Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC2.62□□□□□ -1.99
TRBV5-4A0A0C4DH59 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
TRBV5-4A0A0C4DH59 RNU6-1077P-201ENST00000410506 102 ntBASIC2.62□□□□□ -1.99
TRBV5-4A0A0C4DH59 RNA5SP344-201ENST00000411081 104 ntBASIC2.62□□□□□ -1.99
TRBV5-4A0A0C4DH59 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.62□□□□□ -1.99
TRBV5-4A0A0C4DH59 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.62□□□□□ -1.99
TRBV5-4A0A0C4DH59 AC092047.1-201ENST00000424997 240 ntBASIC2.62□□□□□ -1.99
TRBV5-4A0A0C4DH59 AC093151.1-201ENST00000427711 313 ntBASIC2.62□□□□□ -1.99
TRBV5-4A0A0C4DH59 RPL31P35-201ENST00000431058 377 ntBASIC2.62□□□□□ -1.99
TRBV5-4A0A0C4DH59 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC2.62□□□□□ -1.99
TRBV5-4A0A0C4DH59 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.62□□□□□ -1.99
TRBV5-4A0A0C4DH59 PIGFP3-201ENST00000441918 722 ntBASIC2.62□□□□□ -1.99
TRBV5-4A0A0C4DH59 NEFMP1-201ENST00000443423 1006 ntBASIC2.62□□□□□ -1.99
TRBV5-4A0A0C4DH59 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC2.62□□□□□ -1.99
TRBV5-4A0A0C4DH59 GSTA11P-201ENST00000452866 669 ntBASIC2.62□□□□□ -1.99
TRBV5-4A0A0C4DH59 RPL37P6-201ENST00000460682 294 ntBASIC2.62□□□□□ -1.99
TRBV5-4A0A0C4DH59 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.62□□□□□ -1.99
TRBV5-4A0A0C4DH59 KC877373.1-201ENST00000479066 408 ntBASIC2.62□□□□□ -1.99
TRBV5-4A0A0C4DH59 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
TRBV5-4A0A0C4DH59 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.62□□□□□ -1.99
TRBV5-4A0A0C4DH59 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.62□□□□□ -1.99
TRBV5-4A0A0C4DH59 RNU6-430P-201ENST00000517078 107 ntBASIC2.62□□□□□ -1.99
TRBV5-4A0A0C4DH59 SNORA31.21-201ENST00000517180 77 ntBASIC2.62□□□□□ -1.99
TRBV5-4A0A0C4DH59 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.62□□□□□ -1.99
TRBV5-4A0A0C4DH59 HMGB1P41-201ENST00000520234 440 ntBASIC2.62□□□□□ -1.99
TRBV5-4A0A0C4DH59 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC2.62□□□□□ -1.99
TRBV5-4A0A0C4DH59 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.62□□□□□ -1.99
TRBV5-4A0A0C4DH59 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.62□□□□□ -1.99
TRBV5-4A0A0C4DH59 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.62□□□□□ -1.99
TRBV5-4A0A0C4DH59 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.62□□□□□ -1.99
TRBV5-4A0A0C4DH59 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.62□□□□□ -1.99
TRBV5-4A0A0C4DH59 HMGB1P6-201ENST00000569046 646 ntBASIC2.62□□□□□ -1.99
TRBV5-4A0A0C4DH59 AL391840.1-201ENST00000571144 367 ntBASIC2.62□□□□□ -1.99
TRBV5-4A0A0C4DH59 AC103987.3-201ENST00000582071 292 ntBASIC2.62□□□□□ -1.99
TRBV5-4A0A0C4DH59 MIR3609-201ENST00000582661 80 ntBASIC2.62□□□□□ -1.99
TRBV5-4A0A0C4DH59 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.62□□□□□ -1.99
TRBV5-4A0A0C4DH59 GLUD1P4-201ENST00000590914 418 ntBASIC2.62□□□□□ -1.99
TRBV5-4A0A0C4DH59 AC087683.1-201ENST00000591187 441 ntBASIC2.62□□□□□ -1.99
TRBV5-4A0A0C4DH59 AC079089.3-201ENST00000603094 673 ntBASIC2.62□□□□□ -1.99
TRBV5-4A0A0C4DH59 AC073648.5-201ENST00000603502 305 ntBASIC2.62□□□□□ -1.99
TRBV5-4A0A0C4DH59 AL161729.4-201ENST00000604650 476 ntBASIC2.62□□□□□ -1.99
TRBV5-4A0A0C4DH59 AC104073.3-201ENST00000610942 955 ntBASIC2.62□□□□□ -1.99
TRBV5-4A0A0C4DH59 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.62□□□□□ -1.99
TRBV5-4A0A0C4DH59 AC005332.10-201ENST00000612725 619 ntBASIC2.62□□□□□ -1.99
TRBV5-4A0A0C4DH59 AC091834.1-201ENST00000614543 472 ntBASIC2.62□□□□□ -1.99
TRBV5-4A0A0C4DH59 AL589994.2-201ENST00000621124 579 ntBASIC2.62□□□□□ -1.99
TRBV5-4A0A0C4DH59 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.62□□□□□ -1.99
TRBV5-4A0A0C4DH59 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.62□□□□□ -1.99
TRBV5-4A0A0C4DH59 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
TRBV5-4A0A0C4DH59 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
TRBV5-4A0A0C4DH59 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
TRBV5-4A0A0C4DH59 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.62□□□□□ -1.99
TRBV5-4A0A0C4DH59 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
TRBV5-4A0A0C4DH59 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.61□□□□□ -1.99
TRBV5-4A0A0C4DH59 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.61□□□□□ -1.99
TRBV5-4A0A0C4DH59 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
TRBV5-4A0A0C4DH59 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.61□□□□□ -1.99
TRBV5-4A0A0C4DH59 AC092435.3-201ENST00000565538 3654 ntBASIC2.61□□□□□ -1.99
TRBV5-4A0A0C4DH59 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
TRBV5-4A0A0C4DH59 RNU6-7-201ENST00000364784 107 ntBASIC2.61□□□□□ -1.99
TRBV5-4A0A0C4DH59 RNU6-8-201ENST00000365467 107 ntBASIC2.61□□□□□ -1.99
TRBV5-4A0A0C4DH59 SNORD21-201ENST00000383953 95 ntBASIC2.61□□□□□ -1.99
TRBV5-4A0A0C4DH59 MIR558-201ENST00000384920 94 ntBASIC2.61□□□□□ -1.99
TRBV5-4A0A0C4DH59 NDUFB4P4-201ENST00000404822 243 ntBASIC2.61□□□□□ -1.99
TRBV5-4A0A0C4DH59 RN7SKP123-201ENST00000410732 291 ntBASIC2.61□□□□□ -1.99
TRBV5-4A0A0C4DH59 RNA5SP38-201ENST00000410750 119 ntBASIC2.61□□□□□ -1.99
TRBV5-4A0A0C4DH59 AL139281.1-201ENST00000422120 335 ntBASIC2.61□□□□□ -1.99
TRBV5-4A0A0C4DH59 MED13P1-201ENST00000428342 171 ntBASIC2.61□□□□□ -1.99
TRBV5-4A0A0C4DH59 VN1R108P-201ENST00000431580 830 ntBASIC2.61□□□□□ -1.99
TRBV5-4A0A0C4DH59 BNIP3P2-201ENST00000441221 577 ntBASIC2.61□□□□□ -1.99
TRBV5-4A0A0C4DH59 RNU6-953P-201ENST00000459154 107 ntBASIC2.61□□□□□ -1.99
TRBV5-4A0A0C4DH59 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.61□□□□□ -1.99
TRBV5-4A0A0C4DH59 AC004924.1-201ENST00000480160 781 ntBASIC2.61□□□□□ -1.99
TRBV5-4A0A0C4DH59 RNA5SP356-201ENST00000515972 94 ntBASIC2.61□□□□□ -1.99
TRBV5-4A0A0C4DH59 SNORA31.1-201ENST00000515993 133 ntBASIC2.61□□□□□ -1.99
TRBV5-4A0A0C4DH59 SNORA31.5-201ENST00000516190 133 ntBASIC2.61□□□□□ -1.99
TRBV5-4A0A0C4DH59 RNU6-405P-201ENST00000516637 110 ntBASIC2.61□□□□□ -1.99
TRBV5-4A0A0C4DH59 AP003072.2-201ENST00000527756 676 ntBASIC2.61□□□□□ -1.99
TRBV5-4A0A0C4DH59 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.61□□□□□ -1.99
TRBV5-4A0A0C4DH59 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC2.61□□□□□ -1.99
TRBV5-4A0A0C4DH59 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.61□□□□□ -1.99
TRBV5-4A0A0C4DH59 AL163153.1-201ENST00000554223 283 ntBASIC2.61□□□□□ -1.99
TRBV5-4A0A0C4DH59 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.61□□□□□ -1.99
TRBV5-4A0A0C4DH59 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC2.61□□□□□ -1.99
TRBV5-4A0A0C4DH59 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC2.61□□□□□ -1.99
TRBV5-4A0A0C4DH59 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC2.61□□□□□ -1.99
TRBV5-4A0A0C4DH59 AC011471.1-201ENST00000585766 187 ntBASIC2.61□□□□□ -1.99
TRBV5-4A0A0C4DH59 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC2.61□□□□□ -1.99
TRBV5-4A0A0C4DH59 AC174048.1-201ENST00000603389 144 ntBASIC2.61□□□□□ -1.99
TRBV5-4A0A0C4DH59 AC104763.2-201ENST00000604179 382 ntBASIC2.61□□□□□ -1.99
TRBV5-4A0A0C4DH59 HSPE1P7-201ENST00000604681 321 ntBASIC2.61□□□□□ -1.99
TRBV5-4A0A0C4DH59 AC007619.2-201ENST00000605743 379 ntBASIC2.61□□□□□ -1.99
TRBV5-4A0A0C4DH59 AC098614.4-201ENST00000607601 462 ntBASIC2.61□□□□□ -1.99
TRBV5-4A0A0C4DH59 AC099842.1-201ENST00000619919 596 ntBASIC2.61□□□□□ -1.99
TRBV5-4A0A0C4DH59 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.61□□□□□ -1.99
TRBV5-4A0A0C4DH59 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.61□□□□□ -1.99
TRBV5-4A0A0C4DH59 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
TRBV5-4A0A0C4DH59 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.61□□□□□ -1.99
TRBV5-4A0A0C4DH59 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
TRBV5-4A0A0C4DH59 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms