Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC2.51□□□□□ -2.01
MBD3O95983 AL355598.1-201ENST00000604169 202 ntBASIC2.51□□□□□ -2.01
MBD3O95983 OR2AS2P-201ENST00000606902 342 ntBASIC2.51□□□□□ -2.01
MBD3O95983 AL031667.3-201ENST00000620124 655 ntBASIC2.51□□□□□ -2.01
MBD3O95983 MIR7515-201ENST00000637837 67 ntBASIC2.51□□□□□ -2.01
MBD3O95983 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.51□□□□□ -2.01
MBD3O95983 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
MBD3O95983 HSPE1P11-201ENST00000339579 310 ntBASIC2.5□□□□□ -2.01
MBD3O95983 RNA5SP387-201ENST00000364226 106 ntBASIC2.5□□□□□ -2.01
MBD3O95983 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
MBD3O95983 RNU6-1072P-201ENST00000384703 107 ntBASIC2.5□□□□□ -2.01
MBD3O95983 RNU6-443P-201ENST00000384780 107 ntBASIC2.5□□□□□ -2.01
MBD3O95983 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
MBD3O95983 AL021407.1-201ENST00000404531 386 ntBASIC2.5□□□□□ -2.01
MBD3O95983 RNU2-68P-201ENST00000410878 191 ntBASIC2.5□□□□□ -2.01
MBD3O95983 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.5□□□□□ -2.01
MBD3O95983 SKA2P1-201ENST00000425592 390 ntBASIC2.5□□□□□ -2.01
MBD3O95983 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.5□□□□□ -2.01
MBD3O95983 TIMM9P1-201ENST00000436122 256 ntBASIC2.5□□□□□ -2.01
MBD3O95983 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.5□□□□□ -2.01
MBD3O95983 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.5□□□□□ -2.01
MBD3O95983 CECR9-201ENST00000453421 199 ntBASIC2.5□□□□□ -2.01
MBD3O95983 AC233279.1-201ENST00000455300 423 ntBASIC2.5□□□□□ -2.01
MBD3O95983 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.5□□□□□ -2.01
MBD3O95983 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.5□□□□□ -2.01
MBD3O95983 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.5□□□□□ -2.01
MBD3O95983 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.5□□□□□ -2.01
MBD3O95983 RPS29P20-201ENST00000489592 171 ntBASIC2.5□□□□□ -2.01
MBD3O95983 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC2.5□□□□□ -2.01
MBD3O95983 RNU5F-8P-201ENST00000515941 111 ntBASIC2.5□□□□□ -2.01
MBD3O95983 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.5□□□□□ -2.01
MBD3O95983 AC025755.1-201ENST00000521306 278 ntBASIC2.5□□□□□ -2.01
MBD3O95983 NAP1L1P1-201ENST00000524793 1063 ntBASIC2.5□□□□□ -2.01
MBD3O95983 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.5□□□□□ -2.01
MBD3O95983 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
MBD3O95983 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC2.5□□□□□ -2.01
MBD3O95983 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.5□□□□□ -2.01
MBD3O95983 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.5□□□□□ -2.01
MBD3O95983 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.5□□□□□ -2.01
MBD3O95983 LRRC37A5P-203ENST00000580181 585 ntBASIC2.5□□□□□ -2.01
MBD3O95983 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.5□□□□□ -2.01
MBD3O95983 MIR4658-201ENST00000584344 65 ntBASIC2.5□□□□□ -2.01
MBD3O95983 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.5□□□□□ -2.01
MBD3O95983 OR10AB1P-201ENST00000609613 938 ntBASIC2.5□□□□□ -2.01
MBD3O95983 AC090970.3-201ENST00000612566 866 ntBASIC2.5□□□□□ -2.01
MBD3O95983 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.5□□□□□ -2.01
MBD3O95983 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.5□□□□□ -2.01
MBD3O95983 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.5□□□□□ -2.01
MBD3O95983 AL139276.1-201ENST00000311910 1001 ntBASIC2.49□□□□□ -2.01
MBD3O95983 SNORA72.3-201ENST00000365074 132 ntBASIC2.49□□□□□ -2.01
MBD3O95983 SNORA70.4-201ENST00000365509 134 ntBASIC2.49□□□□□ -2.01
MBD3O95983 TAS2R15P-201ENST00000390674 928 ntBASIC2.49□□□□□ -2.01
MBD3O95983 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.49□□□□□ -2.01
MBD3O95983 RNU2-62P-201ENST00000410868 191 ntBASIC2.49□□□□□ -2.01
MBD3O95983 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.49□□□□□ -2.01
MBD3O95983 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.49□□□□□ -2.01
MBD3O95983 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.49□□□□□ -2.01
MBD3O95983 DNAJA1P2-201ENST00000421360 1197 ntBASIC2.49□□□□□ -2.01
MBD3O95983 SUMO1P4-201ENST00000429430 302 ntBASIC2.49□□□□□ -2.01
MBD3O95983 MED14P1-201ENST00000430517 648 ntBASIC2.49□□□□□ -2.01
MBD3O95983 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC2.49□□□□□ -2.01
MBD3O95983 GPM6BP2-201ENST00000432046 144 ntBASIC2.49□□□□□ -2.01
MBD3O95983 MICF-203ENST00000432679 129 ntBASIC2.49□□□□□ -2.01
MBD3O95983 AC010153.1-201ENST00000432862 727 ntBASIC2.49□□□□□ -2.01
MBD3O95983 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC2.49□□□□□ -2.01
MBD3O95983 Z80107.1-201ENST00000436830 412 ntBASIC2.49□□□□□ -2.01
MBD3O95983 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.49□□□□□ -2.01
MBD3O95983 GPM6BP1-201ENST00000446387 144 ntBASIC2.49□□□□□ -2.01
MBD3O95983 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC2.49□□□□□ -2.01
MBD3O95983 RPL37P6-201ENST00000460682 294 ntBASIC2.49□□□□□ -2.01
MBD3O95983 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC2.49□□□□□ -2.01
MBD3O95983 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC2.49□□□□□ -2.01
MBD3O95983 RNA5SP200-201ENST00000516360 103 ntBASIC2.49□□□□□ -2.01
MBD3O95983 SNORD19.2-201ENST00000516978 73 ntBASIC2.49□□□□□ -2.01
MBD3O95983 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.49□□□□□ -2.01
MBD3O95983 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.49□□□□□ -2.01
MBD3O95983 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.49□□□□□ -2.01
MBD3O95983 GTF3AP2-201ENST00000557014 266 ntBASIC2.49□□□□□ -2.01
MBD3O95983 AC007151.1-201ENST00000572774 483 ntBASIC2.49□□□□□ -2.01
MBD3O95983 SNORD53-201ENST00000579969 78 ntBASIC2.49□□□□□ -2.01
MBD3O95983 MIR5694-201ENST00000581190 76 ntBASIC2.49□□□□□ -2.01
MBD3O95983 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2.49□□□□□ -2.01
MBD3O95983 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.49□□□□□ -2.01
MBD3O95983 AP000403.1-201ENST00000603349 851 ntBASIC2.49□□□□□ -2.01
MBD3O95983 AP000811.1-201ENST00000603803 651 ntBASIC2.49□□□□□ -2.01
MBD3O95983 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC2.49□□□□□ -2.01
MBD3O95983 AL607023.1-201ENST00000620045 248 ntBASIC2.49□□□□□ -2.01
MBD3O95983 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
MBD3O95983 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
MBD3O95983 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.49□□□□□ -2.01
MBD3O95983 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
MBD3O95983 RNU4-52P-201ENST00000384209 138 ntBASIC2.48□□□□□ -2.01
MBD3O95983 RNU6-253P-201ENST00000384730 105 ntBASIC2.48□□□□□ -2.01
MBD3O95983 U3.26-201ENST00000391236 204 ntBASIC2.48□□□□□ -2.01
MBD3O95983 AC119751.3-201ENST00000399720 670 ntBASIC2.48□□□□□ -2.01
MBD3O95983 RPS4XP7-201ENST00000406274 780 ntBASIC2.48□□□□□ -2.01
MBD3O95983 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.48□□□□□ -2.01
MBD3O95983 MTCO3P30-201ENST00000426425 670 ntBASIC2.48□□□□□ -2.01
MBD3O95983 HMGB1P27-201ENST00000431429 603 ntBASIC2.48□□□□□ -2.01
MBD3O95983 AL354941.1-201ENST00000438600 464 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms