Protein–RNA interactions for Protein: Q9Y239

NOD1, Nucleotide-binding oligomerization domain-containing protein 1, humanhuman

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1Q9Y239 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
NOD1Q9Y239 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC5.24□□□□□ -1.57
NOD1Q9Y239 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
NOD1Q9Y239 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
NOD1Q9Y239 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
NOD1Q9Y239 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
NOD1Q9Y239 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC5.23□□□□□ -1.57
NOD1Q9Y239 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
NOD1Q9Y239 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
NOD1Q9Y239 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
NOD1Q9Y239 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
NOD1Q9Y239 RNU6-428P-201ENST00000362942 107 ntBASIC5.23□□□□□ -1.57
NOD1Q9Y239 Y_RNA.358-201ENST00000365491 99 ntBASIC5.23□□□□□ -1.57
NOD1Q9Y239 MIR1193-201ENST00000408109 78 ntBASIC5.23□□□□□ -1.57
NOD1Q9Y239 RNU2-71P-201ENST00000411395 189 ntBASIC5.23□□□□□ -1.57
NOD1Q9Y239 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC5.23□□□□□ -1.57
NOD1Q9Y239 AC004975.1-201ENST00000428733 208 ntBASIC5.23□□□□□ -1.57
NOD1Q9Y239 AC007919.1-201ENST00000429380 217 ntBASIC5.23□□□□□ -1.57
NOD1Q9Y239 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.23□□□□□ -1.57
NOD1Q9Y239 AL513124.1-201ENST00000450410 614 ntBASIC5.23□□□□□ -1.57
NOD1Q9Y239 AC079168.2-201ENST00000453977 416 ntBASIC5.23□□□□□ -1.57
NOD1Q9Y239 PRELID3BP1-201ENST00000457142 540 ntBASIC5.23□□□□□ -1.57
NOD1Q9Y239 AC011276.1-201ENST00000469688 323 ntBASIC5.23□□□□□ -1.57
NOD1Q9Y239 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC5.23□□□□□ -1.57
NOD1Q9Y239 AC010469.2-201ENST00000496412 480 ntBASIC5.23□□□□□ -1.57
NOD1Q9Y239 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC5.23□□□□□ -1.57
NOD1Q9Y239 SNORA81.3-201ENST00000517283 198 ntBASIC5.23□□□□□ -1.57
NOD1Q9Y239 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.23□□□□□ -1.57
NOD1Q9Y239 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.23□□□□□ -1.57
NOD1Q9Y239 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.23□□□□□ -1.57
NOD1Q9Y239 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC5.23□□□□□ -1.57
NOD1Q9Y239 AL442163.3-201ENST00000554110 156 ntBASIC5.23□□□□□ -1.57
NOD1Q9Y239 MIR3921-201ENST00000577308 85 ntBASIC5.23□□□□□ -1.57
NOD1Q9Y239 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC5.23□□□□□ -1.57
NOD1Q9Y239 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC5.23□□□□□ -1.57
NOD1Q9Y239 MIR6716-201ENST00000613413 80 ntBASIC5.23□□□□□ -1.57
NOD1Q9Y239 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
NOD1Q9Y239 AC025031.4-201ENST00000621248 3271 ntBASIC5.23□□□□□ -1.57
NOD1Q9Y239 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
NOD1Q9Y239 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
NOD1Q9Y239 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
NOD1Q9Y239 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.23□□□□□ -1.57
NOD1Q9Y239 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.23□□□□□ -1.57
NOD1Q9Y239 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
NOD1Q9Y239 AC009643.2-201ENST00000603543 1448 ntBASIC5.23□□□□□ -1.57
NOD1Q9Y239 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC5.23□□□□□ -1.57
NOD1Q9Y239 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
NOD1Q9Y239 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
NOD1Q9Y239 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC5.22□□□□□ -1.57
NOD1Q9Y239 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.22□□□□□ -1.57
NOD1Q9Y239 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC5.22□□□□□ -1.57
NOD1Q9Y239 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
NOD1Q9Y239 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC5.22□□□□□ -1.57
NOD1Q9Y239 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
NOD1Q9Y239 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
NOD1Q9Y239 RNA5SP509-201ENST00000364577 119 ntBASIC5.22□□□□□ -1.57
NOD1Q9Y239 SNORA12.2-201ENST00000391040 156 ntBASIC5.22□□□□□ -1.57
NOD1Q9Y239 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC5.22□□□□□ -1.57
NOD1Q9Y239 CYP4F29P-201ENST00000420685 446 ntBASIC5.22□□□□□ -1.57
NOD1Q9Y239 AC091286.1-201ENST00000431233 461 ntBASIC5.22□□□□□ -1.57
NOD1Q9Y239 AL358472.1-201ENST00000431295 329 ntBASIC5.22□□□□□ -1.57
NOD1Q9Y239 RPL12P18-201ENST00000437175 325 ntBASIC5.22□□□□□ -1.57
NOD1Q9Y239 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
NOD1Q9Y239 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC5.22□□□□□ -1.57
NOD1Q9Y239 AC013470.1-201ENST00000453438 462 ntBASIC5.22□□□□□ -1.57
NOD1Q9Y239 RNU7-87P-201ENST00000459343 62 ntBASIC5.22□□□□□ -1.57
NOD1Q9Y239 RN7SL517P-201ENST00000462240 305 ntBASIC5.22□□□□□ -1.57
NOD1Q9Y239 AC010618.1-201ENST00000469924 477 ntBASIC5.22□□□□□ -1.57
NOD1Q9Y239 AC010285.1-201ENST00000470580 392 ntBASIC5.22□□□□□ -1.57
NOD1Q9Y239 AC087190.1-201ENST00000484462 480 ntBASIC5.22□□□□□ -1.57
NOD1Q9Y239 AC107032.1-201ENST00000485945 480 ntBASIC5.22□□□□□ -1.57
NOD1Q9Y239 RNA5SP464-201ENST00000516251 108 ntBASIC5.22□□□□□ -1.57
NOD1Q9Y239 Y_RNA.713-201ENST00000517013 96 ntBASIC5.22□□□□□ -1.57
NOD1Q9Y239 SNORA31.19-201ENST00000517079 126 ntBASIC5.22□□□□□ -1.57
NOD1Q9Y239 DEFB108E-201ENST00000524692 240 ntBASIC5.22□□□□□ -1.57
NOD1Q9Y239 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
NOD1Q9Y239 MED28P6-201ENST00000558776 231 ntBASIC5.22□□□□□ -1.57
NOD1Q9Y239 AC074050.1-201ENST00000563247 211 ntBASIC5.22□□□□□ -1.57
NOD1Q9Y239 RNA5SP439-201ENST00000617595 124 ntBASIC5.22□□□□□ -1.57
NOD1Q9Y239 AC068724.3-201ENST00000625906 87 ntBASIC5.22□□□□□ -1.57
NOD1Q9Y239 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
NOD1Q9Y239 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
NOD1Q9Y239 Z73965.1-201ENST00000623412 2297 ntBASIC5.22□□□□□ -1.57
NOD1Q9Y239 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
NOD1Q9Y239 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC5.22□□□□□ -1.57
NOD1Q9Y239 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
NOD1Q9Y239 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
NOD1Q9Y239 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
NOD1Q9Y239 AC010266.2-201ENST00000564741 3255 ntBASIC5.21□□□□□ -1.57
NOD1Q9Y239 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
NOD1Q9Y239 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
NOD1Q9Y239 snoU2_19.2-201ENST00000363024 80 ntBASIC5.21□□□□□ -1.58
NOD1Q9Y239 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
NOD1Q9Y239 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC5.21□□□□□ -1.58
NOD1Q9Y239 Y_RNA.405-201ENST00000383979 100 ntBASIC5.21□□□□□ -1.58
NOD1Q9Y239 Y_RNA.439-201ENST00000384119 94 ntBASIC5.21□□□□□ -1.58
NOD1Q9Y239 Y_RNA.451-201ENST00000384200 100 ntBASIC5.21□□□□□ -1.58
NOD1Q9Y239 Y_RNA.462-201ENST00000384268 102 ntBASIC5.21□□□□□ -1.58
NOD1Q9Y239 Y_RNA.524-201ENST00000384564 100 ntBASIC5.21□□□□□ -1.58
NOD1Q9Y239 Y_RNA.555-201ENST00000384673 110 ntBASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms