Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 Y_RNA.625-201ENST00000411256 107 ntBASIC4.82□□□□□ -1.64
RNF223E7ERA6 AC019205.3-201ENST00000424573 156 ntBASIC4.82□□□□□ -1.64
RNF223E7ERA6 AL590383.1-201ENST00000428602 75 ntBASIC4.82□□□□□ -1.64
RNF223E7ERA6 AL663074.2-201ENST00000440621 479 ntBASIC4.82□□□□□ -1.64
RNF223E7ERA6 RN7SL329P-201ENST00000467740 299 ntBASIC4.82□□□□□ -1.64
RNF223E7ERA6 RNA5SP154-201ENST00000516193 111 ntBASIC4.82□□□□□ -1.64
RNF223E7ERA6 SNORA31.23-201ENST00000517219 133 ntBASIC4.82□□□□□ -1.64
RNF223E7ERA6 AC021678.3-201ENST00000517893 476 ntBASIC4.82□□□□□ -1.64
RNF223E7ERA6 CKS1BP7-201ENST00000522230 235 ntBASIC4.82□□□□□ -1.64
RNF223E7ERA6 RN7SL356P-201ENST00000582228 248 ntBASIC4.82□□□□□ -1.64
RNF223E7ERA6 AC025754.2-201ENST00000606491 432 ntBASIC4.82□□□□□ -1.64
RNF223E7ERA6 MIR548AY-201ENST00000617669 107 ntBASIC4.82□□□□□ -1.64
RNF223E7ERA6 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
RNF223E7ERA6 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RNF223E7ERA6 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC4.82□□□□□ -1.64
RNF223E7ERA6 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC4.82□□□□□ -1.64
RNF223E7ERA6 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
RNF223E7ERA6 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RNF223E7ERA6 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
RNF223E7ERA6 POT1-202ENST00000393329 3950 ntTSL 5 BASIC4.82□□□□□ -1.64
RNF223E7ERA6 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RNF223E7ERA6 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RNF223E7ERA6 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
RNF223E7ERA6 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RNF223E7ERA6 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
RNF223E7ERA6 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RNF223E7ERA6 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
RNF223E7ERA6 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RNF223E7ERA6 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC4.81□□□□□ -1.64
RNF223E7ERA6 AL731532.1-201ENST00000623972 4236 ntBASIC4.81□□□□□ -1.64
RNF223E7ERA6 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RNF223E7ERA6 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RNF223E7ERA6 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
RNF223E7ERA6 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RNF223E7ERA6 AC068769.1-201ENST00000474767 2426 ntBASIC4.81□□□□□ -1.64
RNF223E7ERA6 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
RNF223E7ERA6 AC092681.1-201ENST00000297369 291 ntBASIC4.81□□□□□ -1.64
RNF223E7ERA6 RNU1-100P-201ENST00000365255 165 ntBASIC4.81□□□□□ -1.64
RNF223E7ERA6 RNU6-1080P-201ENST00000383982 107 ntBASIC4.81□□□□□ -1.64
RNF223E7ERA6 RNY1P7-201ENST00000384743 110 ntBASIC4.81□□□□□ -1.64
RNF223E7ERA6 AL645927.1-201ENST00000396783 406 ntBASIC4.81□□□□□ -1.64
RNF223E7ERA6 HMGA1P8-201ENST00000414130 321 ntBASIC4.81□□□□□ -1.64
RNF223E7ERA6 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC4.81□□□□□ -1.64
RNF223E7ERA6 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC4.81□□□□□ -1.64
RNF223E7ERA6 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
RNF223E7ERA6 RPL12P3-201ENST00000440080 396 ntBASIC4.81□□□□□ -1.64
RNF223E7ERA6 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC4.81□□□□□ -1.64
RNF223E7ERA6 RN7SL583P-201ENST00000475692 287 ntBASIC4.81□□□□□ -1.64
RNF223E7ERA6 RN7SL808P-201ENST00000496066 299 ntBASIC4.81□□□□□ -1.64
RNF223E7ERA6 RNA5SP281-201ENST00000516504 135 ntBASIC4.81□□□□□ -1.64
RNF223E7ERA6 SNORA31.16-201ENST00000516773 139 ntBASIC4.81□□□□□ -1.64
RNF223E7ERA6 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
RNF223E7ERA6 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.81□□□□□ -1.64
RNF223E7ERA6 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.81□□□□□ -1.64
RNF223E7ERA6 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.81□□□□□ -1.64
RNF223E7ERA6 AL160236.1-201ENST00000556317 195 ntBASIC4.81□□□□□ -1.64
RNF223E7ERA6 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC4.81□□□□□ -1.64
RNF223E7ERA6 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.81□□□□□ -1.64
RNF223E7ERA6 RMST_8.1-201ENST00000610287 165 ntBASIC4.81□□□□□ -1.64
RNF223E7ERA6 TCL6_3.1-201ENST00000619064 137 ntBASIC4.81□□□□□ -1.64
RNF223E7ERA6 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
RNF223E7ERA6 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
RNF223E7ERA6 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.81□□□□□ -1.64
RNF223E7ERA6 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RNF223E7ERA6 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RNF223E7ERA6 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RNF223E7ERA6 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
RNF223E7ERA6 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC4.8□□□□□ -1.64
RNF223E7ERA6 DMD-222ENST00000474231 5209 ntTSL 5 BASIC4.8□□□□□ -1.64
RNF223E7ERA6 AL159987.1-201ENST00000347911 293 ntBASIC4.8□□□□□ -1.64
RNF223E7ERA6 SNORA70H-201ENST00000383910 135 ntBASIC4.8□□□□□ -1.64
RNF223E7ERA6 SNORA70J-201ENST00000384182 135 ntBASIC4.8□□□□□ -1.64
RNF223E7ERA6 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
RNF223E7ERA6 RNU2-55P-201ENST00000411146 174 ntBASIC4.8□□□□□ -1.64
RNF223E7ERA6 MYL6P5-201ENST00000412707 459 ntBASIC4.8□□□□□ -1.64
RNF223E7ERA6 RPL23AP27-201ENST00000415161 451 ntBASIC4.8□□□□□ -1.64
RNF223E7ERA6 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4.8□□□□□ -1.64
RNF223E7ERA6 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC4.8□□□□□ -1.64
RNF223E7ERA6 RPS12P17-201ENST00000438591 377 ntBASIC4.8□□□□□ -1.64
RNF223E7ERA6 RPSAP50-201ENST00000481955 852 ntBASIC4.8□□□□□ -1.64
RNF223E7ERA6 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC4.8□□□□□ -1.64
RNF223E7ERA6 AC117454.1-201ENST00000491120 168 ntBASIC4.8□□□□□ -1.64
RNF223E7ERA6 SNORA70.12-201ENST00000516084 153 ntBASIC4.8□□□□□ -1.64
RNF223E7ERA6 RNA5SP116-201ENST00000516132 98 ntBASIC4.8□□□□□ -1.64
RNF223E7ERA6 HMGN2P6-201ENST00000551091 273 ntBASIC4.8□□□□□ -1.64
RNF223E7ERA6 MRPS21P7-201ENST00000566937 238 ntBASIC4.8□□□□□ -1.64
RNF223E7ERA6 AL137843.1-201ENST00000605078 385 ntBASIC4.8□□□□□ -1.64
RNF223E7ERA6 Mico1.1-201ENST00000611698 204 ntBASIC4.8□□□□□ -1.64
RNF223E7ERA6 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
RNF223E7ERA6 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC4.8□□□□□ -1.64
RNF223E7ERA6 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RNF223E7ERA6 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RNF223E7ERA6 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RNF223E7ERA6 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC4.8□□□□□ -1.64
RNF223E7ERA6 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RNF223E7ERA6 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
RNF223E7ERA6 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RNF223E7ERA6 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
RNF223E7ERA6 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC4.8□□□□□ -1.64
RNF223E7ERA6 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms