Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
BLOC1S4Q9NUP1 TEX21P-201ENST00000447107 1476 ntBASIC3.26□□□□□ -1.89
BLOC1S4Q9NUP1 AC026241.1-201ENST00000517873 2142 ntBASIC3.26□□□□□ -1.89
BLOC1S4Q9NUP1 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.25□□□□□ -1.89
BLOC1S4Q9NUP1 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
BLOC1S4Q9NUP1 RNU1-35P-201ENST00000362782 153 ntBASIC3.25□□□□□ -1.89
BLOC1S4Q9NUP1 SNORA9-201ENST00000384215 133 ntBASIC3.25□□□□□ -1.89
BLOC1S4Q9NUP1 RNU6-658P-201ENST00000384606 106 ntBASIC3.25□□□□□ -1.89
BLOC1S4Q9NUP1 AC090960.1-201ENST00000421072 306 ntBASIC3.25□□□□□ -1.89
BLOC1S4Q9NUP1 AL109913.1-201ENST00000421173 514 ntBASIC3.25□□□□□ -1.89
BLOC1S4Q9NUP1 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC3.25□□□□□ -1.89
BLOC1S4Q9NUP1 AC104332.2-201ENST00000429959 156 ntBASIC3.25□□□□□ -1.89
BLOC1S4Q9NUP1 AC098826.1-201ENST00000433943 471 ntBASIC3.25□□□□□ -1.89
BLOC1S4Q9NUP1 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.25□□□□□ -1.89
BLOC1S4Q9NUP1 AC003071.1-201ENST00000451219 789 ntBASIC3.25□□□□□ -1.89
BLOC1S4Q9NUP1 AC117522.1-201ENST00000509821 380 ntBASIC3.25□□□□□ -1.89
BLOC1S4Q9NUP1 AC010486.3-201ENST00000511602 785 ntBASIC3.25□□□□□ -1.89
BLOC1S4Q9NUP1 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC3.25□□□□□ -1.89
BLOC1S4Q9NUP1 AC022447.1-201ENST00000515358 464 ntBASIC3.25□□□□□ -1.89
BLOC1S4Q9NUP1 RNU2-46P-201ENST00000517038 113 ntBASIC3.25□□□□□ -1.89
BLOC1S4Q9NUP1 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.25□□□□□ -1.89
BLOC1S4Q9NUP1 AP003122.3-201ENST00000526316 255 ntBASIC3.25□□□□□ -1.89
BLOC1S4Q9NUP1 AC084851.1-201ENST00000529105 249 ntBASIC3.25□□□□□ -1.89
BLOC1S4Q9NUP1 AP002404.1-201ENST00000532005 451 ntBASIC3.25□□□□□ -1.89
BLOC1S4Q9NUP1 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC3.25□□□□□ -1.89
BLOC1S4Q9NUP1 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.25□□□□□ -1.89
BLOC1S4Q9NUP1 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.25□□□□□ -1.89
BLOC1S4Q9NUP1 Z99571.1-201ENST00000636677 394 ntBASIC3.25□□□□□ -1.89
BLOC1S4Q9NUP1 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
BLOC1S4Q9NUP1 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
BLOC1S4Q9NUP1 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
BLOC1S4Q9NUP1 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.25□□□□□ -1.89
BLOC1S4Q9NUP1 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
BLOC1S4Q9NUP1 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.24□□□□□ -1.89
BLOC1S4Q9NUP1 ADAM3A-203ENST00000461344 2157 ntBASIC3.24□□□□□ -1.89
BLOC1S4Q9NUP1 U8.3-201ENST00000363321 132 ntBASIC3.24□□□□□ -1.89
BLOC1S4Q9NUP1 RNY4P34-201ENST00000364779 95 ntBASIC3.24□□□□□ -1.89
BLOC1S4Q9NUP1 MIR558-201ENST00000384920 94 ntBASIC3.24□□□□□ -1.89
BLOC1S4Q9NUP1 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
BLOC1S4Q9NUP1 SNORA48.5-201ENST00000391143 135 ntBASIC3.24□□□□□ -1.89
BLOC1S4Q9NUP1 AL122016.1-201ENST00000403365 367 ntBASIC3.24□□□□□ -1.89
BLOC1S4Q9NUP1 AL138885.1-201ENST00000405921 675 ntBASIC3.24□□□□□ -1.89
BLOC1S4Q9NUP1 RNU2-39P-201ENST00000410604 198 ntBASIC3.24□□□□□ -1.89
BLOC1S4Q9NUP1 RNU2-49P-201ENST00000410666 184 ntBASIC3.24□□□□□ -1.89
BLOC1S4Q9NUP1 RN7SKP58-201ENST00000411010 305 ntBASIC3.24□□□□□ -1.89
BLOC1S4Q9NUP1 AC023141.4-201ENST00000412031 328 ntBASIC3.24□□□□□ -1.89
BLOC1S4Q9NUP1 AC007283.2-201ENST00000424739 197 ntBASIC3.24□□□□□ -1.89
BLOC1S4Q9NUP1 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.24□□□□□ -1.89
BLOC1S4Q9NUP1 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC3.24□□□□□ -1.89
BLOC1S4Q9NUP1 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.24□□□□□ -1.89
BLOC1S4Q9NUP1 AL139132.1-201ENST00000431587 344 ntBASIC3.24□□□□□ -1.89
BLOC1S4Q9NUP1 RPL23AP30-201ENST00000432419 501 ntBASIC3.24□□□□□ -1.89
BLOC1S4Q9NUP1 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.24□□□□□ -1.89
BLOC1S4Q9NUP1 OSTCP8-201ENST00000445117 448 ntBASIC3.24□□□□□ -1.89
BLOC1S4Q9NUP1 AC009961.3-201ENST00000449832 765 ntBASIC3.24□□□□□ -1.89
BLOC1S4Q9NUP1 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.24□□□□□ -1.89
BLOC1S4Q9NUP1 S100A11P2-201ENST00000467589 312 ntBASIC3.24□□□□□ -1.89
BLOC1S4Q9NUP1 RPS26P21-201ENST00000475397 348 ntBASIC3.24□□□□□ -1.89
BLOC1S4Q9NUP1 MRPS36P2-201ENST00000512569 299 ntBASIC3.24□□□□□ -1.89
BLOC1S4Q9NUP1 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.24□□□□□ -1.89
BLOC1S4Q9NUP1 RNU6-1315P-201ENST00000517187 99 ntBASIC3.24□□□□□ -1.89
BLOC1S4Q9NUP1 SNORA31.26-201ENST00000517250 137 ntBASIC3.24□□□□□ -1.89
BLOC1S4Q9NUP1 MTND2P38-201ENST00000522536 667 ntBASIC3.24□□□□□ -1.89
BLOC1S4Q9NUP1 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
BLOC1S4Q9NUP1 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
BLOC1S4Q9NUP1 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.24□□□□□ -1.89
BLOC1S4Q9NUP1 AC007151.1-201ENST00000572774 483 ntBASIC3.24□□□□□ -1.89
BLOC1S4Q9NUP1 AC137800.2-201ENST00000574375 120 ntBASIC3.24□□□□□ -1.89
BLOC1S4Q9NUP1 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.24□□□□□ -1.89
BLOC1S4Q9NUP1 AC011471.1-201ENST00000585766 187 ntBASIC3.24□□□□□ -1.89
BLOC1S4Q9NUP1 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.24□□□□□ -1.89
BLOC1S4Q9NUP1 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
BLOC1S4Q9NUP1 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
BLOC1S4Q9NUP1 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
BLOC1S4Q9NUP1 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.24□□□□□ -1.89
BLOC1S4Q9NUP1 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.24□□□□□ -1.89
BLOC1S4Q9NUP1 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.24□□□□□ -1.89
BLOC1S4Q9NUP1 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.24□□□□□ -1.89
BLOC1S4Q9NUP1 AL353743.1-202ENST00000431724 1695 ntBASIC3.24□□□□□ -1.89
BLOC1S4Q9NUP1 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
BLOC1S4Q9NUP1 U3.4-201ENST00000363352 213 ntBASIC3.23□□□□□ -1.89
BLOC1S4Q9NUP1 RNU6-188P-201ENST00000364207 107 ntBASIC3.23□□□□□ -1.89
BLOC1S4Q9NUP1 RN7SKP226-201ENST00000364912 300 ntBASIC3.23□□□□□ -1.89
BLOC1S4Q9NUP1 Y_RNA.333-201ENST00000365274 102 ntBASIC3.23□□□□□ -1.89
BLOC1S4Q9NUP1 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
BLOC1S4Q9NUP1 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.23□□□□□ -1.89
BLOC1S4Q9NUP1 Y_RNA.534-201ENST00000384599 112 ntBASIC3.23□□□□□ -1.89
BLOC1S4Q9NUP1 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.23□□□□□ -1.89
BLOC1S4Q9NUP1 USP9YP6-201ENST00000413550 854 ntBASIC3.23□□□□□ -1.89
BLOC1S4Q9NUP1 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.23□□□□□ -1.89
BLOC1S4Q9NUP1 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC3.23□□□□□ -1.89
BLOC1S4Q9NUP1 RPL7P37-201ENST00000425095 738 ntBASIC3.23□□□□□ -1.89
BLOC1S4Q9NUP1 RPL35AP12-201ENST00000425362 338 ntBASIC3.23□□□□□ -1.89
BLOC1S4Q9NUP1 AC093106.2-201ENST00000428212 385 ntBASIC3.23□□□□□ -1.89
BLOC1S4Q9NUP1 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC3.23□□□□□ -1.89
BLOC1S4Q9NUP1 AC073614.1-201ENST00000438690 650 ntBASIC3.23□□□□□ -1.89
BLOC1S4Q9NUP1 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.23□□□□□ -1.89
BLOC1S4Q9NUP1 FABP5P13-201ENST00000452144 328 ntBASIC3.23□□□□□ -1.89
BLOC1S4Q9NUP1 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.23□□□□□ -1.89
BLOC1S4Q9NUP1 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms