3.44□□□□□ -1.86
HOXC6P09630 SNORD51-201ENST00000384320 80 ntBASIC3.44□□□□□ -1.86
HOXC6P09630 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HOXC6P09630 RNA5SP184-201ENST00000411071 108 ntBASIC3.44□□□□□ -1.86
HOXC6P09630 SDCBPP3-201ENST00000419629 891 ntBASIC3.44□□□□□ -1.86
HOXC6P09630 SNRPEP10-201ENST00000420249 274 ntBASIC3.44□□□□□ -1.86
HOXC6P09630 AC005517.2-201ENST00000424673 553 ntBASIC3.44□□□□□ -1.86
HOXC6P09630 AC022018.1-201ENST00000430685 241 ntBASIC3.44□□□□□ -1.86
HOXC6P09630 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.44□□□□□ -1.86
HOXC6P09630 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC3.44□□□□□ -1.86
HOXC6P09630 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.44□□□□□ -1.86
HOXC6P09630 HMGB1P25-201ENST00000468402 607 ntBASIC3.44□□□□□ -1.86
HOXC6P09630 AC078785.3-201ENST00000476607 425 ntBASIC3.44□□□□□ -1.86
HOXC6P09630 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.44□□□□□ -1.86
HOXC6P09630 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.44□□□□□ -1.86
HOXC6P09630 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.44□□□□□ -1.86
HOXC6P09630 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.44□□□□□ -1.86
HOXC6P09630 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.44□□□□□ -1.86
HOXC6P09630 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.44□□□□□ -1.86
HOXC6P09630 AP003072.2-201ENST00000527756 676 ntBASIC3.44□□□□□ -1.86
HOXC6P09630 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HOXC6P09630 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.44□□□□□ -1.86
HOXC6P09630 GLYCAM1-201ENST00000546596 285 ntBASIC3.44□□□□□ -1.86
HOXC6P09630 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.44□□□□□ -1.86
HOXC6P09630 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.44□□□□□ -1.86
HOXC6P09630 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.44□□□□□ -1.86
HOXC6P09630 AL138976.2-201ENST00000563989 694 ntBASIC3.44□□□□□ -1.86
HOXC6P09630 HMGB1P6-201ENST00000569046 646 ntBASIC3.44□□□□□ -1.86
HOXC6P09630 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.44□□□□□ -1.86
HOXC6P09630 ATP1B3P1-201ENST00000605365 821 ntBASIC3.44□□□□□ -1.86
HOXC6P09630 AC006504.8-201ENST00000621046 635 ntBASIC3.44□□□□□ -1.86
HOXC6P09630 AC093648.1-201ENST00000623546 606 ntBASIC3.44□□□□□ -1.86
HOXC6P09630 AP003122.6-201ENST00000623831 495 ntBASIC3.44□□□□□ -1.86
HOXC6P09630 AC112487.2-201ENST00000637950 304 ntBASIC3.44□□□□□ -1.86
HOXC6P09630 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.44□□□□□ -1.86
HOXC6P09630 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
HOXC6P09630 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
HOXC6P09630 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
HOXC6P09630 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.43□□□□□ -1.86
HOXC6P09630 AC006020.1-201ENST00000420179 1854 ntBASIC3.43□□□□□ -1.86
HOXC6P09630 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
HOXC6P09630 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
HOXC6P09630 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms