Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 HMGB1P27-201ENST00000431429 603 ntBASIC5.19□□□□□ -1.58
GFRA3O60609 AC245047.4-201ENST00000433189 144 ntBASIC5.19□□□□□ -1.58
GFRA3O60609 RPL23AP83-201ENST00000434984 473 ntBASIC5.19□□□□□ -1.58
GFRA3O60609 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC5.19□□□□□ -1.58
GFRA3O60609 AC010095.1-201ENST00000443543 144 ntBASIC5.19□□□□□ -1.58
GFRA3O60609 HMGB3P8-201ENST00000449709 577 ntBASIC5.19□□□□□ -1.58
GFRA3O60609 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC5.19□□□□□ -1.58
GFRA3O60609 AC146507.2-201ENST00000460608 476 ntBASIC5.19□□□□□ -1.58
GFRA3O60609 AC109327.1-201ENST00000471666 403 ntBASIC5.19□□□□□ -1.58
GFRA3O60609 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.19□□□□□ -1.58
GFRA3O60609 RNU6-1018P-201ENST00000516577 106 ntBASIC5.19□□□□□ -1.58
GFRA3O60609 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.19□□□□□ -1.58
GFRA3O60609 POT1-202ENST00000393329 3950 ntTSL 5 BASIC5.19□□□□□ -1.58
GFRA3O60609 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
GFRA3O60609 TLK1P1-201ENST00000456760 2440 ntBASIC5.19□□□□□ -1.58
GFRA3O60609 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.19□□□□□ -1.58
GFRA3O60609 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
GFRA3O60609 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC5.19□□□□□ -1.58
GFRA3O60609 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.19□□□□□ -1.58
GFRA3O60609 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
GFRA3O60609 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.19□□□□□ -1.58
GFRA3O60609 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.19□□□□□ -1.58
GFRA3O60609 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
GFRA3O60609 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
GFRA3O60609 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
GFRA3O60609 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
GFRA3O60609 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
GFRA3O60609 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
GFRA3O60609 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.18□□□□□ -1.58
GFRA3O60609 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.18□□□□□ -1.58
GFRA3O60609 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.18□□□□□ -1.58
GFRA3O60609 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
GFRA3O60609 RNA5SP191-201ENST00000362585 102 ntBASIC5.18□□□□□ -1.58
GFRA3O60609 RNU6-776P-201ENST00000364403 104 ntBASIC5.18□□□□□ -1.58
GFRA3O60609 RNA5SP125-201ENST00000364843 120 ntBASIC5.18□□□□□ -1.58
GFRA3O60609 RNU6-1022P-201ENST00000365049 104 ntBASIC5.18□□□□□ -1.58
GFRA3O60609 RNU6-1276P-201ENST00000365372 104 ntBASIC5.18□□□□□ -1.58
GFRA3O60609 SNORA70.9-201ENST00000384370 135 ntBASIC5.18□□□□□ -1.58
GFRA3O60609 AL603914.1-201ENST00000401964 204 ntBASIC5.18□□□□□ -1.58
GFRA3O60609 AL355497.1-201ENST00000406262 551 ntBASIC5.18□□□□□ -1.58
GFRA3O60609 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC5.18□□□□□ -1.58
GFRA3O60609 AL592045.1-201ENST00000429867 352 ntBASIC5.18□□□□□ -1.58
GFRA3O60609 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.18□□□□□ -1.58
GFRA3O60609 RPL30P11-203ENST00000598995 310 ntBASIC5.18□□□□□ -1.58
GFRA3O60609 MIR4662A-201ENST00000637499 67 ntBASIC5.18□□□□□ -1.58
GFRA3O60609 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC5.18□□□□□ -1.58
GFRA3O60609 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC5.18□□□□□ -1.58
GFRA3O60609 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
GFRA3O60609 AC009541.1-201ENST00000438279 2662 ntBASIC5.18□□□□□ -1.58
GFRA3O60609 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC5.18□□□□□ -1.58
GFRA3O60609 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
GFRA3O60609 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
GFRA3O60609 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC5.17□□□□□ -1.58
GFRA3O60609 A2MP1-204ENST00000566278 4130 ntBASIC5.17□□□□□ -1.58
GFRA3O60609 SCARNA15-201ENST00000607520 4325 ntBASIC5.17□□□□□ -1.58
GFRA3O60609 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
GFRA3O60609 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
GFRA3O60609 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
GFRA3O60609 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC5.17□□□□□ -1.58
GFRA3O60609 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
GFRA3O60609 RNU6-137P-201ENST00000363680 108 ntBASIC5.17□□□□□ -1.58
GFRA3O60609 SNORA72-201ENST00000384339 132 ntBASIC5.17□□□□□ -1.58
GFRA3O60609 MIR487A-201ENST00000385009 80 ntBASIC5.17□□□□□ -1.58
GFRA3O60609 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
GFRA3O60609 RNU2-32P-201ENST00000411193 191 ntBASIC5.17□□□□□ -1.58
GFRA3O60609 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.17□□□□□ -1.58
GFRA3O60609 AC022022.1-201ENST00000430304 178 ntBASIC5.17□□□□□ -1.58
GFRA3O60609 RPL12P46-201ENST00000436610 195 ntBASIC5.17□□□□□ -1.58
GFRA3O60609 AC010531.2-201ENST00000465012 153 ntBASIC5.17□□□□□ -1.58
GFRA3O60609 RPL39P34-201ENST00000477141 156 ntBASIC5.17□□□□□ -1.58
GFRA3O60609 RNU6-58P-201ENST00000517143 103 ntBASIC5.17□□□□□ -1.58
GFRA3O60609 AC103783.1-201ENST00000520506 373 ntBASIC5.17□□□□□ -1.58
GFRA3O60609 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC5.17□□□□□ -1.58
GFRA3O60609 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC5.17□□□□□ -1.58
GFRA3O60609 OR4H12P-201ENST00000556269 907 ntBASIC5.17□□□□□ -1.58
GFRA3O60609 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.17□□□□□ -1.58
GFRA3O60609 AL157871.3-201ENST00000557231 293 ntBASIC5.17□□□□□ -1.58
GFRA3O60609 MIR5688-201ENST00000580619 83 ntBASIC5.17□□□□□ -1.58
GFRA3O60609 MIR132-201ENST00000591554 101 ntBASIC5.17□□□□□ -1.58
GFRA3O60609 MIR6130-201ENST00000619419 109 ntBASIC5.17□□□□□ -1.58
GFRA3O60609 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
GFRA3O60609 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC5.17□□□□□ -1.58
GFRA3O60609 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
GFRA3O60609 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
GFRA3O60609 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
GFRA3O60609 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
GFRA3O60609 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
GFRA3O60609 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
GFRA3O60609 OR52B5P-204ENST00000641744 3467 ntBASIC5.17□□□□□ -1.58
GFRA3O60609 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.16□□□□□ -1.58
GFRA3O60609 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
GFRA3O60609 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
GFRA3O60609 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
GFRA3O60609 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC5.16□□□□□ -1.58
GFRA3O60609 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
GFRA3O60609 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
GFRA3O60609 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
GFRA3O60609 RNA5SP28-201ENST00000363841 119 ntBASIC5.16□□□□□ -1.58
GFRA3O60609 RN7SKP224-201ENST00000364140 325 ntBASIC5.16□□□□□ -1.58
GFRA3O60609 RNU6-309P-201ENST00000364573 106 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms