Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 RNA5SP476-201ENST00000516613 103 ntBASIC1.22□□□□□ -2.21
COL6A6A6NMZ7 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC1.22□□□□□ -2.21
COL6A6A6NMZ7 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.22□□□□□ -2.21
COL6A6A6NMZ7 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC1.22□□□□□ -2.21
COL6A6A6NMZ7 SLC2A13P1-201ENST00000531560 322 ntBASIC1.22□□□□□ -2.21
COL6A6A6NMZ7 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC1.22□□□□□ -2.21
COL6A6A6NMZ7 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC1.22□□□□□ -2.21
COL6A6A6NMZ7 AL138976.2-201ENST00000563989 694 ntBASIC1.22□□□□□ -2.21
COL6A6A6NMZ7 LARP7P2-201ENST00000575306 125 ntBASIC1.22□□□□□ -2.21
COL6A6A6NMZ7 AC073413.2-201ENST00000604332 360 ntBASIC1.22□□□□□ -2.21
COL6A6A6NMZ7 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC1.22□□□□□ -2.21
COL6A6A6NMZ7 AC011330.2-201ENST00000621680 635 ntBASIC1.22□□□□□ -2.21
COL6A6A6NMZ7 AP000676.4-201ENST00000624659 623 ntBASIC1.22□□□□□ -2.21
COL6A6A6NMZ7 AL159972.1-201ENST00000625150 448 ntBASIC1.22□□□□□ -2.21
COL6A6A6NMZ7 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC1.22□□□□□ -2.21
COL6A6A6NMZ7 RNU6-1249P-201ENST00000363237 111 ntBASIC1.22□□□□□ -2.21
COL6A6A6NMZ7 SNORA14A-201ENST00000364773 135 ntBASIC1.22□□□□□ -2.21
COL6A6A6NMZ7 RNU6-441P-201ENST00000384545 106 ntBASIC1.22□□□□□ -2.21
COL6A6A6NMZ7 MIR520E-201ENST00000384867 87 ntBASIC1.22□□□□□ -2.21
COL6A6A6NMZ7 RNU6-1300P-201ENST00000391046 108 ntBASIC1.22□□□□□ -2.21
COL6A6A6NMZ7 AL138880.1-201ENST00000405824 642 ntBASIC1.22□□□□□ -2.21
COL6A6A6NMZ7 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
COL6A6A6NMZ7 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC1.22□□□□□ -2.21
COL6A6A6NMZ7 USP9YP22-201ENST00000438971 294 ntBASIC1.22□□□□□ -2.21
COL6A6A6NMZ7 AC104073.1-201ENST00000451988 151 ntBASIC1.22□□□□□ -2.21
COL6A6A6NMZ7 COX7A2P2-201ENST00000505291 250 ntBASIC1.22□□□□□ -2.21
COL6A6A6NMZ7 HMGB1P22-201ENST00000505315 124 ntBASIC1.22□□□□□ -2.21
COL6A6A6NMZ7 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC1.22□□□□□ -2.21
COL6A6A6NMZ7 AC008837.2-201ENST00000513076 418 ntBASIC1.22□□□□□ -2.21
COL6A6A6NMZ7 AC021451.1-201ENST00000523498 1129 ntBASIC1.22□□□□□ -2.21
COL6A6A6NMZ7 AC005832.3-201ENST00000537929 631 ntBASIC1.22□□□□□ -2.21
COL6A6A6NMZ7 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC1.22□□□□□ -2.21
COL6A6A6NMZ7 DUXAP11-201ENST00000603858 526 ntBASIC1.22□□□□□ -2.21
COL6A6A6NMZ7 AL031176.1-201ENST00000604554 466 ntBASIC1.22□□□□□ -2.21
COL6A6A6NMZ7 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC1.22□□□□□ -2.21
COL6A6A6NMZ7 AC084824.4-201ENST00000620106 731 ntBASIC1.22□□□□□ -2.21
COL6A6A6NMZ7 AP002782.1-201ENST00000623107 614 ntBASIC1.22□□□□□ -2.21
COL6A6A6NMZ7 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC1.22□□□□□ -2.21
COL6A6A6NMZ7 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC1.22□□□□□ -2.21
COL6A6A6NMZ7 SDAD1P2-201ENST00000441308 2028 ntBASIC1.21□□□□□ -2.22
COL6A6A6NMZ7 ZNF519P1-201ENST00000449011 1626 ntBASIC1.21□□□□□ -2.22
COL6A6A6NMZ7 DDX43P2-201ENST00000604753 1354 ntBASIC1.21□□□□□ -2.22
COL6A6A6NMZ7 RNU6-492P-201ENST00000363035 104 ntBASIC1.21□□□□□ -2.22
COL6A6A6NMZ7 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
COL6A6A6NMZ7 RPL22P22-201ENST00000395439 379 ntBASIC1.21□□□□□ -2.22
COL6A6A6NMZ7 SUMO1P4-201ENST00000429430 302 ntBASIC1.21□□□□□ -2.22
COL6A6A6NMZ7 MTCYBP11-201ENST00000447254 1109 ntBASIC1.21□□□□□ -2.22
COL6A6A6NMZ7 AC026414.1-201ENST00000504046 698 ntBASIC1.21□□□□□ -2.22
COL6A6A6NMZ7 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC1.21□□□□□ -2.22
COL6A6A6NMZ7 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC1.21□□□□□ -2.22
COL6A6A6NMZ7 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC1.21□□□□□ -2.22
COL6A6A6NMZ7 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC1.21□□□□□ -2.22
COL6A6A6NMZ7 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC1.21□□□□□ -2.22
COL6A6A6NMZ7 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC1.21□□□□□ -2.22
COL6A6A6NMZ7 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC1.21□□□□□ -2.22
COL6A6A6NMZ7 AC090079.2-201ENST00000575289 768 ntBASIC1.21□□□□□ -2.22
COL6A6A6NMZ7 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC1.21□□□□□ -2.22
COL6A6A6NMZ7 AL031274.2-201ENST00000599419 203 ntBASIC1.21□□□□□ -2.22
COL6A6A6NMZ7 AC008962.1-201ENST00000605729 304 ntBASIC1.21□□□□□ -2.22
COL6A6A6NMZ7 AL158163.2-201ENST00000619110 700 ntBASIC1.21□□□□□ -2.22
COL6A6A6NMZ7 AC231657.1-201ENST00000624313 397 ntBASIC1.21□□□□□ -2.22
COL6A6A6NMZ7 AC099786.3-201ENST00000565735 1410 ntBASIC1.21□□□□□ -2.22
COL6A6A6NMZ7 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
COL6A6A6NMZ7 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
COL6A6A6NMZ7 RNU6-353P-201ENST00000364266 108 ntBASIC1.2□□□□□ -2.22
COL6A6A6NMZ7 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
COL6A6A6NMZ7 RNU6-657P-201ENST00000383904 107 ntBASIC1.2□□□□□ -2.22
COL6A6A6NMZ7 RNU4-52P-201ENST00000384209 138 ntBASIC1.2□□□□□ -2.22
COL6A6A6NMZ7 RNU6-925P-201ENST00000384629 104 ntBASIC1.2□□□□□ -2.22
COL6A6A6NMZ7 MIR217-201ENST00000384817 110 ntBASIC1.2□□□□□ -2.22
COL6A6A6NMZ7 MIR767-201ENST00000390228 109 ntBASIC1.2□□□□□ -2.22
COL6A6A6NMZ7 MTCO3P12-201ENST00000416718 547 ntBASIC1.2□□□□□ -2.22
COL6A6A6NMZ7 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.2□□□□□ -2.22
COL6A6A6NMZ7 HMGN2P30-201ENST00000423237 256 ntBASIC1.2□□□□□ -2.22
COL6A6A6NMZ7 AC092047.1-201ENST00000424997 240 ntBASIC1.2□□□□□ -2.22
COL6A6A6NMZ7 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC1.2□□□□□ -2.22
COL6A6A6NMZ7 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
COL6A6A6NMZ7 EEF1A1P39-201ENST00000440791 250 ntBASIC1.2□□□□□ -2.22
COL6A6A6NMZ7 BMI1P1-201ENST00000445879 941 ntBASIC1.2□□□□□ -2.22
COL6A6A6NMZ7 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC1.2□□□□□ -2.22
COL6A6A6NMZ7 AC015908.1-201ENST00000478739 476 ntBASIC1.2□□□□□ -2.22
COL6A6A6NMZ7 AC016550.1-201ENST00000505348 785 ntBASIC1.2□□□□□ -2.22
COL6A6A6NMZ7 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.2□□□□□ -2.22
COL6A6A6NMZ7 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
COL6A6A6NMZ7 AC023632.1-201ENST00000518463 375 ntBASIC1.2□□□□□ -2.22
COL6A6A6NMZ7 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.2□□□□□ -2.22
COL6A6A6NMZ7 AC022690.1-201ENST00000526681 550 ntBASIC1.2□□□□□ -2.22
COL6A6A6NMZ7 CR383656.8-201ENST00000549046 145 ntBASIC1.2□□□□□ -2.22
COL6A6A6NMZ7 AC122134.1-202ENST00000569111 1201 ntBASIC1.2□□□□□ -2.22
COL6A6A6NMZ7 AC113194.1-201ENST00000606037 500 ntBASIC1.2□□□□□ -2.22
COL6A6A6NMZ7 AC080013.4-201ENST00000607624 649 ntBASIC1.2□□□□□ -2.22
COL6A6A6NMZ7 AC097504.2-201ENST00000608088 454 ntBASIC1.2□□□□□ -2.22
COL6A6A6NMZ7 AL121652.1-201ENST00000608851 448 ntBASIC1.2□□□□□ -2.22
COL6A6A6NMZ7 AC008083.4-201ENST00000615076 444 ntBASIC1.2□□□□□ -2.22
COL6A6A6NMZ7 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.2□□□□□ -2.22
COL6A6A6NMZ7 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.2□□□□□ -2.22
COL6A6A6NMZ7 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC1.2□□□□□ -2.22
COL6A6A6NMZ7 AL445984.1-201ENST00000637834 659 ntBASIC1.2□□□□□ -2.22
COL6A6A6NMZ7 AC099654.7-201ENST00000635788 2127 ntBASIC1.2□□□□□ -2.22
COL6A6A6NMZ7 AC107982.1-201ENST00000507171 1300 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms