Protein–RNA interactions for Protein: U3KQE9

Uncharacterized protein (Fragment), humanhuman

Predictions only

Length 123 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U3KQE9 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC4.02□□□□□ -1.77
U3KQE9 AL138899.2-201ENST00000439139 499 ntBASIC4.02□□□□□ -1.77
U3KQE9 RPS11P7-201ENST00000442125 465 ntBASIC4.02□□□□□ -1.77
U3KQE9 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC4.02□□□□□ -1.77
U3KQE9 TEX41-209ENST00000451478 452 ntTSL 2 BASIC4.02□□□□□ -1.77
U3KQE9 AF186996.7-201ENST00000492781 209 ntBASIC4.02□□□□□ -1.77
U3KQE9 ENPP7P11-201ENST00000505915 627 ntBASIC4.02□□□□□ -1.77
U3KQE9 AC074133.1-201ENST00000515696 183 ntBASIC4.02□□□□□ -1.77
U3KQE9 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC4.02□□□□□ -1.77
U3KQE9 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.02□□□□□ -1.77
U3KQE9 TRAV28-201ENST00000557548 323 ntBASIC4.02□□□□□ -1.77
U3KQE9 MIR4458-201ENST00000578872 75 ntBASIC4.02□□□□□ -1.77
U3KQE9 MIR4308-201ENST00000580634 81 ntBASIC4.02□□□□□ -1.77
U3KQE9 RN7SL708P-201ENST00000580952 299 ntBASIC4.02□□□□□ -1.77
U3KQE9 AC008521.2-201ENST00000591021 259 ntBASIC4.02□□□□□ -1.77
U3KQE9 AC091953.5-201ENST00000622919 233 ntBASIC4.02□□□□□ -1.77
U3KQE9 AC006065.5-201ENST00000623427 349 ntBASIC4.02□□□□□ -1.77
U3KQE9 AC074101.1-201ENST00000637861 241 ntBASIC4.02□□□□□ -1.77
U3KQE9 AC241585.2-209ENST00000638217 143 ntBASIC4.02□□□□□ -1.77
U3KQE9 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
U3KQE9 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
U3KQE9 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC4.02□□□□□ -1.77
U3KQE9 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
U3KQE9 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
U3KQE9 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
U3KQE9 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
U3KQE9 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
U3KQE9 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC4.02□□□□□ -1.77
U3KQE9 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
U3KQE9 MAPK10-304ENST00000641341 3984 ntBASIC4.02□□□□□ -1.77
U3KQE9 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
U3KQE9 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
U3KQE9 AL109809.4-201ENST00000603520 2185 ntBASIC4.02□□□□□ -1.77
U3KQE9 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.02□□□□□ -1.77
U3KQE9 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.01□□□□□ -1.77
U3KQE9 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC4.01□□□□□ -1.77
U3KQE9 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.01□□□□□ -1.77
U3KQE9 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.01□□□□□ -1.77
U3KQE9 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
U3KQE9 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.01□□□□□ -1.77
U3KQE9 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
U3KQE9 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
U3KQE9 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.01□□□□□ -1.77
U3KQE9 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.01□□□□□ -1.77
U3KQE9 RBBP8P1-201ENST00000449447 1844 ntBASIC4.01□□□□□ -1.77
U3KQE9 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
U3KQE9 RNA5SP361-201ENST00000362686 118 ntBASIC4.01□□□□□ -1.77
U3KQE9 RNU6-527P-201ENST00000363425 104 ntBASIC4.01□□□□□ -1.77
U3KQE9 SNORD115-8-201ENST00000363856 82 ntBASIC4.01□□□□□ -1.77
U3KQE9 Y_RNA.217-201ENST00000364214 105 ntBASIC4.01□□□□□ -1.77
U3KQE9 RN7SKP15-201ENST00000364742 309 ntBASIC4.01□□□□□ -1.77
U3KQE9 RNU6-923P-201ENST00000364753 107 ntBASIC4.01□□□□□ -1.77
U3KQE9 SNORD115-38-201ENST00000365037 82 ntBASIC4.01□□□□□ -1.77
U3KQE9 Y_RNA.319-201ENST00000365138 92 ntBASIC4.01□□□□□ -1.77
U3KQE9 RNU6-1175P-201ENST00000365200 107 ntBASIC4.01□□□□□ -1.77
U3KQE9 RN7SKP81-201ENST00000365603 331 ntBASIC4.01□□□□□ -1.77
U3KQE9 RNU6-20P-201ENST00000384106 107 ntBASIC4.01□□□□□ -1.77
U3KQE9 MIR10B-201ENST00000385011 110 ntBASIC4.01□□□□□ -1.77
U3KQE9 RNU6-1168P-201ENST00000390831 104 ntBASIC4.01□□□□□ -1.77
U3KQE9 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.01□□□□□ -1.77
U3KQE9 AC079780.1-201ENST00000428259 207 ntBASIC4.01□□□□□ -1.77
U3KQE9 AC009238.2-201ENST00000431026 355 ntBASIC4.01□□□□□ -1.77
U3KQE9 AC144530.1-201ENST00000452862 555 ntBASIC4.01□□□□□ -1.77
U3KQE9 Y_RNA.641-201ENST00000459414 105 ntBASIC4.01□□□□□ -1.77
U3KQE9 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC4.01□□□□□ -1.77
U3KQE9 SNORA43.2-201ENST00000516652 128 ntBASIC4.01□□□□□ -1.77
U3KQE9 CYCSP23-201ENST00000519781 313 ntBASIC4.01□□□□□ -1.77
U3KQE9 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.01□□□□□ -1.77
U3KQE9 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.01□□□□□ -1.77
U3KQE9 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.01□□□□□ -1.77
U3KQE9 AC126177.5-201ENST00000549599 178 ntBASIC4.01□□□□□ -1.77
U3KQE9 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC4.01□□□□□ -1.77
U3KQE9 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
U3KQE9 AC069307.1-201ENST00000602820 447 ntBASIC4.01□□□□□ -1.77
U3KQE9 AL589674.2-201ENST00000604304 337 ntBASIC4.01□□□□□ -1.77
U3KQE9 AL590392.1-201ENST00000604960 446 ntBASIC4.01□□□□□ -1.77
U3KQE9 AC090132.2-201ENST00000615881 347 ntBASIC4.01□□□□□ -1.77
U3KQE9 AC006001.4-201ENST00000622243 395 ntBASIC4.01□□□□□ -1.77
U3KQE9 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.01□□□□□ -1.77
U3KQE9 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
U3KQE9 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
U3KQE9 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
U3KQE9 AL022322.2-201ENST00000624072 20397 ntBASIC4.01□□□□□ -1.77
U3KQE9 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
U3KQE9 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
U3KQE9 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
U3KQE9 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4□□□□□ -1.77
U3KQE9 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4□□□□□ -1.77
U3KQE9 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4□□□□□ -1.77
U3KQE9 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
U3KQE9 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
U3KQE9 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4□□□□□ -1.77
U3KQE9 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4□□□□□ -1.77
U3KQE9 Y_RNA.308-201ENST00000365043 101 ntBASIC4□□□□□ -1.77
U3KQE9 RNA5SP235-201ENST00000365411 114 ntBASIC4□□□□□ -1.77
U3KQE9 RNU6-449P-201ENST00000383914 107 ntBASIC4□□□□□ -1.77
U3KQE9 Y_RNA.400-201ENST00000383963 111 ntBASIC4□□□□□ -1.77
U3KQE9 RNU6-281P-201ENST00000384212 103 ntBASIC4□□□□□ -1.77
U3KQE9 RNU6-1145P-201ENST00000384246 107 ntBASIC4□□□□□ -1.77
U3KQE9 Y_RNA.497-201ENST00000384447 98 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms