Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
LHX6Q9UPM6 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
LHX6Q9UPM6 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.57□□□□□ -1.52
LHX6Q9UPM6 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.57□□□□□ -1.52
LHX6Q9UPM6 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
LHX6Q9UPM6 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.57□□□□□ -1.52
LHX6Q9UPM6 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
LHX6Q9UPM6 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
LHX6Q9UPM6 AC068769.1-201ENST00000474767 2426 ntBASIC5.57□□□□□ -1.52
LHX6Q9UPM6 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
LHX6Q9UPM6 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
LHX6Q9UPM6 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
LHX6Q9UPM6 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
LHX6Q9UPM6 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC5.57□□□□□ -1.52
LHX6Q9UPM6 Y_RNA.85-201ENST00000363014 111 ntBASIC5.57□□□□□ -1.52
LHX6Q9UPM6 RNU6-813P-201ENST00000384691 107 ntBASIC5.57□□□□□ -1.52
LHX6Q9UPM6 RPL35AP3-201ENST00000414680 288 ntBASIC5.57□□□□□ -1.52
LHX6Q9UPM6 AC012306.1-201ENST00000423267 114 ntBASIC5.57□□□□□ -1.52
LHX6Q9UPM6 AL590399.6-201ENST00000446396 307 ntBASIC5.57□□□□□ -1.52
LHX6Q9UPM6 RPL10P17-201ENST00000453852 316 ntBASIC5.57□□□□□ -1.52
LHX6Q9UPM6 RPS29P33-201ENST00000456717 146 ntBASIC5.57□□□□□ -1.52
LHX6Q9UPM6 RN7SKP234-201ENST00000517173 224 ntBASIC5.57□□□□□ -1.52
LHX6Q9UPM6 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.57□□□□□ -1.52
LHX6Q9UPM6 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC5.57□□□□□ -1.52
LHX6Q9UPM6 AL121603.1-201ENST00000553815 142 ntBASIC5.57□□□□□ -1.52
LHX6Q9UPM6 AC019159.1-201ENST00000605094 187 ntBASIC5.57□□□□□ -1.52
LHX6Q9UPM6 AC009831.4-201ENST00000620744 325 ntBASIC5.57□□□□□ -1.52
LHX6Q9UPM6 AC091953.3-201ENST00000623220 236 ntBASIC5.57□□□□□ -1.52
LHX6Q9UPM6 CCT7-217ENST00000626868 249 ntTSL 5 BASIC5.57□□□□□ -1.52
LHX6Q9UPM6 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.57□□□□□ -1.52
LHX6Q9UPM6 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.57□□□□□ -1.52
LHX6Q9UPM6 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
LHX6Q9UPM6 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC5.57□□□□□ -1.52
LHX6Q9UPM6 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
LHX6Q9UPM6 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
LHX6Q9UPM6 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.57□□□□□ -1.52
LHX6Q9UPM6 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
LHX6Q9UPM6 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
LHX6Q9UPM6 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
LHX6Q9UPM6 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
LHX6Q9UPM6 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
LHX6Q9UPM6 AC110373.1-201ENST00000505994 3505 ntBASIC5.56□□□□□ -1.52
LHX6Q9UPM6 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
LHX6Q9UPM6 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
LHX6Q9UPM6 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC5.56□□□□□ -1.52
LHX6Q9UPM6 RNU6-799P-201ENST00000363567 107 ntBASIC5.56□□□□□ -1.52
LHX6Q9UPM6 Y_RNA.544-201ENST00000384650 113 ntBASIC5.56□□□□□ -1.52
LHX6Q9UPM6 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.56□□□□□ -1.52
LHX6Q9UPM6 Y_RNA.622-201ENST00000411091 108 ntBASIC5.56□□□□□ -1.52
LHX6Q9UPM6 AL096829.1-201ENST00000413677 457 ntBASIC5.56□□□□□ -1.52
LHX6Q9UPM6 CYP4F29P-201ENST00000420685 446 ntBASIC5.56□□□□□ -1.52
LHX6Q9UPM6 AC007919.1-201ENST00000429380 217 ntBASIC5.56□□□□□ -1.52
LHX6Q9UPM6 AL356867.1-201ENST00000429623 299 ntBASIC5.56□□□□□ -1.52
LHX6Q9UPM6 AC009237.8-201ENST00000445492 379 ntBASIC5.56□□□□□ -1.52
LHX6Q9UPM6 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC5.56□□□□□ -1.52
LHX6Q9UPM6 RPS23P6-201ENST00000466136 431 ntBASIC5.56□□□□□ -1.52
LHX6Q9UPM6 RPS21P4-201ENST00000487122 248 ntBASIC5.56□□□□□ -1.52
LHX6Q9UPM6 AC093815.1-201ENST00000508637 280 ntBASIC5.56□□□□□ -1.52
LHX6Q9UPM6 RNU6ATAC17P-201ENST00000516074 71 ntBASIC5.56□□□□□ -1.52
LHX6Q9UPM6 RNU6-1256P-201ENST00000516539 103 ntBASIC5.56□□□□□ -1.52
LHX6Q9UPM6 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.56□□□□□ -1.52
LHX6Q9UPM6 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC5.56□□□□□ -1.52
LHX6Q9UPM6 TOMM20P2-201ENST00000540082 421 ntBASIC5.56□□□□□ -1.52
LHX6Q9UPM6 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.56□□□□□ -1.52
LHX6Q9UPM6 PRELID2P1-201ENST00000552837 301 ntBASIC5.56□□□□□ -1.52
LHX6Q9UPM6 CYCSP39-201ENST00000565821 309 ntBASIC5.56□□□□□ -1.52
LHX6Q9UPM6 CYP4A27P-201ENST00000567218 190 ntBASIC5.56□□□□□ -1.52
LHX6Q9UPM6 FAM25E-202ENST00000608562 189 ntBASIC5.56□□□□□ -1.52
LHX6Q9UPM6 TCL6_3.1-201ENST00000619064 137 ntBASIC5.56□□□□□ -1.52
LHX6Q9UPM6 AC134878.1-201ENST00000619901 243 ntBASIC5.56□□□□□ -1.52
LHX6Q9UPM6 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
LHX6Q9UPM6 AL450326.2-201ENST00000421913 1962 ntBASIC5.56□□□□□ -1.52
LHX6Q9UPM6 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC5.56□□□□□ -1.52
LHX6Q9UPM6 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
LHX6Q9UPM6 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
LHX6Q9UPM6 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
LHX6Q9UPM6 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.55□□□□□ -1.52
LHX6Q9UPM6 AC083837.1-201ENST00000565297 2994 ntBASIC5.55□□□□□ -1.52
LHX6Q9UPM6 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
LHX6Q9UPM6 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
LHX6Q9UPM6 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
LHX6Q9UPM6 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
LHX6Q9UPM6 AC006206.1-201ENST00000544842 3387 ntBASIC5.55□□□□□ -1.52
LHX6Q9UPM6 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
LHX6Q9UPM6 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
LHX6Q9UPM6 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
LHX6Q9UPM6 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.55□□□□□ -1.52
LHX6Q9UPM6 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC5.55□□□□□ -1.52
LHX6Q9UPM6 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
LHX6Q9UPM6 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC5.55□□□□□ -1.52
LHX6Q9UPM6 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
LHX6Q9UPM6 RNA5SP305-201ENST00000362665 119 ntBASIC5.55□□□□□ -1.52
LHX6Q9UPM6 RNA5SP319-201ENST00000362768 119 ntBASIC5.55□□□□□ -1.52
LHX6Q9UPM6 SNORD56.1-201ENST00000362913 68 ntBASIC5.55□□□□□ -1.52
LHX6Q9UPM6 Y_RNA.220-201ENST00000364244 109 ntBASIC5.55□□□□□ -1.52
LHX6Q9UPM6 RNA5SP478-201ENST00000364657 115 ntBASIC5.55□□□□□ -1.52
LHX6Q9UPM6 SNORA62-201ENST00000365493 153 ntBASIC5.55□□□□□ -1.52
LHX6Q9UPM6 AL357515.1-201ENST00000402967 542 ntBASIC5.55□□□□□ -1.52
LHX6Q9UPM6 AC016739.1-201ENST00000405359 345 ntBASIC5.55□□□□□ -1.52
LHX6Q9UPM6 RN7SKP100-201ENST00000411258 284 ntBASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms